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VDAC1: from structure to cancer therapy

Varda Shoshan-Barmatz, Dario Mizrachi

Frontiers in Oncology · 2012

doi:10.3389/fonc.2012.00164

Abstract

Here, we review current evidence pointing to the function of VDAC1 in cell life and death, and highlight these functions in relation to cancer. Found at the outer mitochondrial membrane, VDAC1 assumes a crucial position in the cell, controlling the metabolic cross-talk between mitochondria and the rest of the cell. Moreover, its location at the boundary between the mitochondria and the cytosol enables VDAC1 to interact with proteins that mediate and regulate the integration of mitochondrial functions with other cellular activities. As a metabolite transporter, VDAC1 contributes to the metabolic phenotype of cancer cells. This is reflected by VDAC1 over-expression in many cancer types, and by inhibition of tumor development upon silencing VDAC1 expression. Along with regulating cellular energy production and metabolism, VDAC1 is also a key protein in mitochondria-mediated apoptosis, participating in the release of apoptotic proteins and interacting with anti-apoptotic proteins. The involvement of VDAC1 in the release of apoptotic proteins located in the inter-membranal space is discussed, as is VDAC1 oligomerization as an important step in apoptosis induction. VDAC also serves as an anchor point for mitochondria-interacting proteins, some of which are also highly expressed in many cancers, such as hexokinase (HK), Bcl2, and Bcl-xL. By binding to VDAC, HK provides both metabolic benefit and apoptosis-suppressive capacity that offers the cell a proliferative advantage and increases its resistance to chemotherapy. VDAC1-based peptides that bind specifically to HK, Bcl2, or Bcl-xL abolished the cell's abilities to bypass the apoptotic pathway. Moreover, these peptides promote cell death in a panel of genetically characterized cell lines derived from different human cancers. These and other functions point to VDAC1 as a rational target for the development of a new generation of therapeutics.

Full text

From PubMed Central, U.S. National Library of Medicine, as current on Oct 21, 2026. Paragraph numbers are ours, so an answer can point at one.

OVERVIEW

Research over the past decade has extended the prevailing view of the mitochondrion to include functions well beyond the critical bioenergetics role of supplying ATP to include cell signaling events, inter-organellar communication, aging, cell proliferation, a target in disease, and apoptosis. Mitochondria thus play a central role in the regulation of apoptosis and serve as the venue for cellular decisions leading to cell life or death. One of the mitochondrial proteins controlling cell life and death is the voltage-dependent anion channel (VDAC), also known as mitochondrial porin. VDAC, located in the mitochondrial outer membrane, functions as gatekeeper for the entry and exit of mitochondrial metabolites, thereby controlling cross-talk between mitochondria and the rest of the cell. VDAC is also a key player in mitochondria-mediated apoptosis. Thus, in addition to regulating the metabolic and energetic functions of mitochondria, VDAC appears to act as a convergence point for a variety of cell survival and cell death signals, mediated by its association with various ligands and proteins. The focus of this review will be on the central role of VDAC in cell life and death, addressing VDAC function in the regulation of mitochondria-mediated apoptosis, with an emphasis on structure–function relationships. Understanding VDAC structure–function relationships is critical for deciphering how this channel can perform such a variety of functions, all important for cell life and death. Finally, this review will also provide insight into VDAC function in Ca2+ homeostasis, protection against oxidative stress, regulation of apoptosis, and involvement in several diseases, as well as its role in the action of different drugs.

VDAC ISOFORMS

In mammals, three homologous genes encode three VDAC isoforms, namely VDAC1, VDAC2, and VDAC3. The three proteins have similar molecular weights (30–35 kDa), each shares approximately 70% identity, and all three can be found in most tissues, albeit in different amounts, with the most abundant sub-type being VDAC1 and the least common form being VDAC3. VDAC1 and VDAC2 but not VDAC3 can form a channel upon reconstitution into an artificial lipid bilayer, with VDAC1 showing voltage-gated high conductance channel properties (see Channel Activity of VDAC1). VDAC2 also presents normal gating activity, while VDAC3 does not insert readily into membranes and generally does not gate well, even at high membrane potentials (up to 80 mV;; ).

The specific role of each VDAC isoform remains unclear, although evidence indicates that they serve different physiologic functions. For example, the absence of VDAC1 caused multiple defects in respiratory complex activities in both skeletal and cardiac muscle, while in VDAC3-deficient mice, these defects are restricted to the heart, suggesting that in vivo, these two isoforms fulfill distinct physiologic roles. In mice, vdac1 and vdac2 deletion reduces respiratory capacity, the absence of VDAC3 causes male sterility, and a lack of both VDAC1 and VDAC3 causes inhibited growth. Furthermore, it was demonstrated that VDAC1- and VDAC3-lacking mice show deficits in learning behavior and synaptic plasticity. VDAC3-lacking mice were male-infertile because their mitochondria and the axoneme of their sperm are structurally altered. Finally, vdac1- and vdac3-deficient mice are viable, whereas embryos with a homozygous deletion of vdac2 die during development.

VDAC1 interacts with different proteins and factors, such as hexokinase (HK; ) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH; ), while biochemical data indicate that VDAC1 but not VDAC2 binds HK. This, however, has been questioned. Lately, it was demonstrated that HK-I and VDAC3 exhibit a higher degree of mitochondrial co-localization than does HK-I with either VDAC1 or VDAC2.

Large proteomic surveys and other studies have shown that all three VDAC isoforms are subject to both phosphorylation and acetylation at multiple sites. Analysis of the amino acid sequence of VDAC1 showed that the first methionine is deleted, while the second amino acid, an alanine, is acetylated. Among the other post-translation modifications VDAC1 undergoes are phosphorylation of serine, threonine, and tyrosine residues and acetylation of lysines. Recently glycogen synthase kinase 3 (GSK3)-mediated VDAC phosphorylation was reported, allowing for control of outer mitochondrial membrane (OMM) permeabilization in hepatosteatosis. Currently, the effects of these modifications on VDAC activity are not clear.

VDAC LOCATION AND METABOLITE TRANSPORT

VDAC is localized to the OMM of all eukaryotes, where it assumes a crucial position in the cell, serving as the main interface between mitochondrial and cellular metabolisms. VDAC is permeable to uncharged molecules up to ∼5,000 Da in the open configuration, mediating the flux of ions, nucleotides and other metabolites across the OMM (; Figure 1). In keeping with its two-way trafficking role, VDAC1 enables substrates, including pyruvate, malate, succinate, and NADH, to enter the mitochondria and mediates the exit of newly formed molecules, such as hemes. Hence, down-regulation of VDAC1 expression results in reduced metabolite exchange between mitochondria and the cytosol, making VDAC1 essential for energy production and cell growth. Similarly, alterations in mitochondrial function are linked to VDAC closure, which limits the normal flow of metabolites in and out of mitochondria. VDAC1, at the OMM, is also involved in the entry and exit of Ca2+ (see VDAC1 Transport of Ca2+ and Function in ER-mitochondria Cross-talk). VDAC, furthermore, functions in cholesterol transport across the OMM. Indeed, VDAC has been proposed to be a necessary component of a protein complex involved in mitochondrial membrane cholesterol distribution and transport and to play an important role in altered cholesterol synthesis and transport in Morris hepatoma cells.

Given its location at the boundary between the mitochondria and the cytosol, VDAC1 is able to interact with proteins that mediate and regulate the integration of mitochondrial functions with other cellular activities. VDAC1 interacts with HK and creatine kinase to convert newly generated ATP into high-energy storage forms, like glucose-6-phosphate (G-6-P) and creatine phosphate, in brain and muscle, respectively. The over-expression of VDAC1 in some cancer cells may be related to its multi-functional activities, as required by high energy-demanding cells (; see VDAC Expression Levels in Cancers and Enhancement by Pro-apoptotic Drugs).

Thus, VDAC is a dynamic regulator of global mitochondrial function both in health and disease.

EXTRA-MITOCHONDRIAL LOCALIZATION OF VDAC

VDAC1 was once thought to be localized solely to the OMM. Indeed, although VDAC is present in abundance in the OMM, various studies have revealed that VDAC is also localized to cell compartments other than mitochondria. VDAC, first isolated from human plasma membrane lymphocytes, was subsequently detected in other cells of various tissues. A splice variant of the mitochondrial VDAC1 gene encoding a leader peptide of 13 amino acids at the NH2 terminus was detected and termed plasmalemmal VDAC1 (pl-VDAC1; ). The protein from this splice variant exhibited extra-mitochondrial trafficking to the endoplasmic reticulum (ER), the Golgi apparatus, and the plasma membrane. Caveolae and caveolae-like domains were shown to contain VDAC. The extra-mitochondrial localization of VDAC in bovine outer dense fibers, a cytoskeletal component of the sperm flagellum, has been reported. VDAC2 was shown to be present in the membrane components of human spermatozoa. The presence of VDAC in the sarcoplasmic reticulum (SR) of amphibian and mammalian skeletal muscle and in the ER of rat cerebellum has also been demonstrated.

The exact functions of the extra-mitochondrial VDAC are as yet unknown. pl-VDAC1 was suggested to facilitate regulatory volume decrease in epithelial cells and to play a role in cellular ATP release and volume control. The possible functions of VDAC in the SR/ER include providing a pathway for transport of Ca2+, nucleotides and other metabolites across the membrane, and involvement in apoptosis. The participation of VDAC in supra-molecular complexes and intracellular communication, including calcium signal delivery between the ER and mitochondria, has also been postulated (; see VDAC1 Transport of Ca2+ and Function in ER-mitochondria Cross-talk).

VDAC CONDUCTANCE, ION SELECTIVITY, AND VOLTAGE-DEPENDENT CHANNEL GATING

The channel properties of VDAC1 have been examined following reconstitution of the purified protein into a planar lipid bilayer (PLB). VDAC1 has been purified using various procedures and detergents. Bilayer-reconstituted VDAC1 assumes multiple voltage-dependent conformational states, displaying different selectivities and permeabilities. VDAC1 shows symmetrical bell-shaped voltage-dependent conductance with the highest conductance (4 nS at 1 M KCl) at low potentials of -20 to +20 mV (;; Figure 2). At low potentials, when in the fully open state, VDAC1 selectively conducts small ions (e.g., Cl–, K+, Na+), yet shows a preference for anions, such as phosphate, chloride, adenine nucleotides, glutamate, and other anionic metabolites, and large cations, such as acetylcholine, dopamine, and Tris. At higher positive or negative potentials (>30–60 mV), the channel conductance is reduced and the selectivity shifts to small cations. In this scenario, the channel becomes virtually impermeable to ATP and ADP.

As a voltage-gated channel, VDAC1 must possess a voltage sensor to respond to changes in transmembrane voltage. It is believed that VDAC1 channels rely on two separate gating processes, one that occurs at positive transmembrane potentials and the other at negative potentials. The N-terminal α-helical segment of the channel has been proposed to act as the voltage sensor, gating the pore via conformational changes and/or movements (see The N-terminal Region of VDAC1: Location, Translocation and Channel Gating). Clearly, the molecular nature of VDAC1 gating mechanism has not yet been resolved.

VDAC CHANNEL MODULATORS AND INHIBITORS

Despite the critical involvement of VDAC1 in various mitochondrial functions, little is known of how VDAC is regulated. Accumulated evidence suggests that VDAC1 function is modulated by various physiological ligands, such as glutamate, adenine nucleotides, NADH, and non-physiological compounds, such as Koenig’s polyanion, ruthenium red (RuR), dicyclohexylcarbodiimide (DCCD), and 4,4′-diisothiocyanatostilbene-2,2′-disulfonic acid (DIDS; ).

NADH was found to regulate the gating of mammalian, fungal, and plant VDAC. For mammalian VDAC1, molecular and biochemical evidence indicates that the protein possesses one or more nucleotide-binding site(s). Glutamate specifically, but not aspartate or GABA, eliminates the bell shape of VDAC voltage-dependence channel conductance. Accumulating evidence also suggests that VDAC possesses regulatory binding sites for Ca2+ (reviewed in; ).

Various compounds targeting apoptotic cell death or cell proliferation were found to mediate their activity via interaction with VDAC1, modulating VDAC1 activity (see VDAC as a Pharmacological Target for Compounds Affecting Cell Proliferation or Apoptosis). In addition, VDAC1, acting as a docking site for various proteins, is regulated via protein–protein interactions. Specifically, HK, Bcl2, Bcl-xL, actin, and tubulin were found to interact with VDAC1 and alter its channel conductance (see VDAC1 Association with Proteins and Cancer).

Finally, high cholesterol, known to reduce the activity of membrane-associated proteins, was found to inhibit channel conductance and the metabolic function of VDAC. It has also been reported that plant VDAC undergoes a reversible regulation of selectivity and voltage-dependence in the presence of sterols.

VDAC STRUCTURE–FUNCTION RELATIONSHIPS

Since their discovery in the mid-1970s, great efforts have been devoted to understanding structure–function relationships of VDACs using numerous techniques, including circular dichroism (CD), atomic force microscopy (AFM), electron microscopy, NMR, crystallography, and others.

THE THREE-DIMENSIONAL STRUCTURE OF hVDAC1

VDAC1 is a polypeptide of 283 amino acids with Met1 missing in the mature protein. Various studies have led to the development of models postulating the transmembrane organization of VDAC1, comprising a single α-helix at the N-terminus and 13, 16, or 19 transbilayer β-strands that form a β-barrel.

Recently, the 3D structure of recombinant VDAC1 was solved using X-ray crystallography, NMR and a combination of the two. Such studies presented VDAC1 as composed of 19 β-strands arranged as a barrel, with strands β1 and β19 being in parallel conformation (Figure 3;;; ). The N-terminal domain of VDAC1, consisting of 25 amino acids, was shown to be very dynamic and possesses different degrees of α-helical content in each of the three proposed structures. All three methods employed refolded recombinant VDAC1 expressed in E. coli and purified from inclusion bodies. As such, it has been argued that the refolding conditions employed led to the appearance of non-native structures, as biochemical and biophysical approaches argue for the existence of additional extra-membranal VDAC regions.

The pore diameter of the channel has been estimated to be between 3 and 3.8 nm, based on biochemical and structural methods and about 1.5 nm when the N-terminal α-helix is located inside the channel, according to the recent 3D studies. Finally, there is evidence that cholesterol is bound to mammalian mitochondrial VDAC and sterols seem to be important for the folding of VDAC.

THE N-TERMINAL REGION OF VDAC1: LOCATION, TRANSLOCATION, AND CHANNEL GATING

The location of the N-terminal region of VDAC1 with respect to the pore, its role in voltage-gating and its interaction with associated proteins have been the focus of intensive study, as described below.

Location and translocation of the N-terminal region

The VDAC N-terminal region was proposed to lie on the membrane surface, to be exposed to the cytoplasm or to cross the membrane. The 3D structures of recombinant VDAC1, however, revealed that the N-terminal domain is located inside the channel pore, causing a partial obstruction of the wide pore, possibly providing structural reinforcement to the channel walls (;;;; Figure 3). Deletion of the N-terminal helical domain did not affect the correct mitochondrial targeting of the protein.

Various studies suggesting that the N-terminal region of VDAC1 constitutes a mobile component of the protein (see VDAC1 N-terminal Domain Function in Voltage-gating and Cell Death). In 2D crystals of Neurospora crassa VDAC1, oblique arrays of the N-terminal domain appear to extend laterally from the barrel, into the aqueous phase. The N-terminus of the protein was shown to be accessible to anti-VDAC1 antibodies raised against this part of the protein. The same domain is exposed to kinases, as threonine-13 undergoes phosphorylation. Additionally, the N-terminal domain of VDAC1 interacts with cytosolic proteins and acts as a recruiting site for HK1, Bcl2, and Bcl-xL and thus is a key structural feature mediating VDAC interaction with anti-apoptotic proteins to enable their function, suggesting that this VDAC region is exposed outside the pore. Finally, a recent in silico study supports the role of the N-terminal in controlling shape and permeability of the channel. In the absence of N-terminal, increased overall β-barrel motion, resulting in elliptic, semi-collapsed barrel shapes, is seen.

Taken together, these findings suggest that the N-terminal region of VDAC1 is loosely attached to the barrel wall and can undergo translocation to become exposed at the membrane surface. This movement allows VDAC1 to interact with the anti-apoptotic proteins, HK, Bcl-xL, and Bcl2, and may participate in VDAC1 oligomerization. The signal and nature of conformational changes inducing VDAC1 N-terminal region translocation, both under physiological and apoptotic conditions, await further study.

VDAC1 glycine-rich sequence

It was reported that in VDAC1, a glycine-rich sequence (GXXXG), highly conserved in mammals, connects the N-terminal domain to the β-barrel, thus providing the flexibility needed for N-terminal translocation in and out of the pore. When this flexible region is mutated by replacing glycines with prolines, the N-terminal region favors a location out of the pore, thereby affecting channel gating. Moreover, in such mutants, the ability to form VDAC1 dimers was highly increased. The GXXXG motif has been linked with dimerization in proteins such as glycophorin A, human carbonic anhydrase, yeast ATP synthase, carnitine palmitoyltransferase (, and others). In VDAC1, this motif is not required for VDAC1 dimerization but may be involved in interaction with VDAC1-associated proteins. Interestingly, such a motif in Bcl-xL, interacting with VDAC1, has been recently suggested to mediate VDAC interaction with other proteins.

VDAC1 N-terminal domain function in voltage-gating and cell death

It was reported that during voltage-gating or interaction with molecules, such as cytochrome c (Cyto c), some motion of VDAC occurred. N-terminal-truncated mV DAC1 was shown to exhibit high conductance at all tested voltages and was proposed to be a main effector in those apoptotic events dependent on VDAC1. Using recombinant mutated VDAC1 with the N-terminal cross-linked to channel wall, it was shown that voltage-gating was modified but not completely lost. On the other hand, mobility of the N-terminal region and the contribution of this domain to channel gating and interaction with anti-apoptotic proteins were recently demonstrated using site-directed mutagenesis and cysteine substitution, together with a thiol-specific cross-linker. Swapping the N-terminal domain of VDAC1 and with that of VDAC3 restores full activity of the channel.

Different models for the voltage-dependent gating of VDAC1 via the N-terminal region have been proposed: (i) Blockage of the pore by movement of the N-terminal domain within the lumen from the barrel wall toward the center of the channel; (ii) transition of the N-terminal region from an α-helical structure that aligns with the barrel wall to a less-structured, unfolded helix element that interacts with the opposing barrel wall, and (iii) movement of the N-terminal region into and out of the channel lumen. Calculations using both Poisson–Boltzmann and Poisson–Nernst–Planck electrostatic equations agree with the N-terminal region being involved in gating but not via lateral or horizontal movement of the helix. Thus, the accumulated results and the derived models point to the N-terminal domain as being involved in the channel gating, although the precise mechanism has yet to be described.

VDAC1 C-terminal domain

In contrast to the extensive studies directed at defining N-terminal domain structure–function, very little research effort has addressed the VDAC1 C-terminal domain. Recently, a frame-shift resulting in appearance of an early stop codon in the VDAC1 gene, leading to the absence of approximately 60% of the C-terminal portion of VDAC1, was noted in gastric and colonic cancers with microsatellite instability. Patients with this somatic mutation are heterozygous.

A link between the VDAC1 C-terminal region and cancer also comes from studies connecting hypoxia and C-terminal cleavage. Hypoxic conditions were found to trigger cleavage of the VDAC1 C-terminal to yield a 26-kDa protein. This C-terminal-cleaved VDAC1 was regulated by HIF-1α and was correlated with hypoxic cell survival and chemotherapy resistance. Based on the incidence of δC-VDAC1 in lung cancer (about 50% on average and higher in late stage tumors), this form of the protein was proposed to serve as a biomarker to stratify tumor progression in lung cancer patients. Finally, it was reported that an unidentified mitochondrial calpain cleaves the apoptotic induction factor (AIF) and VDAC1 in a Ca2+-dependent manner, and that such cleavage triggers tVDAC–Bax pores that are associated with the release of tAIF.

VDAC1 OLIGOMERIZATION AND FUNCTION

Purified and membrane-embedded mammalian VDAC1 were shown to assemble into dimers, trimers, tetramers, and higher oligomers, as revealed by chemical cross-linking and fluorescence resonance energy transfer (FRET) analysis. A low-resolution (15 Å) surface structure of VDAC1, obtained by metal shadowing and cryo-electron microscopy of human VDAC1 crystals grown in the presence of phospholipids, showed a dimeric organization of VDAC1. High-resolution AFM of purified native OMM from potato tubers or yeast showed the distribution of VDAC in an equilibrium ranging from single membrane-embedded pores to hexamers and higher-order oligomers, including arrays of up to 20 molecules. In addition, the use of symmetry operators on the NMR-based structure of recombinant hVDAC1 implied that it forms a dimer of monomers arranged in parallel, while analysis of the crystal packing of mVDAC1 revealed strong anti-parallel dimers that further assemble into hexamers.

Interestingly, VDAC1 oligomerization is highly increased upon apoptosis induction. Structural and computational-based approaches, in combination with site-directed mutagenesis, cysteine replacement, and chemical cross-linking, identified the contact sites between VDAC1 molecules in dimers and higher oligomers. Two forms of dimeric VDAC1, one with a contact site involving β-strands 1, 2, and 19 and the second involving β-strands 16 and 17, were identified. Moreover, the results suggest that VDAC1 exists as a dimer that undergoes conformational changes upon apoptosis induction to assemble into higher oligomeric states with contact sites also involving β-strand 8.

The function of VDAC1 oligomers is not known. It was proposed that an organization of VDAC1 beyond the monomeric or dimeric forms may contribute to stabilizing the protein. On the other hand, it was proposed that the oligomeric assembly of VDAC1 offers a platform for other proteins to oligomerize, such as HK. HK-I assumes a tetrameric structure that is greatly enhanced when the enzyme is bound to mitochondria or when it interacts with the mitochondria to inhibit permeability transition pore (PTP) opening. Creatine kinase, when bound to VDAC1 at the inter-membrane space, forms high order oligomers, interacting with VDAC1 exclusively in the octameric state, with the dimeric state only showing weak affinity for VDAC1.

Recently, the function of VDAC1 oligomerization in apoptosis, namely mediating the pathway for the release of Cyto c, was proposed. VDAC1 oligomerization was strongly correlate with apoptosis induction, while apoptosis induction by various inducers was accompanied by an up to 20-fold increase in VDAC1 oligomerization, indicating a shift in VDAC1 organization toward the oligomeric form under such conditions (;; see VDAC1 Oligomerization and Release of Cytochrome c).

VDAC1 AND MITOCHONDRIA-MEDIATED APOPTOSIS

In apoptosis, a multi-step process that can be initiated by a variety of stimuli, a cascade of cysteine proteases, caspases, are activated, subsequently leading to organized cell demise. Defects in the regulation of apoptosis are often associated with various diseases, with the ability of cells to evade apoptosis being a hallmark of cancer. Alterations of apoptosis are involved in tumorigenesis, as well as in cellular responses to anti-tumor treatments.

THE EXTRINSIC AND INTRINSIC APOPTOTIC PATHWAYS

Apoptosis can be activated via the extrinsic or intrinsic pathways. In the extrinsic pathway, apoptosis is induced by extrinsic apoptotic signals initiated by ligand engagement of cell surface receptors, such as Fas and TNF receptors. The intrinsic pathway is initiated in mitochondria in response to different stimuli. Receptor binding by an extrinsic signal typically leads to the recruitment of adapter proteins that promote caspase oligomerization and auto-processing. The extrinsic apoptotic pathway can induce activation of the intrinsic pathway via caspase 8-dependent cleavage of Bid and translocation of the truncated form (tBid) to the mitochondria. Thus, apoptotic signals initiated by death receptors can be linked to mitochondria-mediated apoptosis.

The intrinsic apoptotic pathway involves mitochondria. Mitochondria contain an arsenal of apoptogenic factors, normally residing in the inter-membranal space (IMS), such as Cyto c, AIF, Smac/DIABLO, and endonuclease G. During transduction of an apoptotic signal into the cell, an alteration in mitochondrial permeability occurs, causing the release of these apoptogenic factors from the IMS. These proteins participate in complex processes resulting in the activation of proteases and nucleases, leading to protein and DNA degradation, and ultimately, cell death. Most notable among the released protein is Cyto c that initiates apoptosis by binding to a central apoptotic regulator, Apaf-1, promoting oligomerization of Apaf-1 and activation of caspase 9, which subsequently activates effector caspases, such as caspases 3, 6, and 7, encouraging execution of cell death. How Cyto c and other apoptogenic factors are released from mitochondria is not clear, and will be discussed below.

Mitochondria-mediated apoptosis can be induced in response to different stimuli, including high levels of cytoplasmic Ca2+, reactive oxygen species (ROS), activation of pro-apoptotic Bcl-2 family proteins or UV damage. Chemotherapeutic agents act via different mechanisms to induce mitochondria-dependent apoptosis. These include betulinic acid, PK11195, diamide, lonidamine (LND; ), arsenite, 6[3-adamantyl-4-hydroxyphenyl]-2-naphthalene carboxylic acid (CD437; ), 2-chloro-2′-deoxyadenosine, 2-chloro-2′-ara-fluorodeoxy-adenosine, MT-21, verteporfin, resveratrol, and paclitaxel.

As mitochondria represent an appropriate target for therapeutic agents designed to modulate apoptosis, continued research into the mechanisms of mitochondria-mediated apoptotic cell death, coupled with further characterization of the released molecules, will offer new and promising targets for chemotherapeutic intervention in a host of pathologies.

VDAC1 AND APOPTOSIS

The involvement of VDAC1 in mitochondria-mediated apoptosis has been proposed based on several lines of experimental evidence: (a) Anti-VDAC1 antibodies specifically and effectively prevent As2O3-induced Cyto c release from isolated mitochondria and when microinjected into cells, prevented Bax-induced Cyto c release and subsequent apoptosis, as well as etoposide-, paclitaxel-, and staurosporine (STS)-induced apoptosis. Anti-VDAC1 antibodies also inhibited the interaction of Bax with VDAC and the triggering of cell death. Microinjection of anti-VDAC antibodies into primary rat hepatocytes effectively prevents apoptosis and Bax–VDAC interactions, as induced by ethanol; (b) VDAC1 is the proposed target of pro- and anti-apoptotic members of the Bcl2 family and of HK-I and HK-II (;;;;; see VDAC1 Transport of Ca2+ and Function in ER-mitochondria Cross-talk); (c) inhibition of Cyto c release and cell death mediated by HK occurred in cells expressing native but not mutated VDAC1; (d) RuR, interacting with Ca2+-binding proteins, interacts with native but not mutated VDAC1 to prevent Cyto c release and cell death; (e) siRNA-mediated down-expression of VDAC1 prevented cell death and activation of Bax induced by cisplatin and strongly reduced cisplatin-induced release of Cyto c and AIF, as well as the maturation of caspases-3. Similarly, reducing VDAC1 expression by siRNA attenuated endostatin-induced apoptosis; (f) over-expression of human, murine, yeast, and rice VDAC induce apoptotic cell death; (g) knockdown of VDAC1 in non-small cell lung cancer (NSCLC) cells inhibited TRAIL-induced activation of caspase-8 and subsequent apoptosis; and (h) release of Cyto c was obtained using purified VDAC1 reconstituted into liposomes in which Cyto c had been encapsulated. Finally, (i) growth factor removal from the medium resulted in reduced nucleotide exchange between mitochondria and cytosol, leading to Cyto c release and apoptosis.

In general, there are two views as to the relationship between the conducting state of the VDAC1 channel and cell death. While one view suggests that closure, rather than opening of VDAC leads to OMM permeabilization and apoptosis, the second model suggest a distinct VDAC1-based conducting pathways, namely a pore formed in the center of a VDAC1 oligomer (;;; see VDAC1 Oligomerization and Function).

PROPOSED MECHANISMS OF CYTOCHROME c RELEASE FROM THE MITOCHONDRIA

Several proposals regarding the mechanism of Cyto c crossing the OMM have been proposed (Figure 4). However, none of the current models of mitochondrial membrane permeabilization can account for all of the experimental data.

In healthy cells, Cyto c is located in the mitochondrial IMS, where it serves as an electron shuttle between complexes III and IV of the respiratory chain, with most Cyto c being bound to cardiolipin (CL). Signals inducing mitochondria-mediated apoptosis result in the release of IMS proteins, including Cyto c (see The Extrinsic and Intrinsic Apoptotic Pathways). The mechanisms by which Cyto c and other pro-apoptotic effector molecules are released have challenged many researchers and several competing models have been proposed to explain the workings of this event (Figure 4; ). While some models suggest that the proteins crossing the OMM exclusively involve an increase in OMM permeability due to the formation of a channel large enough to allow for the release of proteins, such as Cyto c, others consider efflux of the proteins to be due to disruption of OMM integrity. The following briefly describes the various proposed models:

The permeability transition pore and the release of pro-apoptotic proteins

One model (Model A, Figure 4) for mitochondrial membrane permeability (MMP) suggests the formation of a PTP, a large high-conductance multi-protein complex comprising several components and spanning both mitochondrial membranes. PTP opening is followed by Ca2+ accumulation in the matrix, leading to a sudden increase in permeability to solutes (up to 1,500 Da;;;;; ). This Ca2+-dependent increase in MMP leads to loss of membrane potential, mitochondrial swelling, and rupture of the OMM. According to this model, other factors, such as changes in the energetic balance of the mitochondria, anoxia, and ROS can also induce MMP due to PTP opening (reviewed in ).

The proposed PTP complex components include VDAC1 at the OMM, ANT in the inner mitochondrial membrane (IMM), and cyclophilin D (CypD) in the matrix. Recent studies on the PTP, however, have raised doubts about the proposed members of the complex and the importance of PTP in triggering apoptosis. Mitochondria isolated from animal models by knockout of genes encoding one or more ANT or VDAC isoforms exhibit Ca2+- and oxidative stress-induced PTP opening, suggesting that the proposed components of the standard model of the PTP complex needs to be reconsidered and further characterized. On the other hand, CypD was found to be essential for MMP mediated by Ca2+ overload and that the CypD-dependent MMP regulates some forms of necrotic cell death but not apoptotic death.

Although the mechanism(s) responsible for PTP opening and its physiological function have not yet been resolved, a variety of agents were found to promote or inhibit PTP opening, including Ca2+, inorganic phosphate, various oxidizing agents, glutamate, nucleotides, CypD ligands, gelsolin, HK, and proteins of the Bcl-2 family. Some of these compounds have also been shown to interact with VDAC1 directly and modify its channel activity. Similarly, the ANT ligands, atractyloside and bongkrekic acid, modulate PTP opening. The function of PTP in apoptosis and necrosis and as a potential therapeutic target for cancer, ischemia-reperfusion injury, and neurodegeneration were proposed.

Osmotic matrix swelling and OMM rupture leading to non-specific release of inter-membrane proteins into the cytosol

This model proposes that a sudden increase in IMM permeability to solutes of low molecular weight leads to mitochondria swelling and rupture of the OMM, allowing the efflux of IMS proteins, such as Cyto c, to the cytosol. It has been suggested that matrix swelling and OMM rupture result from a defect in mitochondrial ATP/ADP exchange due to VDAC1 closure, as a result, for example, of removal of a normal growth factor or exposure to G3139 (Model B, Figure 4;,; ). Several studies, however, demonstrated that Cyto c release preceded membrane potential (Δψm) loss in cerebellar granule neurons undergoing apoptotic death and was not accompanied by mitochondrial swelling or OMM rupture.

Bax oligomers constitute the OMM cytochrome c-conducting channel

A third proposed mechanism for Cyto c release suggests that oligomeric Bax forms the Cyto c-conducting channel in the OMM (Model C, Figure 4;,;;;; ). Upon apoptosis induction with STS or UV irradiation, Bax became associated with mitochondria as a large oligomer/complex of 96–260 kDa. While tBid enhances oligomerization of Bax, Bcl-2 prevented Bax oligomerization and insertion into the mitochondrial membrane. Several studies, however, showed that apoptosis can be induced in the absence of Bax, suggesting that the protein is not obligatory for apoptosis induction and that other mechanisms exist.

Bax and bak oligomers form pores for pro-apoptotic factor efflux during apoptosis

The appearance of a channel formed by Bax and Bak hetero-oligomers upon apoptotic insult enabling efflux of pro-apoptotic effectors has been suggested (Model D, Figure 4;;;,; ). tBid was proposed to activate the generation of Bax and Bak complexes up to 500 kDa. At the same time, anti-apoptotic proteins, such as Bcl-2 and Bcl-xL, were shown to protect cells from apoptosis via a blockage of the Bax–Bak interaction, subsequently preventing Cyto c release.

Mitochondrial apoptosis-induced channel as a pathway for cytochrome c release

Mitochondrial apoptosis-induced channel (MAC), a supra-molecular high-conductance channel in the OMM, is thought to assemble during early apoptosis and serve as the Cyto c release channel that is regulated by Bcl-2 family members (;,;,,; Model E, Figure 4). The complete molecular identity of MAC is unknown. Recently, it was proposed that Bax is an essential constituent of MAC in some systems, as the electrophysiological characteristics of MAC are very similar to those of Bax channels, while depletion of Bax significantly diminishes MAC activity.

Hetero-oligomers composed of VDAC1 and bax form the apoptotic protein release channel

The formation of hetero-oligomers composed of VDAC1 and Bax were also proposed as a mechanism for Cyto c efflux (Model F, Figure 4;;; ). It was found that recombinant Bax induced permeability in liposomes containing VDAC, implying that VDAC can induce membrane permeability in the presence of Bax. In addition, intracellular microinjection of anti-VDAC antibodies prevented Bax-induced Cyto c release. Electrophysiological studies of Bax and VDAC in PLB revealed that when combined, single-channel conductance rises by factors of 4 and 10 over values attained with VDAC and Bax channels alone, respectively. Moreover, HK-I and HK-II compete with Bax for interaction with VDAC1. It was also demonstrated that siRNA-mediated down-expression of VDAC1 strongly suppressed cisplatin-induced activation of Bax. Finally, another version of this model suggests that oligomeric VDAC is the prime Cyto c release channel and that its pore is regulated by Bax.

Ceramides and the release of cytochrome c

A self-assembled ceramide-based lipid channel that forms in the OMM was suggested as being the Cyto c release pathway (Model G, Figure 4;; ). Ceramides were postulated to form a pore in the OMM with a diameter large enough to accommodate Cyto c. An alternative mechanism proposes that ceramides promote the dissociation of Cyto c by altering IMM lipid microdomains. Another proposal suggest that ceramides and cholesterol both affect membrane microenvironments so as to favor Bax activation, with translocation to mitochondria fostering propagation of the apoptotic cascade.

VDAC1 oligomerization and release of cytochrome c

In a model describing Cyto c release developed in our group, it is proposed that mitochondrial pore formation during apoptosis involves the assembly of homo-oligomers of VDAC1 (Model H, Figure 4;;,; ). This model is based on a VDAC1 diameter pore (2.5–3.0 nm; ) being large enough for the movement of nucleotides and small molecules but too small to allow passage of a folded protein, like Cyto c. Thus, a model in which Cyto c release takes place through the formation of large protein-conducting channel within a VDAC1 homo-oligomer or in a hetero-oligomer containing VDAC1 and pro-apoptotic proteins formed by oligomerization of VDAC1 is offered. Substantial evidence for the formation of higher ordered VDAC1-containing complexes exists (see VDAC1 Oligomerization and Function).

Recently, it has been demonstrated that VDAC1 undergoes oligomerization in response to apoptotic stimuli, with VDAC1 oligomerization being enhanced up to 20-fold, as revealed by chemical cross-linking, or directly monitored in living cells using bioluminescence resonance energy transfer (BRET;; ). Enhancement of VDAC oligomerization was obtained regardless of the cell type or apoptosis inducer used, including STS, curcumin, As2O3, etoposide, cisplatin, selenite, TNF-α, H2O2, or UV, all affecting mitochondria yet acting through different mechanisms (; Figure 5). Conversely, the apoptosis inhibitor, DIDS, prevented STS-induced VDAC1 oligomerization and apoptosis. Moreover, VDAC1 over-expression resulted in VDAC1 oligomerization and apoptosis in the absence of any apoptosis stimuli. Furthermore, it was demonstrated that in cells expressing a VDAC1 dimeric fusion protein comprising wild type and the RuR-insensitive E72Q-mutated VDAC1 showed no protection against STS-induced apoptosis. This dominant-negative VDAC1 mutant reveals oligomeric VDAC1 to be the active unit in mitochondria-mediated apoptosis.

The molecular mechanisms triggering VDAC1 oligomerization upon apoptosis induction remain unknown. Post-translational modification of VDAC1, such as phosphorylation or oxidation, may modulate its oligomeric state. The involvement of lipids has been suggested recently. The anionic lipid, phosphatidylglycerol (PG), was found to significantly enhance VDAC1 oligomerization in the membrane, whereas CL disrupts VDAC1 supra-molecular assemblies. Interestingly, during apoptosis, the level of PG in mitochondria increases, whereas that of CL decreases. Another proposed mechanism involves Cyto c detachment from its binding site, namely CL at the IMM. Apoptotic signals leading to the oxidation of CL and dissociation of Cyto c from the lipid, together with our finding that VDAC1 oligomerization is highly encouraged by Cyto c, support a scenario whereby unbound Cyto c promotes VDAC oligomerization, Cyto c release and subsequent apoptosis.

Clearly, a more complete understanding of the mechanisms underlying VDAC1 oligomer assembly and its role in Cyto c release will require additional study. Indeed, the multiple pathways and mechanisms of Cyto c release presented here may co-exist within a single model of cell death, depending on the cell type and the nature of the stimulus.

CANCER METABOLISM, HEXOKINASE, AND VDAC

In recent years, a substantial body of evidence has accumulated indicating a correlation between alterations in cell metabolism and cancer formation. Cancer cells undergo significant metabolic adaptation to fuel cell growth and division. Malignant cancer cells typically display high rates of glycolysis even when fully oxygenated and are subject to suppressed mitochondrial respiration, despite the fact that glycolysis is a less energy-efficient pathway, a phenomenon known as the “Warburg effect”. The Warburg effect likely provides the vast majority of cancerous tumors with a number of benefits in the form of precursors for the biosynthesis of nucleic acids, phospholipids, fatty acids, cholesterol, and porphyrins. A second advantage of the Warburg effect is its likely involvement in both tumor protection and invasion. Tumor cells produce lactic acid via glycolysis and transport it out of the cell, leading to increased acidity of the closed microenvironment, generating a low pH “coat.” This is proposed to protect tumors against attack by the immune system while inducing negative effects on normal surrounding cells, aiding in preparing the surrounding tissues for invasion. Additionally, the Warburg effect also assures longer tumor survival time if oxygen becomes limiting. Moreover, cancer-associated abnormalities in glucose metabolism enhance cellular resistance to apoptosis, with mitochondria playing a key role in this process. Finally, mitochondria have been found to playa role in cellular re-programming from the catabolic to the anabolic modes, with such metabolic flexibility and cellular hierarchy being crucial in metastatic cancer.

Such metabolic re-programming of cancer cells includes marked over-expression of mitochondrial-bound HK isoforms, considered as the rate-limiting enzyme of glycolysis and serving as the biochemical gate of this pathway. HK interacts with VDAC1 at the OMM and forms the main interface between mitochondria and the cytosol. VDAC1 contributes to cancer metabolism via transport of various metabolites, mediating ATP/ADP exchange across the OMM and is, therefore, defined as the “food channel.” HK, by association with VDAC1, gains direct access to mitochondrial ATP, reaching VDAC1 via the ANT in the IMM, allowing it to phosphorylate and “trap” any incoming glucose. With this direct coupling of mitochondrially generated ATP to incoming glucose via VDAC1-bound HK, mitochondria regulate glycolytic flux with that of the tricarboxylic acid (TCA) cycle and ATP synthase to balance the energy requirements of the tumor cell with biochemical requirements for metabolites (i.e., the anaplerotic and cataplerotic pathways, respectively) or metabolite precursors that are required by the tumor. Thus, both the glycolytic pathway and other seminal metabolic pathways, like the pentose phosphate shunt, are regulated via the energy-coupling resulting from the formation of the VDAC1-bound HK complex. As part of a system that impacts cell growth, the VDAC1–HK complex represents a remarkable target for cancer therapy (see The Interaction of VDAC1 with Hexokinase Regulates Cell Bioenergetics and Apoptosis).

VDAC1 ASSOCIATION WITH PROTEINS AND CANCER

The localization of VDAC1 at the OMM provides structural and functional anchoring sites for a diverse set of cytosolic proteins that together with VDAC1 mediate metabolic and signaling cross-talk between cytosol and mitochondria (Table 1). VDAC1 displays binding sites for glycerol kinase, HK, creatine kinase, C-Raf kinase, ANT, the peripheral benzodiazepine receptor [also known as translocator protein (TSPO); ], tubulin, the dynein light chain, mtHSP70, the ORDIC channel, GAPDH, actin, and gelsolin, as well as Bcl-2 family members. Interaction with apoptosis-regulating proteins, such as HK and Bcl-2 family members, make VDAC1 a key protein in apoptosis regulation. Here, we focus on those VDAC1-interacting proteins showing modified levels of expression in cancer cells.

HK expression and bioenergetics regulation in cancer cells

One of the signature phenotypes of highly malignant, poorly differentiated tumors is their high rate of glycolysis, leading to enhanced lactate generation. This property is frequently dependent on the marked over-expression of VDAC1-bound HK (;;;; see Cancer Metabolism, Hexokinase and VDAC). HK thus lies at the apex of the glycolytic pathway that provides the metabolic intermediates required by the biosynthetic pathways on which a transformed cell places such heavy demand.

Hexokinase catalyzes the rate-limiting step in glycolysis, the ATP-dependent phosphorylation of glucose to G-6-P. The mitochondria bound-isoforms, HK-I and HK-II, were found to be over-expressed in many cancers, including colon, prostate, lymphoma, glioma, gastric adenomas, carcinomas, and breast cancers. The elevated levels of mitochondria-bound HK in cancer cells is thus suggested to play a pivotal role in promoting cell growth and survival in rapidly growing, highly glycolytic tumors and in protecting against mitochondria-mediated cell death. The association/dissociation of HK with/from VDAC1 and the switching of VDAC1 between an “open” and a “closed” state regulate cross-talk between mitochondria and the cytosol. This control is important in maintaining the mitochondria respiration and glycolysis equilibrium at the heart of the energetic and metabolic homeostasis of the cancer cell. Cancer cell, however, possess an escape mechanism that intervenes when G-6-P accumulates and dissociates HK from VDAC.

VDAC1 is the mitochondrial binding site of HK

The interaction of HK with the mitochondria, and specifically with VDAC1, has shifted our view of HK as predominantly fulfilling a metabolic role to one of regulation of apoptotic responsiveness of the cell, making the VDAC1–HK complex a target for therapeutic purposes.

The interaction between HK-I and VDAC1 was first demonstrated in a reconstituted system where HK-I decreased the channel conductance of VDAC1, an effect that was reversed by G-6-P, shown to detach HK from isolated mitochondria. The interaction between HK-I and VDAC1 was again demonstrated by co-immunoprecipitation. The co-localization of HK-I with each of the three isoforms of VDAC1 was demonstrated using two-color stimulated emission depletion (STED) microscopy. The HK-I–VDAC1 interaction can be abrogated upon mutagenesis of a single VDAC1 residue (Glu73, Glu202, or Glu65), resulting in an elimination of HK-mediated protection against apoptosis and channel closure. N-terminally truncated VDAC1 is incapable of binding HK or Bcl-xL. Moreover, when the N-terminal region α-helix structure in VDAC1 was perturbed, the binding of HK was reduced. It was proposed that the N-terminal region of HK-I is inserted into the channel pore, where it interacts with the N-terminal region of VDAC1. It should be noted that there is strong residue conservation between the HK-I and HK-II N-termini, and that such conservation is not shared by the other two non-bound mitochondrial isoforms, HK-III and HK-IV.

The VDAC1–HK interaction was shown to be negatively regulated by phosphorylation, when GSK3β is up-regulated. Finally, VDAC1-based peptides were found to interact with purified HK and when expressed in cells over-expressing HK, prevented the anti-apoptotic activity of HK.

HK-linked protection against cell death is mediated via interaction with VDAC1

In vitro and in vivo studies have shown that elevated levels of mitochondria-bound HK in cancer cells also protect against mitochondria-mediated apoptosis via direct interaction with VDAC1.

Mitochondrially associated HK has been shown to protect HeLa and HEK cells from entering apoptosis. This protection was related to a blockade of the interaction of the pro-apoptotic protein, Bax, with VDAC1. Moreover, over-expression of HK-I or HK-II in tumor-derived cell lines suppressed STS-induced Cyto c release and apoptosis. A decrease in apoptosis and an increase in cell proliferation have also been reported to be induced by HK-II expression in the NIH-3T3 and rat 1a cell lines. Importantly, mutagenesis studies revealed that single mutations or N-terminal truncation in VDAC1 prevented HK-I-mediated protection against apoptosis and channel closure in a reconstituted membrane system. In addition, binding of HK-II to mitochondria inhibits Bax-induced Cyto c release and apoptosis. HK binding to VDAC1 is regulated by protein kinases, notably GSK-3β and protein kinase C (PKC; ), as well as by the cholesterol content of the OMM.

HK interaction with VDAC1, advantages to cancer cells

Several mechanisms by which HK binding to VDAC1 protects against apoptosis and promotes cell survival can be considered. These include controlling energy and metabolic homeostasis, as well as preventing VDAC1-mediated Cyto c release and shielding VDAC1 from pro-apoptotic factor binding, thus offering the tumor cell protection from cell death in a synergic manner. The advantages to cancer cells of HK binding to VDAC1 include:

Energy and metabolite production and access. Hexokinase bound to VDAC1 provides cells with metabolic advantages, allowing enhanced cell growth. Anchoring of HK to VDAC1 offers the enzyme direct access to mitochondrial sources of ATP and greater affinity for Mg2+-ATP. HK bound to the cytosolic face of VDAC1 acts as a gate, regulating the traffic of various metabolites through the VDAC1. In addition, VDAC1-bound HK is less sensitive to inhibition by its product, G-6-P, thus avoiding product inhibition. The HK–VDAC1 interaction increases energy and metabolite production of the high energy-demanding cancer cells, allowing for maintenance of a high glycolytic flux rate in tumors.

VDAC1-bound HK acts as an anti-apoptotic protein. Accumulated evidence demonstrated that HK-I and HK-II also function as anti-apoptotic proteins when bound to VDAC1, while their detachment enabled activation of apoptosis. Disruption of HK binding to VDAC1 by mutation in VDAC1 or by addition of VDAC1-based peptides decreased the survival of cancer cells.

Hexokinase interaction with VDAC1 protects against activation of apoptosis by Bax or Bak. The detachment of HK-II from the mitochondria was found to markedly potentiate the onset of caspase-2-induced mitochondrial damage.

Regulation of ROS production by HK. Reactive oxygen species act as second messengers in cell signaling and are essential for multiple biological processes in normal cells. However, ROS can also provoke damage to multiple cellular organelles and processes. ROS production is usually increased in cancer cells due to oncogene activation (; see VDAC1 Function in ROS Release, ROS-mediated Apoptosis and Interaction with NO). Mitochondria-associated HK was shown to reduce mitochondrial ROS generation, with HK-I and HK-II reducing intracellular levels of ROS. Moreover, expression of both HK-I and HK-II was found to protect against oxidant-induced cell death. Thus, detachment of HK from VDAC1 could lead to increased ROS generation and release to the cytoplasm, thereby activating cell death.

Stabilization of both HK and VDAC1. VDAC1, containing an odd number of β-strands, presents conformational intrinsic instability within the first four β-strands (β1–4), relative to other VDAC1 regions.

In silico studies of the VDAC1–HK-I interaction predicates that both proteins attain a more stable state through protein–protein interaction. It is proposed that upon binding with the N-terminal helix of HK-I, VDAC1 acquires higher stability via the formation of a network of chemical bonds both due to direct protein–protein contacts and to hydrogen bonds mediated by an ATP molecule and an Mg2+ ion.

Increased synthesis and uptake of cholesterol. Cancer cells have been shown to exhibit a 2- to 10-fold increase in mitochondrial cholesterol content, in comparison to liver mitochondria. It has been proposed that the increased binding of HK to the mitochondria of cancer cells may play a role in mediating increased synthesis and uptake of cholesterol into the mitochondria of cancer cells.

Disruption of the HK–VDAC interaction as an approach to cancer therapy

If one considers the metabolic importance of both VDAC1 and HK, the role that HK fulfills in promoting tumor cell survival and the function of the HK–VDAC1 interaction in regulating apoptosis, as well as other functions as presented above, then disruption of the HK–VDAC1 complex represents an attractive target for cancer therapy and may form the basis for novel anti-cancer drugs. Indeed, several different compounds have been employed to disrupt the HK–VDAC1 association, resulting in apoptotic cell death. These include peptides corresponding to the amino terminus of both HK-I and HK-II, clotrimazole and a cell-permeable HK-II-based peptide. Methyl jasmonate (a plant-derived stress hormone) binds to and detaches mitochondria-bound HK from several cancer cell types. HK detachment can be visualized using HK–GFP. Cell expression of HK-I–GFP showed punctuated distribution that co-localized with MitoTracker Red (Figure 6), suggesting a mitochondrial localization. The induction of apoptosis by STS resulted in HK–I-GFP detachment, as reflected by the diffuse fluorescence seen (Figure 6).

The small molecule alkylating agent, 3-bromopyruvic acid (3BP) was found to be phosphorylated by HK and to inhibit glycolytic rate in VX2 tumors. 3BP covalently modifies protein cysteine residues, resulting in rapid activity loss. In animal models, 3BP showed high efficacy against advanced stage malignant tumors by inhibiting both glycolysis and mitochondrial energy generation, possibly by interfering with the HK–VDAC1 complex. Thus, 3BP is proposed to target metabolism and blocks energy supplies. Other studies demonstrated the potential of 3BP as a potent anti-cancer agent in humans. Current knowledge related to 3BP and its promise as a future cancer therapeutic are the focus of a special 2012 issue of the Journal of Bioenergetics and Biomembranes (JOBB 44-1, 2012).

In conclusion, since VDAC1-bound HK is essential for tumor cells, conferring several advantages (see HK-linked Protection Against Cell Death is Mediated via Interaction with VDAC1), including protection against apoptotic events and promoting aerobic glycolysis, the detachment of HK from VDAC1 offers a novel therapeutic strategy to augment apoptosis, revert the hyper-glycolytic state and enhance the therapeutic efficacy of conventional chemotherapeutic agents.

MEMBERS OF THE Bcl-2 FAMILY OF PROTEINS INTERACT WITH VDAC

The B cell lymphoma/leukemia-2 (Bcl-2) family of proteins plays an essential role in the control of apoptosis at the interface with mitochondria. The Bcl-2 family consists of more than 20 pro-apoptotic (e.g., Bid, Bax, and Bak) and anti-apoptotic (e.g., Bcl-2 and Bcl-xL) members, all characterized by the presence of Bcl2 homology (BH) domains. Accordingly, these proteins can be sub-divided into three main groups, based on the regions of the BH domain they contain and their function, namely the multi-domain anti-apoptotic (Bcl-2, Bcl-xL, Bcl-w, Mcl-1, and Bfl-1/A1), the multi-domain pro-apoptotic [Bcl-2-associated X protein (Bax) and Bak], and the BH3-only pro-apoptotic (Bid, Bim, Bad, Bik, Noxa, PUMA, Bmf, and Hrk) proteins. The anti-apoptotic members of the Bcl-2-family contribute to tumor initiation, disease progression, and drug resistance. Indeed, enhanced expression of anti-apoptotic Bcl-2 family members was shown to be associated with the resistance of many tumors to chemotherapy. For example, in multiple studies, increased levels of Bcl-2, Bcl-xL, and Mcl-1 proteins were linked to survival of multiple myeloma cells and resistance to chemotherapy, while in most cases of chronic lymphocytic leukemia (CLL), elevated Bcl-2 mRNA and protein levels are noted.

The mechanism whereby Bcl2 family members control apoptosis is still not fully understood. However, it is well established that their activities involve controlling OMM permeability. Accumulated findings linked the activity of both anti-apoptotic and pro-apoptotic proteins to their association with VDAC. VDAC1 interacts with Bax, Bim, Bcl2, and Bcl-xL in isolated mitochondria and in reconstituted membrane systems. Purified C-terminally truncated Bcl2 and Bcl-xL interact with VDAC1 and reduced the channel conductance of wild type but not of certain mutated forms of VDAC1 or N-terminally truncated VDAC. Similarly, both Bcl2 and Bcl-xL prevented apoptosis as induced by various stimuli in cells expressing wild type but not mutated VDAC1. It was proposed that VDAC1 interacts with both Bax and Bcl-xL to form a tertiary complex. A direct interaction between Bcl-xL and VDAC1 was demonstrated by NMR. Interaction of the putative loop region of VDAC1 with Bcl-xL was proposed. Bcl-xL was also shown to affect VDAC oligomerization, as revealed by chemical cross-linking of micelle-bound VDAC, shifting the equilibrium of VDAC from the trimeric to the dimeric state. Furthermore, synthetic peptides corresponding to the VDAC1 N-terminal region and other cytosol-facing VDAC1 sequences bound Bcl2 and Bcl-xL. Such peptides, in cell-penetrating form or expressed in the cell, were able to suppress the anti-apoptotic activities of Bcl2 and Bcl-xL in cells. Thus, VDAC1-based peptides, targeting the anti-apoptotic activity of Bcl-xL and Bcl2, can serve as potential cancer therapeutics.

Bax and VDAC reconstituted into liposomes were shown to form a new channel, with a conductance 4–10 times larger than that of the individual proteins, and with such increase being prevented by Bcl-xL. The interaction of Bax and Bim with VDAC leads to Cyto c release, with Bcl-xL and anti-VDAC antibodies preventing this release. It has also been shown that Bid but not Bax modulates VDAC channel conductance.

In VDAC1-depleted cells, cisplatin-induced activation of Bax was inhibited, suggesting that VDAC1 is involved in Bax-mediated apoptosis. Furthermore, Bcl-2 and Bcl-xL blocked As2O3-induced VDAC dimerization. These results indicate that Bcl-2 family proteins regulate VDAC-mediated apoptosis and hence, the release of apoptogenic proteins from mitochondria.

VDAC AND THE TRANSLOCATOR PROTEIN

Translocator protein is an 18-kDa integral membrane protein, originally identified as the peripheral benzodiazepine receptor or isoquinoline-binding protein, that is over-expressed in breast, prostate, colon, and brain cancer, with protein expression linked to cancer progression and poor survival rates. Like VDAC1, TSPO is located in the OMM and was proposed to activate PTP opening, leading to apoptosis. Interactions between TSPO and VDAC are thought to play a role in apoptosis. High-affinity ligand occupancy of TSPO was shown to attenuate anti-neoplastic agent-induced apoptosis. The observations that TSPO is involved in the generation of ROS and that TSPO association with VDAC may enhance ROS production prior to apoptotic induction, indirectly links both proteins. Still, there is no direct evidence for a TSPO–VDAC1 interaction at the molecular level.

INTERACTION OF VDAC1 WITH AND REGULATION BY CYTOSKELETAL PROTEINS

In cancer, morphogenic changes are required for high proliferative rates, the acquisition of inappropriate migratory patterns, and invasive characteristics. Alterations in the dynamics of the actin and tubulin components of the cytoskeleton are well-known consequences of signaling and the triggering of responses like apoptosis. Mitochondria are dynamic organelles that actively travel along the cytoskeleton within the cell. Within this framework, specific association of VDAC1 with tubulin was shown by co-immunoprecipitation and by tubulin-induced VDAC1 closure. A model was proposed whereby the negatively charged C-terminus of tubulin penetrates into the positively charged VDAC1 pore, leading to decreased channel conductance. It was proposed that tubulin, VDAC1 and mitochondrial creatine kinase (MtCK) are members of a super complex that is structurally and functionally coupled to the ATP synthasome. Recent evidence indicates that the lipid composition of the membrane is capable of controlling tubulin–VDAC interactions, thus tuning VDAC sensitivity to blockage by tubulin. Similarly, it has been reported that tubulin–VDAC interactions can be regulated by varying the membrane surface charge. In a cellular model of cardiomyocyte physiology, the super complex presents a different composition, namely one in which tubulin is replaced by HK and MtCK is absent, infusing mitochondrially generated ATP into the glycolytic pathway and thereby contributing to the Warburg effect. Other proteins associated with cytoskeleton dynamics, such as gelsolin, adseverin or scinderin (SCIN; ), have been reported to associate with VDAC, with concomitant anti-apoptotic effects.

All of these VDAC1–protein interactions establish a new interplay between kinase signaling pathways, mitochondrial respiration, and the highly dynamic microtubule network characteristic of cancerogenesis and cell proliferation. VDAC1, as the common denominator in all the interactions described above, thus presents a single unique target for efforts addressing cell physiological, metabolic, and morphological aspects of cancer.

INTERACTION OF VDAC1 WITH VIRAL PROTEINS

Many viruses encode for proteins acting on mitochondria, in general, on VDAC1, in particular, or directly targeting proteins in the apoptotic pathway. Other viruses influence apoptosis by mimicking Bcl-2 family proteins, changing their expression levels or directly interacting with Bcl-2 family proteins. HIV-1 offers an excellent example of neuronal and immunological-destructive apoptosis involving mitochondria. HIV-1 envelope proteins can trigger mitochondrial apoptosis, increasing cytosolic Ca2+, ROS, and transcriptional activation of p53, thus increasing the expression of pro-apoptotic proteins, such as Bax. The PB1-F2 protein of the influenza A virus, when localized in mitochondria, induces alteration of mitochondrial morphology, dissipation of the mitochondrial membrane potential, and cell death and has been reported to interact directly with VDAC. Hepatitis B virus (HBV) is another mitochondria-interacting virus. The HBx protein is highly homologous to VDAC1 and is proposed to “poison” the homo-oligomeric state of VDAC1, creating hetero-oligomeric structures that induce permeability of the mitochondria, allowing Cyto c release. This action of HBx can result in the development of hepatocellular carcinomas. In infected liver cell lines, hepatic virus (HEV) not only induced up-regulation of VDAC expression in infected human hepatoma cell lines but also encouraged higher levels of VDAC oligomerization, leading to apoptosis.

VDAC1 EXPRESSION LEVELS IN HEALTHY AND CANCER CELLS

In higher eukaryotes, VDAC1 is the most predominant isoform expressed. Several studies have shown that alterations in VDAC1 expression affect both the ability of cells to generate energy and their sensitivity to apoptosis-inducing reagents.

VDAC EXPRESSION LEVELS IN CANCERS AND ENHANCEMENT BY PRO-APOPTOTIC DRUGS

Several studies have demonstrated remarkable differences in the expression levels of VDACs between tumor cells and normal tissues. VDAC1 expression in several cancer cell lines was higher than in the control fibroblast cell line. NSCLC cells specifically exhibited high expression levels of VDAC1. This was shown to directly correlate with poor outcome in early stage NSCLC, thus establishing an association with aggressive tumor behavior. In addition, in several melanoma and prostate cancer cell lines, a correlation between levels of VDAC1 expression and induction of Cyto c release by G3139 was demonstrated. In a proteomic analysis of aging-related proteins in human normal colon epithelial tissues, significant up-regulation of 19 proteins was noted, including VDAC1 and VDAC2.

Several cancer treatments were found to enhance expression of VDAC. Up-regulation of VDAC1 expression was observed in three different acute lymphoblastic leukemia (ALL) cell lines (697, Sup-B15, and RS4;11) following prednisolone treatment, an observation that can be explored for predicting eventual outcome in childhood ALL. VDAC1 over-expression was observed in a cisplatin-sensitive cervix squamous cell carcinoma cell line (A431) when exposed to cisplatin, while in a cisplatin-resistant cell line (A431/Pt), the treatment resulted in down-regulation of VDAC1. Up-regulation of VDAC has been reported upon UV irradiation of apoptosis-sensitive cells. When A375 human malignant melanoma cells were treated with the tyrosinase inhibitor, arbutin, a potential anti-tumor agent, VDAC1 expression level was found to be up-regulated. In addition, ROS was found to induce up-regulation of VDAC that could be prevented by the ROS chelator, epigallocatechin.

The relationship between VDAC1 expression levels and sensitivity to various treatments was presented in several studies. The PC3 and DU145 prostate cancer cell lines are relatively resistance to apoptosis as induced by G3139 and were found to express less VDAC than did G3139-sensitive LNCaP cells. Similarly, reducing VDAC1 expression by siRNA efficiently prevented cisplatin-induced apoptosis and Bax activation in NSCLC, attenuated endostatin-induced apoptosis and inhibited selenite-induced PTP opening. The anti-cancer activity of furanonaphthoquinones (FNQs) was increased upon VDAC1 over-expression and decreased upon silencing of VDAC1 expression by siRNA.

Finally, it has also been shown that the CD45 expression is accompanied by elevated VDAC1 expression in myeloma cells sensitized to a diverse set of apoptotic stimuli via the mitochondrial pathways.

SILENCING OF VDAC1 EXPRESSION

Among the complex array of genetic changes accompanying cancer development, all cancerous cells develop altered metabolism, with VDAC1 and HK playing important functions in this metabolic reprograming (see The Interaction of VDAC1 with Hexokinase Regulates Cell Bioenergetics and Apoptosis). VDAC1 contributes to cancer metabolism via transport of various metabolites, mediating ATP/ADP exchange across the OMM and by the binding and channeling of mitochondrial ATP directly to HK (see Cancer Metabolism, Hexokinase and VDAC). The importance of VDAC1 for cancer cells is further reflected in the findings that silencing VDAC1 expression reduced cellular ATP levels and cell growth. Furthermore, when HeLa cervical cancer cells stably expressing shRNA directed against hVDAC1 were injected into nude mice, the development of a solid tumor was inhibited. It has also been shown that VDAC1 silencing potentiates H2O2-induced apoptosis and impairs mitochondrial Ca2+ loading, while silencing VDAC2 had the opposite effects. Together, these findings indicate that over-expression of VDAC1 in cancer cells could contribute to the high glycolytic phenotype seen.

ENHANCEMENT OF VDAC1 EXPRESSION, OLIGOMERIZATION AND APOPTOSIS INDUCTION

As presented above (see VDAC Expression Levels in Cancers and Enhancement by Pro-apoptotic Drugs), the expression level of VDAC1 serves as a crucial factor in the process of mitochondria-mediated apoptosis as induced by various means. Indeed, over-expression of VDAC from different sources, such as yeast, rice, fish, mice, and humans, was found to induce apoptosis. Over-expression of murine (m) VDAC1 or rat (r) VDAC1 in U-937 cells resulted in apoptotic cell death. Moreover, over-expression of rice VDAC induced apoptosis that was blocked by Bcl-2 and the VDAC channel inhibitor, DIDS. Similar results were obtained following transfection of fish cells to express Paralichthys olivaceus VDAC. Over-expression of VDAC1 causes depolarization of the IMM and activation of the PTP.

The mechanism underlying cell death induced by VDAC1 over-expression is not fully understood. However, recent studies demonstrated that VDAC1 over-expression is accompanying by its oligomerization. VDAC1 has been shown to form different oligomeric states, namely monomers, dimers, trimers, tetramers, hexamers, and higher-order oligomers (see VDAC1 Oligomerization and Function). Moreover, the supra-molecular assembly of VDAC1 in cultured cells is highly enhanced upon apoptosis induction, supporting the involvement of VDAC1 oligomerization in Cyto c release and thus, in apoptosis. Moreover, VDAC1 over-expression resulted in its oligomerization in the absence of any apoptosis stimuli. It should be noted that apoptosis induced by VDAC1 over-expression shares common features with apoptosis induced by other stimuli (e.g., STS, H2O2), as is the case for inhibition by RuR, Bcl2, HK-I over-expression, or DIDS, all agents that interact with VDAC1. Finally, HEV-infected human hepatoma cells showed enhanced VDAC expression, leading to VDAC oligomerization and apoptosis.

Thus, the over-expression of VDAC1, as induced by drugs, such as arbutin, prednisolone, or cisplatin, or by viral proteins or UV irradiation, as well as the correlation between drug effectiveness and VDAC expression, suggest that the anti-cancer activities of these drugs is associated with VDAC levels. This is further supported by the finding that cisplatin-induced apoptosis is inhibited in cells silenced for VDAC1 expression. In addition, endostatin-induced apoptosis was decreased upon silencing VDAC1 expression, and enhanced by over-expression of VDAC1. We thus propose that the high levels of VDAC1 promote its oligomerization, leading to apoptosis. Accordingly, anti-cancer strategies that specifically up-regulate VDAC1 levels in cancer cells may activate the mitochondrial apoptotic pathway, with concomitant benefit to the patient.

MITOCHONDRIA, ROS, AND OXIDATIVE STRESS

Reactive oxygen species serve important roles in diverse events, such as cellular proliferation, differentiation, and migration. It is now accepted that cellular “redox” signaling is involved in regulating normal processes and disease progression, including angio- genesis, oxidative stress, aging, and cancer. Cellular levels of ROS are linked to anti-tumor immunity, the oxidative tumor microenvironment, proliferation, and death of cancer cells.

Cancer cells exhibit high basal levels of oxidative stress due to the activation of oncogenes, loss of tumor suppressors, and the effects of the tumor microenvironment. Hypoxia, a characteristic of most solid tumor microenvironments, causes a progressive elevation in mitochondrial ROS production (chronic ROS) which over time leads to the stabilization of cells via increased HIF-2α expression, which serve as signaling molecules that activate the transcription of genes involved in cellular hypoxic adaptation. It is becoming apparent that hypoxia enables cells to survive with sustained levels of elevated ROS. However, the increased oxidant concentrations associated with cellular transformation promote tumorigenicity through signaling but can also damage DNA, proteins, and lipids. Indeed, promoting oxidative stress in cancer cells selectively kills several cancer cell lines.

Reactive oxygen species are mainly produced in the mitochondria as by-products of respiratory chain reactions, with 1–5% of the oxygen consumed by mitochondria in human cells being converted to ROS, such as superoxide anions (O2−⋅), H2O2, and hydroxyl radicals. Oxidative stress results when production of ROS exceeds the capacity of mitochondrial and cellular anti-oxidant defenses to remove these toxic species. Indeed, to combat harmful ROS, cells possess several anti-oxidant defense mechanisms, including catalytic removal of reactive species by enzymes like superoxide dismutase (SOD), catalase, and peroxidase (; Figure 6). However, about 1% of the ROS escapes elimination and cause oxidative cellular damage. The rules governing ROS transport via the OMM and control of this process, as well as the molecular mechanism of ROS activating VDAC to release Cyto c, are not clear.

VDAC1 MEDIATES ROS RELEASE FROM THE MITOCHONDRIA

Since ROS are generated in the mitochondria, they can attack the mitochondria directly and, when released to the cytosol, can attack and modify DNA, lipids, and proteins, thus affecting cell survival. This requires ROS release from the mitochondria to the cytosol, namely, crossing the OMM. VDAC1 in the OMM may serve as the major gateway for molecules exiting the IMS. Indeed, VDAC1 has been proposed to mediate ROS release from the IMS to the cytosol (Figure 6). Several pieces of evidence support the involvement of VDAC1 in ROS release from the IMS to the cytosol, including:

(i) HK-I and HK-II bound to VDAC1 decrease ROS release from mitochondria when over-expressed in HEK cells, thereby reducing intracellular levels of ROS. Also, expression of HK-I or HK-II was found to protect against oxidant-induced cell death. Thus, detachment of HK from VDAC1 could lead to increased ROS generation and release to the cytoplasm, thereby activating cell death.

(ii) Closure of VDAC appears to impede the efflux of superoxide anions from the IMS, resulting in an increased steady-state level of O2−⋅, causing internal oxidative stress and sensitizing mitochondria toward the Ca2+-induced MPT.

(iii) The VDAC inhibitors, DIDS and dextran sulfate, inhibited O2⋅ release from the mitochondria to the cytosol.

ROS-INDUCED APOPTOSIS IS MEDIATED VIA VDAC1

Mitochondria are the major source of ROS that, when released to the cytosol, can damage proteins, lipids and DNA. ROS release is mediated via VDAC1, with its interactors (e.g., HK, DIDS, RuR, AzRu) inhibiting release (Figure 7). Mitochondria also contain several enzymes that can decompose ROS. ROS can promote Cyto c release from mitochondria. In fact, it has been shown that apoptosis-inducing agents, such as inorganic arsenic compounds and doxorubicin, cause oxidative damage to DNA and protein by inducing ROS generation.

Inhibition of O2−⋅-induced apoptosis by DIDS, an inhibitor of VDAC channel activity, or anti-VDAC1 antibodies, suggests that O2−⋅-induces Cyto c release via VDAC-dependent permeabilization of the OMM. Moreover, O2−⋅ was found to evoke Cyto c release in VDAC-reconstituted liposomes. In other studies, it was found that ROS-induced alterations of VDAC1 and/or ANT can induce MMP selective for Cyto c release, without causing further mitochondrial damage. In addition, ROS-induced up-regulation of VDAC1 can be prevented by the ROS chelator, epigallocatechin. It has been suggested that ROS-mediated Cyto c and SOD1 release from mitochondria involves VDAC, leading to increased susceptibility of mitochondria to oxidative stress and apoptosis.

Interactions between TSPO and VDAC1 are proposed to play a role in apoptosis (;;; see VDAC and the Translocator Protein). TSPO appears to be involved in the generation of ROS, leading to apoptosis induction. It was hypothesized that the close association of TSPO with VDAC may enhance the concentration of ROS generated by TSPO, leading to apoptosis induction.

NITRIC OXIDE, MITOCHONDRIA, VDAC AND CELL DEATH

Nitric oxide (NO) possesses both pro- and anti-apoptotic effects, depending on both cell type and NO concentration. Specific NO molecular targets include inhibition of Bcl-2 cleavage and inactivation of caspases by S-nitrosylation. At low physiological release rates, NO was found to inhibit PTP opening in a reversible manner, while at high physiological release rates, NO accelerated PTP opening. VDAC1 was found to bind the endothelial NO synthase (eNOS; ). In vitro binding studies using glutathione S-transferase (GST)-tagged VDAC1 indicated that VDAC1 binds directly to eNOS and that this interaction amplified eNOS activity. Furthermore, the calcium ionophores, A23187 and bradykinin, both known to activate eNOS, increased VDAC1–eNOS complex formation, suggesting a potential role for intracellular Ca2+ in mediating this interaction. The above results indicate that the interaction between VDAC and eNOS may be important for regulating eNOS activity and modulation of VDAC by NO. Recently, it has been reported that exogenous NO directly interacts with purified VDAC from rat heart and inhibited its channel activity in a biphasic manner. This inhibition was prevented by a NO scavenger. Channel activity inhibition paralleled the delay in opening of the cardiac PTP by NO.

MITOCHONDRIAL Ca2+ TRANSPORT AND VDAC1

Ca2+ is a ubiquitous cellular signal, with changes in intracellular Ca2+ concentration not only stimulating a number of intercellular events but also triggering cell death pathways, including apoptosis. Ca2+ signals result in the regulation of Ca2+-dependent enzymes, such as phospholipases, proteases, and nucleases, important during injury or cell death. Apart from their metabolic and apoptotic roles, mitochondria are also a major hub of cellular Ca2+ homeostasis. Indeed, mitochondrial Ca2+ homeostasis is fundamental for a wide range of cellular activities, such as control of oxidative phosphorylation, modulation of cytosolic calcium signals, cell death, and secretion. Intra-mitochondrial Ca2+ controls energy metabolism by enhancing the rate of NADH production by modulating critical enzymes, such as those of the TCA cycle and fatty acid oxidation, linking glycolysis to the TCA cycle.

Ca2+ transport across the IMM is mediated by several recently identified proteins. The mitochondrial Ca2+ uniporter (MCU;; ), as well as its regulatory protein, the EF hand-containing protein termed MICU1 (for mitochondrial calcium uptake 1), acting as a Ca2+ sensor that controls mitochondrial Ca2+ entry mediated by the MCU, were identified. The high-affinity mitochondrial Ca2+/H+ exchanger, Letm1, is able to import Ca2+ at low (i.e., sub-micromolar) cytosolic concentrations into energized mitochondria, while the Na+/Ca2+ exchanger superfamily, NCLX, is the major Ca2+ efflux mechanism. All the Ca2+ transport systems described above mediate the transport of Ca2+ across the IMM (Figure 1). However, incoming Ca2+ must first traverse the OMM. The only identified protein mediating Ca2+ transport in the OMM is VDAC1. Indeed, VDAC1 is permeable to Ca2+ and possesses Ca2+-binding sites and it has been shown that control of OMM Ca2+ permeability is mediated by VDAC.

Ca2+, MITOCHONDRIA, APOPTOSIS, AND VDAC

Although changes in mitochondrial Ca2+ concentration are known to trigger apoptosis, the precise mechanism is not known.

VDAC1 is highly Ca2+-permeable and modulates Ca2+ access to the mitochondrial inter-membrane space. Non-physiological Ca2+ overload depolarizes mitochondria by opening the PTP, with concomitant release of Cyto c and other IMS proteins that can lead to both apoptotic and necrotic cell death, associated with disease pathogenesis. Thus, Ca2+ overload disrupts energy production by mitochondria and enables apoptosis and/or necrosis. Ca2+ overload also results in production of ROS. To date, the mitochondrial target for Ca2+ activation of Cyto c release has not been identified. The inhibition of PTP opening by RuR, while protection against cell death induced by several apoptotic stimuli may arise from RuR interaction with VDAC1, inducing channel closure. This is supported by the findings that E72Q-VDAC1 did not interact with RuR and cells expressing this mutant were not protected against apoptosis by RuR. These observations suggest that Ca2+-binding sites in VDAC1 serve regulatory functions, including those involved in apoptosis induction.

ER–MITOCHONDRIA Ca2+ TRANSPORT, VDAC, AND APOPTOSIS

The ER is a dynamic reservoir of Ca2+ ions with electrical or chemical cell stimulation resulting in its activation, highlighting the role of this organelle as an indispensable component of Ca2+ signaling processes. Ca2+ originating from the ER has been shown to be a potent death-inducing signal.

The interplay between ER- and mitochondria-mediated Ca2+ signaling is a determinant of cellular fate through the control of apoptosis and autophagy. Release of Ca2+ from the ER via inositol-1,4,5-trisphosphate receptors (IP3Rs) has been observed in models of apoptosis and has been implicated directly in mitochondrial Ca2+ overload. The specific sites of physical association between the ER and mitochondria, known as mitochondria-associated membranes (MAMs), include VDAC among the proteins present at these junctions. The mitochondrial chaperone, grp75 (glucose-regulated protein 75), has been proposed to mediate the molecular interaction of VDAC1 with the ER Ca2+-release channel, IP3R, and that chaperone-mediated conformational coupling of these proteins enables better transfer of the Ca2+ ions from the ER to the mitochondria. In a cell-free system containing purified mitochondria, ER vesicles, IP3R, and VDAC1, PTP activity was identified as being involved in the ER-triggered pro-apoptotic mitochondrial membrane permeabilization process. It has been recently established that VDAC1 (but not isoforms 2 or 3) selectively interacts with IP3Rs and is preferentially involved in the transmission of low-amplitude apoptotic Ca2+ signals to mitochondria. The involvement of VDAC1 in ER–mitochondria Ca2+ cross-talk places VDAC1 at a crucial position on the route transferring Ca2+ signals from the ER to mitochondria, and thus couples ER and mitochondrial functions.

VDAC AS A PHARMACOLOGICAL TARGET FOR COMPOUNDS AFFECTING CELL PROLIFERATION OR APOPTOSIS

VDAC1, as a multi-functional channel involved both in metabolic homeostasis and apoptosis, can be considered as a prime target for therapeutic agents designed to act via metabolic interference or modulating apoptosis. Indeed, several studies identified pharmacological agents that target VDAC as inducing cancer cell death. These agents can be categorized into the following groups:

ROS-PRODUCING VDAC-DEPENDENT AGENTS

Reactive oxygen species has been shown to promote Cyto c release from mitochondria, thereby inducing apoptotic cell death (see VDAC1 Function in ROS Release, ROS-mediated Apoptosis and Interaction with NO). Currently known drugs acting via enhancing ROS production include FNQs, erastin, and As2O3.

Furanonaphthoquinones were proposed to induce caspase-dependent apoptosis via the production of NADH-dependent ROS. In HeLa cells, FNQs induce mitochondrial swelling, with subsequent apoptosis, while radical scavengers and anti-VDAC1 antibodies reduced this effect, suggesting that FNQ-mediated apoptosis is VDAC-dependent. This claim is further supported by the findings that the ROS production and the anti-cancer activity of FNQs were increased upon VDAC1 over-expression and decreased upon silencing of VDAC1 expression by siRNA. FQNs were found to also up-regulate the pro-apoptotic proteins, Bad, Bax, and Cyto c, while down-regulating the anti-apoptotic proteins, Bcl-2, survivin, and XIAP in A549 cells.

Erastin is a cell-permeable piperazinyl–quinazolinone compound that exhibits oncogene-selective lethality toward cells harboring activating mutations in the RAS–RAF–MEK signaling pathway. Erastin treatment in these cells rapidly induces ROS production and a non-apoptotic form of cell death. Knockdown of vdac2 or vdac3 caused resistance to erastin, suggesting their involvement in the mechanism of action of erastin. It was also reported that RSL5, a compound that has increased lethality in the presence of oncogenic RAS, and erastin induced VDAC3-dependent cell death. Finally, the erastin analog, PRLX 93936, was found to bind VDAC2 and VDAC3 using a proteomics approach. PRLX 93936 is currently in clinical Phase I for treatment of solid tumors.

As2O3, a clinically active anti-leukemia agent reported to inhibit mitochondrial respiratory function, increases ROS generation, and enhances the activity of other O2.- producing agents against cultured leukemia cells and primary leukemia cells isolated from patients.

CHEMICALS THAT DIRECTLY INTERACT WITH AND MODIFY VDAC ACTIVITY

Various compounds interact with VDAC to modify its activity (Table 2). Acrolein (2-propen-1-al), the most reactive of the α,β-unsaturated aldehydes and a toxic compound that was proposed to react with DNA and proteins, preferential binds at p53 mutational hotspots to inhibit DNA repair. Acrolein is a respiratory irritant that is generated during cooking and is abundant in the environment. The compound is also endogenously generated by lipid peroxidation at sites of injury. In pathological conditions associated with oxidative stress, like spinal cord injury and Alzheimer’s disease, levels of acrolein were found to be elevated. Acrolein is reported to enhance carbonylation of VDAC, an event that was found to be significantly increased in the brains of Alzheimer’s disease patients.

Avicins represents a family of triterpenoid saponins, plant stress metabolites that exhibit cytotoxic activity in tumor cells. These compounds possess anti-inflammatory and anti-oxidant properties capable of perturbing mitochondrial function and initiating apoptosis in tumor cells. Avicin G reduces VDAC1 channel conductance, ATP levels, and respiration rates in Jurkat cells.

Cisplatin (cis-diamminedichloro platinum(II)) is a widely used anti-cancer drug that trigger apoptosis. Cisplatin acts by forming inter- and intra-strand nuclear DNA cross-links upon binding. Mitochondria, however, have been implicated as a cisplatin target, leading to apoptosis induction. Cisplatin binds to mitochondrial DNA and VDAC to regulate VDAC activity. Thus, it was proposed that VDAC acts as a cisplatin receptor during apoptosis. Recently it was suggested that over-expression of SCIN, a calcium-dependent actin-binding protein, is a novel cisplatin-resistant marker in the human bladder cancer cell line, HT1376. It was proposed that the high expression of SCIN and its interaction with VDAC mediates resistance to cisplatin.

Endostatin is a naturally occurring 20 kDa C-terminal fragment derived from type XVIII collagen that may interfere with the pro-angiogenic action of growth factors. Endostatin has a wide range of anti-cancer spectrum targets. Decreasing VDAC1 levels by siRNA attenuates endostatin-induced apoptosis, while over-expression of VDAC1 enhances the sensitivity of endothelial cells to endostatin. Endostatin was found to induce PTP opening through VDAC1. These findings point to VDAC1 as endostatin target.

Fluoxetine (also known as Prozac, Sarafem, Fontex) is an anti-depressant, acting as a selective serotonin re-uptake inhibitor and is clinically used to treat different major depressions, obsessive-compulsive disorder, bulimia nervosa, and panic disorders, among other psychiatric conditions. The connection between fluoxetine and apoptosis is clouded by a series of contradictory findings. Fluoxetine was reported to enhance apoptosis in different cancer cells and tumors, yet was suggested to prevent apoptosis in both cancerous and neuronal cells. Fluoxetine was shown to interact with VDAC1 and to increase the voltage-dependence of bilayer-reconstituted VDAC1. Additionally, fluoxetine was shown to prevent PTP opening and inhibited the release of Cyto c and apoptosis. Although its remains unclear as to whether fluoxetine has an anti- or pro-apoptotic effect, it does seem that the compound mediates its effect on apoptosis via interactions with VDAC1.

Oblimersen (G3139) is an 18-mer phosphorothioate anti-sense oligonucleotide being studied as a possible treatment for several types of cancer, including CLL, B cell lymphoma, breast cancer, and melanoma. Although oblimersen is designed to target the initiation codon region of Bcl-2 mRNA, it was found to directly interact with VDAC1 and reduce its channel activity. Oblimersen is reported to induce caspase-dependent apoptosis via the intrinsic mitochondrial pathway in a Bcl-2-independent mechanism.

Geldanamycin (17AAG) is a derivative of the antibiotic, ansamycin. Geldanamycin binds to a conserved pocket in the amino-terminal portion of the Hsp90 chaperone protein and inhibits its function. In vitro, 17AAG acted as a Ca2+ mitochondrial regulator, increasing intracellular Ca2+ and diminishing the plasma membrane cationic current. 17AAG was shown to interact with VDAC through a hydrophobic interaction that was independent of Hsp90. This interaction was proposed to mediate inhibition of glioblastoma cell invasion.

FINAL PERSPECTIVE

In recent years, we have witnessed a switch in the focus of VDAC research from channel activity properties and regulation at the level of purified protein in yeast and Neurospora to studying its function in mammalian cell cultures and animal models. Indeed, a significant accumulation of knowledge is now available concerning VDAC1 function in cell life and death. Much has been learned about VDAC function in regulating metabolite cross-talk between the mitochondria and rest of the cell, its function in mitochondria–ER Ca2+ signaling, its function in apoptosis and its involvement in various maladies from neurodegenerative diseases to cancer. The studies reviewed above have demonstrated the pivotal roles of mitochondria and VDAC1 in cancer. The dual functions of VDAC1 in both metabolism and apoptosis, as mediated by the protein alone and regulated by associated polypeptides, point to VDAC1 as begin a critical target in addressing cancer therapy.

Although a high-resolution structure was determined for recombinant VDAC1, many questions concerning the architecture of the channel pore, the location of modulator-binding sites, the protein regions involved in the control mechanism of VDAC1 oligomerization and how VDAC is regulated to serve its multiple roles remain unanswered. Likewise, additional studies are required to investigate whether the increased dependence of cancer cells on glycolytic metabolism can be exploited therapeutically.

VDAC1 is integral to mitochondrial ATP production as a metabolite transporter, as the docking site for mitochondrial-bound HK, and is highly expressed in cancers. VDAC1 is associated with the mitochondrial pathway of apoptosis, interacting with over-expressed anti-apoptotic proteins present in cancer and mediating the actions of some anti-cancer drugs. In addition, VDAC1 mediates cholesterol transport and distribution in the mitochondrial membrane, with cancer cells exhibiting several fold higher cholesterol levels than do healthy cells. VDAC1 also functions in ROS production and transport to the cytosol, with elevated ROS generation being seen in cancer cells. These functions, together with VDAC1 being over-expressed in some cancer cells, point to VDAC1 as being a rational target for the development of a new generation of therapeutics.

Delineating the molecular mechanisms underlying the re-programmed metabolism seen in cancers and their cell survival strategies, together with increasing understanding of the difficulty in targeting signal transduction in tumors without significant side-effects, encourages prospects for the development of effective cancer therapies. Thus, the emergence of targeted therapies specifically targeting critical molecules important for cancer cells may provide promising means of selectively killing these malignant cells. VDAC1 is one such a target. Indeed, various strategies involving interference RNA to down-regulate VDAC1 expression levels, VDAC1-based peptides and small molecules, such as methyl jasmonate, are being considered in this capacity. Finally, the discovery that VDAC plays a role at critical control points during energy metabolism and in apoptosis points to VDAC as a novel pharmacologic target for anti-cancer drugs.

Conflict of Interest Statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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    Castagna A. Antonioli P. Astner H. Hamdan M. Righetti S. C. Perego P. (2004 ). A proteomic approach to cisplatin resistance in the cervix squamous cell carcinoma cell line A431. Proteomics 4 3246–3267

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    Castedo M. Perfettini J. L. Andreau K. Roumier T. Piacentini M. Kroemer G. (2003 ). Mitochondrial apoptosis induced by the HIV-1 envelope. Ann. N. Y. Acad. Sci. 1010 19–28

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    Certo M. Del Gaizo Moore V. Nishino M. Wei G. Korsmeyer S. Armstrong S. A. (2006 ). Mitochondria primed by death signals determine cellular addiction to antiapoptotic BCL-2 family members. Cancer Cell 9 351–365

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    Cesar Mde C. Wilson J. E. (2004 ). All three isoforms of the voltage-dependent anion channel (VDAC1, VDAC2, and VDAC3) are present in mitochondria from bovine, rabbit, and rat brain. Arch. Biochem. Biophys. 422 191–196

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    Cheng E. H. Sheiko T. V. Fisher J. K. Craigen W. J. Korsmeyer S. J. (2003 ). VDAC2 inhibits BAK activation and mitochondrial apoptosis. Science 301 513–517

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    Cheng S. L. Liu R. H. Sheu J. N. Chen S. T. Sinchaikul S. Tsay G. J. (2007 ). Toxicogenomics of A375 human malignant melanoma cells treated with arbutin. J. Biomed. Sci. 14 87–105

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    Chiou S. H. Chen S. J. Peng C. H. Chang Y. L. Ku H. H. Hsu W. M. (2006 ). Fluoxetine up-regulates expression of cellular FLICE-inhibitory protein and inhibits LPS-induced apoptosis in hippocampus-derived neural stem cell. Biochem. Biophys. Res. Commun. 343 391–400

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    Choudhary O. P. Ujwal R. Kowallis W. Coalson R. Abramson J. Grabe M. (2010 ). The electrostatics of VDAC: implications for selectivity and gating. J. Mol. Biol. 396 580–592

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    Colombini M. (1989 ). Voltage gating in the mitochondrial channel, VDAC. J. Membr. Biol. 111 103–111

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    Colombini M. (2009 ). The published 3D structure of the VDAC channel: native or not? Trends Biochem. Sci. 34 382–389

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    Cory S. Adams J. M. (2002 ). The Bcl2 family: regulators of the cellular life-or-death switch. Nat. Rev. Cancer 2 647–656

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    Cory S. Huang D. C. Adams J. M. (2003 ). The Bcl-2 family: roles in cell survival and oncogenesis. Oncogene 22 8590–8607

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    Costantini P. Jacotot E. Decaudin D. Kroemer G. (2000 ). Mitochondrion as a novel target of anticancer chemotherapy. J. Natl. Cancer Inst. 92 1042–1053

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    Cox D. A. Matlib M. A. (1993 ). A role for the mitochondrial Na(+)-Ca2+ exchanger in the regulation of oxidative phosphorylation in isolated heart mitochondria. J. Biol. Chem. 268 938–947

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    Csordas G. Madesh M. Antonsson B Hajnóczky G. (2002 ). tcBid promotes Ca(2+) signal propagation to the mitochondria: control of Ca(2+) permeation through the outer mitochondrial membrane. EMBO J. 21 2198–2206

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    Cullen K. J. Yang Z. Schumaker L. Guo Z. (2007 ). Mitochondria as a critical target of the chemotheraputic agent cisplatin in head and neck cancer. J. Bioenerg. Biomembr. 39 43–50

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    Dang T. N. Arseneault M. Murthy V. Ramassamy C. (2010 ). Potential role of acrolein in neurodegeneration and in Alzheimer’s disease. Curr. Mol. Pharmacol. 3 66–78

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    Danishuddin M. Khan S. N. Khan A. U. (2009 ). Molecular interactions between mitochondrial membrane proteins and the C-terminal domain of PB1-F2: an in silico approach. J. Mol. Model. 16 535–541

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    da-Silva W. S. Gómez-Puyou A. de Gómez-Puyou M. T. Moreno-Sanchez R. De Felice F. G. de Meis L. (2004 ). Mitochondrial bound hexokinase activity as a preventive antioxidant defense: steady-state ADP formation as a regulatory mechanism of membrane potential and reactive oxygen species generation in mitochondria. J. Biol. Chem. 279 39846–39855

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    Debatin K. M. Poncet D. Kroemer G. (2002 ). Chemotherapy: targeting the mitochondrial cell death pathway. Oncogene 21 8786–8803

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    Decuypere J. P. Monaco G. Missiaen L. De Smedt H. Parys J. B. Bultynck G. (2011 ). IP(3) receptors, mitochondria, and Ca signaling: implications for aging. J. Aging Res. 2011 920178

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    Dejean L. M. Martinez-Caballero S. Guo L. Hughes C. Teijido O. Ducret T. (2005 ). Oligomeric Bax is a component of the putative cytochrome c release channel MAC, mitochondrial apoptosis-induced channel. Mol. Biol. Cell 16 2424–2432

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    Dejean L. M. Martinez-Caballero S. Kinnally K. W. (2006a ). Is MAC the knife that cuts cytochrome c from mitochondria during apoptosis? Cell Death Differ. 13 1387–1395

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    Dejean L. M. Martinez-Caballero S. Manon S. Kinnally K. W. (2006b ). Regulation of the mitochondrial apoptosis-induced channel, MAC, by BCL-2 family proteins. Biochim. Biophys. Acta 1762 191–201

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  106. 106.

    Deniaud A. Sharaf el dein O. Maillier E. Poncet D. Kroemer G. Lemaire C. (2008 ). Endoplasmic reticulum stress induces calcium-dependent permeability transition, mitochondrial outer membrane permeabilization and apoptosis. Oncogene 27 285–299

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    Denning M. F. Wang Y. Tibudan S. Alkan S. Nickoloff B. J. Qin J. Z. (2002 ). Caspase activation and disruption of mitochondrial membrane potential during UV radiation-induced apoptosis of human keratinocytes requires activation of protein kinase C. Cell Death Differ. 9 40–52

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    Denton R. M. (2009 ). Regulation of mitochondrial dehydrogenases by calcium ions. Biochim. Biophys. Acta 1787 1309–1316

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    De Pinto V. Benz R. Palmieri F. (1989 ). Interaction of non-classical detergents with the mitochondrial porin. A new purification procedure and characterization of the pore-forming unit. Eur. J. Biochem. 183 179–187

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    De Pinto V. Guarino F. Guarnera A. Messina A. Reina S. Tomasello F. M. (2010a ). Characterization of human VDAC isoforms: a peculiar function for VDAC3? Biochim. Biophys. Acta 1797 1268–1275

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    De Pinto V. Messina A. Lane D. J. Lawen A. (2010b ). Voltage-dependent anion-selective channel (VDAC) in the plasma membrane. FEBS Lett. 584 1793–1799

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    De Pinto V. Messina A. Accardi R. Aiello R. Guarino F. Tomasello M. F. (2003 ). New functions of an old protein: the eukaryotic porin or voltage dependent anion selective channel (VDAC). Ital. J. Biochem. 52 17–24

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    De Pinto V. Prezioso G. Thinnes F. Link T. A. Palmieri F. (1991 ). Peptide-specific antibodies and proteases as probes of the transmembrane topology of the bovine heart mitochondrial porin. Biochemistry 30 10191–10200

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    De Pinto V. Reina S. Guarino F. Messina A. (2008 ). Structure of the voltage dependent anion channel: state of the art. J. Bioenerg. Biomembr. 40 139–147

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  115. 115.

    De Pinto V. Tomasello F. Messina A. Guarino F. Benz R. La Mendola D. (2007 ). Determination of the conformation of the human VDAC1 N-terminal peptide, a protein moiety essential for the functional properties of the pore. Chembiochem 8 744–756

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    Desagher S. Osen-Sand A. Nichols A. Eskes R. Montessuit S. Lauper S. (1999 ). Bid-induced conformational change of Bax is responsible for mitochondrial cytochrome c release during apoptosis. J. Cell Biol. 144 891–901

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    De Stefani D. Bononi A. Romagnoli A. Messina A. De Pinto V. Pinton P. (2012 ). VDAC1 selectively transfers apoptotic Ca2+ signals to mitochondria. Cell Death Differ. 19 267–273

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    De Stefani D. Raffaello A. Teardo E. Szabò I. Rizzuto R. (2011 ). A forty-kilodalton protein of the inner membrane is the mitochondrial calcium uniporter. Nature 476 336–340

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  119. 119.

    Ding W. Hudson L. G. Liu K. J. (2005 ). Inorganic arsenic compounds cause oxidative damage to DNA and protein by inducing ROS and RNS generation in human keratinocytes. Mol. Cell. Biochem. 279 105–112

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  120. 120.

    Ding W. X. Shen H. M. Ong C. N. (2001 ). Pivotal role of mitochondrial Ca(2+) in microcystin-induced mitochondrial permeability transition in rat hepatocytes. Biochem. Biophys. Res. Commun. 285 1155–1161

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    Distler A. M. Kerner J. Hoppel C. L. (2007 ). Post-translational modifications of rat liver mitochondrial outer membrane proteins identified by mass spectrometry. Biochim. Biophys. Acta 1774 628–636

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    Dlugosz P. J. Billen L. P. Annis M. G. Zhu W. Zhang Z. Lin J. (2006 ). Bcl-2 changes conformation to inhibit Bax oligomerization. EMBO J. 25 2287–2296

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    Dolder M. Zeth K. Tittmann P. Gross H. Welte W. Wallimann T. (1999 ). Crystallization of the human, mitochondrial voltage-dependent anion-selective channel in the presence of phospholipids. J. Struct. Biol. 127 64–71

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    Eskes R. Desagher S. Antonsson B. Martinou J. C. (2000 ). Bid induces the oligomerization and insertion of Bax into the outer mitochondrial membrane. Mol. Cell. Biol. 20 929–935

    Not in our library10.1128/mcb.20.3.929-935.2000

  125. 125.

    Everett H. McFadden G. (2001 ). Viruses and apoptosis: meddling with mitochondria. Virology 288 1–7

    Not in our library10.1006/viro.2001.1081

  126. 126.

    Fadeel B. Ottosson A. Pervaiz S. (2008 ). Big wheel keeps on turning: apoptosome regulation and its role in chemoresistance. Cell Death Differ. 15 443–452

    Not in our library10.1038/sj.cdd.4402265

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    Fanciulli M. Paggi M. G. Bruno T. Del Carlo C. Bonetto F. Gentile F. P. (1994 ). Glycolysis and growth rate in normal and in hexokinase-transfected NIH-3T3 cells. Oncol. Res. 6 405–409

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    Feldmann G. Haouzi D. Moreau A. Durand-Schneider A. M. Bringuier A. Berson A. (2000 ). Opening of the mitochondrial permeability transition pore causes matrix expansion and outer membrane rupture in Fas-mediated hepatic apoptosis in mice. Hepatology 31 674–683

    Not in our library10.1002/hep.510310318

  129. 129.

    Feng Z. Hu W. Hu Y. Tang M. S. (2006 ). Acrolein is a major cigarette-related lung cancer agent: preferential binding at p53 mutational hotspots and inhibition of DNA repair. Proc. Natl. Acad. Sci. U.S.A. 103 15404–15409

    Not in our library10.1073/pnas.0607031103

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    Folkman J. (2006 ). Antiangiogenesis in cancer therapy – endostatin and its mechanisms of action. Exp. Cell Res. 312 594–607

    Not in our library10.1016/j.yexcr.2005.11.015

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    Franklin-Tong V. E. Gourlay C. W. (2008 ). A role for actin in regulating apoptosis/programmed cell death: evidence spanning yeast, plants and animals. Biochem. J. 413 389–404

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    Frick L. R. Rapanelli M. Arcos M. L. Cremaschi G. A. Genaro A. M. (2011 ). Oral administration of fluoxetine alters the proliferation/apoptosis balance of lymphoma cells and up-regulates T cell immunity in tumor-bearing mice. Eur. J. Pharmacol. 659 265–272

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    Fulda S. Galluzzi L. Kroemer G. (2010 ). Targeting mitochondria for cancer therapy. Nat. Rev. Drug Discov. 9 447–464

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    Fulda S. Scaffidi C. Susin S. A. Krammer P. H. Kroemer G. Peter M. E. (1998 ). Activation of mitochondria and release of mitochondrial apoptogenic factors by betulinic acid. J. Biol. Chem. 273 33942–33948

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    Gaikwad A. Poblenz A. Haridas V. Zhang C. Duvic M. Gutterman J. (2005 ). Triterpenoid electrophiles (avicins) suppress heat shock protein-70 and x-linked inhibitor of apoptosis proteins in malignant cells by activation of ubiquitin machinery: implications for proapoptotic activity. Clin. Cancer Res. 11 1953–1962

    Not in our library10.1158/1078-0432.ccr-04-1704

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    Galluzzi L. Kroemer G. (2007 ). Mitochondrial apoptosis without VDAC. Nat. Cell Biol. 9 487–489

    Not in our library10.1038/ncb0507-487

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    Gatenby R. A. Gillies R. J. (2004 ). Why do cancers have high aerobic glycolysis? Nat. Rev. Cancer 4 891–899

    Not in our library10.1038/nrc1478

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    Gauci S. Helbig A. O. Slijper M. Krijgsveld J. Heck A. J. Mohammed S. (2009 ). Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. Anal. Chem. 81 4493–4501

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    Gavish M. Bachman I. Shoukrun R. Katz Y. Veenman L. Weisinger G. (1999 ). Enigma of the peripheral benzodiazepine receptor. Pharmacol. Rev. 51 629–650

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    Gelb B. D. Adams V. Jones S. N. Griffin L. D. MacGregor G. R. McCabe E. R. (1992 ). Targeting of hexokinase 1 to liver and hepatoma mitochondria. Proc. Natl. Acad. Sci. U.S.A. 89 202–206

    Not in our library10.1073/pnas.89.1.202

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    Genini D. Adachi S. Chao Q. Rose D. W. Carrera C. J. Cottam H. B. (2000 ). Deoxyadenosine analogs induce programmed cell death in chronic lymphocytic leukemia cells by damaging the DNA and by directly affecting the mitochondria. Blood 96 3537–3543

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    Gerber D. Shai Y. (2001 ). In vivo detection of hetero-association of glycophorin-A and its mutants within the membrane. J. Biol. Chem. 276 31229–31232

    Not in our library10.1074/jbc.m101889200

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    Geula S. Ben-Hail D. Shoshan-Barmatz V. (2012a ). Structure-based analysis of VDAC1: N-terminus location, translocation, channel gating and association with anti-apoptotic proteins. Biochem. J. 444 475–485

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    Giacomello M. Drago I. Pizzo P. Pozzan T. (2007 ). Mitochondrial Ca2+ as a key regulator of cell life and death. Cell Death Differ. 14 1267–1274

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    Gincel D. Shoshan-Barmatz V. (2004 ). Glutamate interacts with VDAC and modulates opening of the mitochondrial permeability transition pore. J. Bioenerg. Biomembr. 36 179–186

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    Gincel D. Silberberg S. D. Shoshan-Barmatz V. (2000 ). Modulation of the voltage-dependent anion channel (VDAC) by glutamate. J. Bioenerg. Biomembr. 32 571–583

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    Goncalves R. P. Buzhynskyy N. Prima V. Sturgis J. N. Scheuring S. (2007 ). Supramolecular assembly of VDAC in native mitochondrial outer membranes. J. Mol. Biol. 369 413–418

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    Gonzalez-Gronow M. Kalfa T. Johnson C. E. Gawdi G. Pizzo S. V. (2003 ). The voltage-dependent anion channel is a receptor for plasminogen kringle 5 on human endothelial cells. J. Biol. Chem. 278 27312–27318

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    Gottlob K. Majewski N. Kennedy S. Kandel E. Robey R. B. Hay N. (2001 ). Inhibition of early apoptotic events by Akt/PKB is dependent on the first committed step of glycolysis and mitochondrial hexokinase. Genes Dev. 15 1406–1418

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    Han D. Antunes F. Canali R. Rettori D. Cadenas E. (2003 ). Voltage-dependent anion channels control the release of the superoxide anion from mitochondria to cytosol. J. Biol. Chem. 278 5557–5563

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    Haridas V. Li X. Mizumachi T. Higuchi M. Lemeshko V. V. Colombini M. (2007 ). Avicins, a novel plant-derived metabolite lowers energy metabolism in tumor cells by targeting the outer mitochondrial membrane. Mitochondrion 7 234–240

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    Haworth R. A. Hunter D. R. (2000 ). Control of the mitochondrial permeability transition pore by high-affinity ADP binding at the ADP/ATP translocase in permeabilized mitochondria. J. Bioenerg. Biomembr. 32 91–96

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    He L. Lemasters J. J. (2003 ). Heat shock suppresses the permeability transition in rat liver mitochondria. J. Biol. Chem. 278 16755–16760

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    Hinsch K. D. De Pinto V. Aires V. A. Schneider X. Messina A. Hinsch E. (2004 ). Voltage-dependent anion-selective channels VDAC2 and VDAC3 are abundant proteins in bovine outer dense fibers, a cytoskeletal component of the sperm flagellum. J. Biol. Chem. 279 15281–15288

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    Hirsch T. Decaudin D. Susin S. A. Marchetti P. Larochette N. (1998 ). PK11195, a ligand of the mitochondrial benzodiazepine receptor, facilitates the induction of apoptosis and reverses Bcl-2-mediated cytoprotection. Exp. Cell Res. 241 426–434

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    Holmuhamedov E. Lemasters J. J. (2009 ). Ethanol exposure decreases mitochondrial outer membrane permeability in cultured rat hepatocytes. Arch. Biochem. Biophys. 481 226–233

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    Isaacs J. S. Xu W. Neckers L. (2003 ). Heat shock protein 90 as a molecular target for cancer therapeutics. Cancer Cell 3 213–217

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    Israelson A. Zaid H. Abu-Hamad S. Nahon E. Shoshan-Barmatz V. (2008 ). Mapping the ruthenium red-binding site of the voltage-dependent anion channel-1. Cell Calcium 43 196–204

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    Izard C. Libermann C. (1978 ). Acrolein. Mutat. Res. 47 115–138

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    Jenei Z. A. Borthwick K. Zammit V. A. Dixon A. M. (2009 ). Self-association of transmembrane domain 2 (TM2), but not TM1, in carnitine palmitoyltransferase 1A: role of GXXXG(A) motifs. J. Biol. Chem. 284 6988–6997

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    Jiang D. Zhao L. Clapham D. E. (2009 ). Genome-wide RNAi screen identifies Letm1 as a mitochondrial Ca2+/H+ antiporter. Science 326 144–147

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    Jiang N. Kham S. K. Koh G. S. Suang Lim J. Y. Ariffin H. Chew F. T. (2011 ). Identification of prognostic protein biomarkers in childhood acute lymphoblastic leukemia (ALL). J. Proteomics 74 843–157

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    Johnstone R. W. Ruefli A. A. Lowe S. W. (2002 ). Apoptosis: a link between cancer genetics and chemotherapy. Cell 108 153–164

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    Jung J. Y. Han C. R. Jeong Y. J. Kim H. J. Lim H. S. Lee K. H. (2007 ). Epigallocatechin gallate inhibits nitric oxide-induced apoptosis in rat PC12 cells. Neurosci. Lett. 411 222–227

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    Karamouzis M. V. Moschos S. J. (2009 ). The use of endostatin in the treatment of solid tumors. Expert Opin. Biol. Ther. 9 641–648

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    Kayser H. Kratzin H. D. Thinnes F. P. Götz H. Schmidt W. E. Eckart K. (1989 ). Identification of human porins. II. Characterization and primary structure of a 31-lDa porin from human B lymphocytes (Porin 31HL). Biol. Chem. Hoppe Seyler 370 1265–1278

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    Keinan N. Tyomkin D. Shoshan-Barmatz V. (2010 ). Oligomerization of the mitochondrial protein voltage-dependent anion channel is coupled to the induction of apoptosis. Mol. Cell. Biol. 30 5698–5709

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    Kerner J. Lee K. Tandler B. Hoppel C. L. (2012 ). VDAC proteomics: post-translation modifications. Biochim. Biophys. Acta 1818 1520–1525

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    Kim S. C. Sprung R. Chen Y. Xu Y. Ball H. Pei J. (2006 ). Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. Mol. Cell 23 607–618

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    Kim Y. M. Bombeck C. A. Billiar T. R. (1999 ). Nitric oxide as a bifunctional regulator of apoptosis. Circ. Res. 84 253–256

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    Kinnally K. W. Peixoto P. M. Ryu S. Y. Dejean L. M. (2011 ). Is mPTP the gatekeeper for necrosis, apoptosis, or both? Biochim. Biophys. Acta 1813 616–622

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    Ko Y. H. McFadden B. A. (1990 ). Alkylation of isocitrate lyase from Escherichia coli by 3-bromopyruvate. Arch. Biochem. Biophys. 278 373–380

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    Ko Y. H. Pedersen P. L. Geschwind J. F. (2001 ). Glucose catabolism in the rabbit VX2 tumor model for liver cancer: characterization and targeting hexokinase. Cancer Lett. 173 83–91

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    Ko Y. H. Verhoeven H. A. Lee M. J. Corbin D. J. Vogl T. J. Pedersen P. L. (2012 ). A translational study “case report” on the small molecule “energy blocker” 3-bromopyruvate (3BP) as a potent anticancer agent: from bench side to bedside. J. Bioenerg. Biomembr. 44 163–170

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  205. 205.

    Kokoszka J. E. Waymire K. G. Levy S. E. Sligh J. E. Cai J. Jones D. P. (2004 ). The ADP/ATP translocator is not essential for the mitochondrial permeability transition pore. Nature 427 461–465

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    Koppenol W. H. Bounds P. L. Dang C. V. (2011 ). Otto Warburg’s contributions to current concepts of cancer metabolism. Nat. Rev. Cancer 11 325–337

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    Koren I. Raviv Z. Shoshan-Barmatz V. (2010 ). Downregulation of voltage-dependent anion channel-1 expression by RNA interference prevents cancer cell growth in vivo. Cancer Biol. Ther. 9 1046–1052

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    Korkhov V. M. Sachse C. Short J. M. Tate C. G. (2010 ). Three-dimensional structure of TspO by electron cryomicroscopy of helical crystals. Structure 18 677–687

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    Korsmeyer S. J. Wei M. C. Saito M. Weiler S. Oh K. J. Schlesinger P. H. (2000 ). Pro-apoptotic cascade activates BID, which oligomerizes BAK or BAX into pores that result in the release of cytochrome. c. Cell Death Differ. 7 1166–1173

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    Krauskopf A. Eriksson O. Craigen W. J. Forte M. A. Bernardi P. (2006 ). Properties of the permeability transition in VDAC1(–/–) mitochondria. Biochim. Biophys. Acta 1757 590–595

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    Kroemer G. (1997 ). The proto-oncogene Bcl-2 and its role in regulating apoptosis. Nat. Med. 3 614–620

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    Kroemer G. Galluzzi L. Brenner C. (2007 ). Mitochondrial membrane permeabilization in cell death. Physiol. Rev. 87 99–163

    Not in our library10.1152/physrev.00013.2006

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    Kroemer G. Pouyssegur J. (2008 ). Tumor cell metabolism: cancer’s Achilles’ heel. Cancer Cell 13 472–482

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    Kugler W. Veenman L. Shandalov Y. Leschiner S. Spanier I. Lakomek M. (2008 ). Ligands of the mitochondrial 18 kDa translocator protein attenuate apoptosis of human glioblastoma cells exposed to erucylphosphohomocholine. Cell. Oncol. 30 435–450

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  215. 215.

    Kusano H. Shimizu S. Koya R. C. Fujita H. Kamada S. Kuzumaki N. (2000 ). Human gelsolin prevents apoptosis by inhibiting apoptotic mitochondrial changes via closing VDAC. Oncogene 19 4807–4814

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    Kuwana T. Mackey M. R. Perkins G. Ellisman M. H. Latterich M. Schneiter R. (2002 ). Bid, Bax, and lipids cooperate to form supramolecular openings in the outer mitochondrial membrane. Cell 111 331–342

    Not in our library10.1016/s0092-8674(02)01036-x

  217. 217.

    Lai J. C. Tan W. Benimetskaya L. Miller P. Colombini M. Stein C. A. (2006 ). A pharmacologic target of G3139 in melanoma cells may be the mitochondrial VDAC. Proc. Natl. Acad. Sci. U.S.A. 103 7494–7499

    Not in our library10.1073/pnas.0602217103

  218. 218.

    Larochette N. Decaudin D. Jacotot E. Brenner C. Marzo I. Susin S. A. (1999 ). Arsenite induces apoptosis via a direct effect on the mitochondrial permeability transition pore. Exp. Cell Res. 249 413–421

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    Le Bras M. Clément M. V. Pervaiz S. Brenner C. (2005 ). Reactive oxygen species and the mitochondrial signaling pathway of cell death. Histol. Histopathol. 20 205–219

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    Lee A. C. Zizi M. Colombini M. (1994 ). Beta-NADH decreases the permeability of the mitochondrial outer membrane to ADP by a factor of 6. J. Biol. Chem. 269 30974–30980

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    Lee B. Miles P. D. Vargas L. Luan P. Glasco S. Kushnareva Y. (2003 ). Inhibition of mitochondrial Na+-Ca2+ exchanger increases mitochondrial metabolism and potentiates glucose-stimulated insulin secretion in rat pancreatic islets. Diabetes 52 965–973

    Not in our library10.2337/diabetes.52.4.965

  222. 222.

    Lee C. S. Kim Y. J. Jang E. R. Kim W. Myung S. C. (2010 ). Fluoxetine induces apoptosis in ovarian carcinoma cell line OVCAR-3 through reactive oxygen species-dependent activation of nuclear factor-kappaB. Basic Clin. Pharmacol. Toxicol. 106 446–453

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    Lee H. J. Kim J. W. Yim S. V. Kim M. J. Kim S. A. Kim Y. J. (2001 ). Fluoxetine enhances cell proliferation and prevents apoptosis in dentate gyrus of maternally separated rats. Mol. Psychiatry 6 725–728

    Not in our library10.1038/sj.mp.4000954

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    Lemasters J. J. Holmuhamedov E. (2006 ). Voltage-dependent anion channel (VDAC) as mitochondrial governator – thinking outside the box. Biochim. Biophys. Acta 1762 181–190

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    Lemasters J. J. Qian T. Bradham C. A. Brenner D. A. Cascio W. E. Trost L. C. (1999 ). Mitochondrial dysfunction in the pathogenesis of necrotic and apoptotic cell death. J. Bioenerg. Biomembr. 31 305–319

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    Le Mellay V. Troppmair J. Benz R. Rapp U. R. (2002 ). Negative regulation of mitochondrial VDAC channels by C-Raf kinase. BMC Cell Biol. 3 14

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    Lemeshko V. V. Haridas V. Quijano Pérez J. C. Gutterman J. U. (2006 ). Avicins, natural anticancer saponins, permeabilize mitochondrial membranes. Arch. Biochem. Biophys. 454 114–122

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    Levin E. Premkumar A. Veenman L. Kugler W. Leschiner S. Spanier I. (2005 ). The peripheral-type benzodiazepine receptor and tumorigenicity: isoquinoline binding protein (IBP) antisense knockdown in the C6 glioma cell line. Biochemistry 44 9924–9935

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    Li J. Bombeck C. A. Yang S. Kim Y. M. Billiar T. R. (1999 ). Nitric oxide suppresses apoptosis via interrupting caspase activation and mitochondrial dysfunction in cultured hepatocytes. J. Biol. Chem. 274 17325–17333

    Not in our library10.1074/jbc.274.24.17325

  230. 230.

    Li J. Yuan J. (2008 ). Caspases in apoptosis and beyond. Oncogene 27 6194–6206

    Not in our library10.1038/onc.2008.297

  231. 231.

    Li M. Xiao Z. Q. Chen Z. C. Li J. L. Li C Zhang P. F. (2007 ). Proteomic analysis of the aging-related proteins in human normal colon epithelial tissue. J. Biochem. Mol. Biol. 40 72–81

    Not in our library10.5483/bmbrep.2007.40.1.072

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    Lindenboim L. Kringel S. Braun T. Borner C. Stein R. (2005 ). Bak but not Bax is essential for Bcl-xS-induced apoptosis. Cell Death Differ. 12 713–723

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  234. 234.

    Liu S. Ishikawa H. Tsuyama N. Li F. J. Abroun S. Otsuyama K. I. (2006 ). Increased susceptibility to apoptosis in CD45(+) myeloma cells accompanied by the increased expression of VDAC1. Oncogene 25 419–429

    Not in our library10.1038/sj.onc.1208982

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    Llambi F. Green D. R. (2011 ). Apoptosis and oncogenesis: give and take in the BCL-2 family. Curr. Opin. Genet. Dev. 21 12–20

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    Lovell J. F. Billen L. P. Bindner S. Shamas-Din A. Fradin C. Leber B. (2008 ). Membrane binding by tBid initiates an ordered series of events culminating in membrane permeabilization by Bax. Cell 135 1074–1084

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    Lü A. J. Dong C. W. Du C. S. Zhang Q. Y. (2007 ). Characterization and expression analysis of Paralichthys olivaceus voltage-dependent anion channel (VDAC) gene in response to virus infection. Fish Shellfish Immunol. 23 601–613

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    Luo J. Uchida K. Shi R. (2005 ). Accumulation of acrolein-protein adducts after traumatic spinal cord injury. Neurochem. Res. 30 291–295

    Not in our library10.1007/s11064-005-2602-7

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    Maack C. Cortassa S. Aon M. A. Ganesan A. N. Liu T O’Rourke B. (2006 ). Elevated cytosolic Na+ decreases mitochondrial Ca2+ uptake during excitation-contraction coupling and impairs energetic adaptation in cardiac myocytes. Circ. Res. 99 172–182

    Not in our library10.1161/01.res.0000232546.92777.05

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    Mader A. Abu-Hamad S. Arbel N. Gutiérrez-Aguilar M. Shoshan-Barmatz V. (2010 ). Dominant-negative VDAC1 mutants reveal oligomeric VDAC1 to be the active unit in mitochondria-mediated apoptosis. Biochem. J. 429 147–155

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    Madesh M. Hajnoczky G. (2001 ). VDAC-dependent permeabilization of the outer mitochondrial membrane by superoxide induces rapid and massive cytochrome c release. J. Cell Biol. 155 1003–1015

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    Maechler P. Kennedy E. D. Pozzan T. Wollheim C. B. (1997 ). Mitochondrial activation directly triggers the exocytosis of insulin in permeabilized pancreatic beta-cells. EMBO J. 16 3833–3841

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    Majewski N. Nogueira V. Bhaskar P. Coy P. E. Skeen J. E. Gottlob K. (2004a ). Hexokinase-mitochondria interaction mediated by Akt is required to inhibit apoptosis in the presence or absence of Bax and Bak. Mol. Cell 16 819–830

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    Majewski N. Nogueira V. Robey R. B. Hay N. (2004b ). Akt inhibits apoptosis downstream of BID cleavage via a glucose-dependent mechanism involving mitochondrial hexokinases. Mol. Cell. Biol. 24 730–740

    Not in our library10.1128/mcb.24.2.730-740.2004

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    Malia T. J. Wagner G. (2007 ). NMR structural investigation of the mitochondrial outer membrane protein VDAC and its interaction with antiapoptotic Bcl-xL. Biochemistry 46 514–525

    Not in our library10.1021/bi061577h

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    Manda G. Nechifor M. T. Neagu T.-M. (2009 ). Reactive oxygen species, cancer and anti-cancer therapies. Curr. Chem. Biol. 3 342–366

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    Marchetti P. Zamzami N. Joseph B. Schraen-Maschke S. Méreau-Richard C. Costantini P. (1999 ). The novel retinoid 6-[3-(1-adamantyl)-4-hydroxyphenyl]-2-naphtalene carboxylic acid can trigger apoptosis through a mitochondrial pathway independent of the nucleus. Cancer Res. 59 6257–6266

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    Martel C. Allouche M. Esposti D. D. Fanelli E. Boursier C. Henry C. (2012 ). GSK3-mediated VDAC phosphorylation controls outer mitochondrial membrane permeability during lipid accumulation. Hepatology.

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  249. 249.

    Martinez-Abundis E. Correa F. Pavón N. Zazueta C. (2009 ). Bax distribution into mitochondrial detergent-resistant microdomains is related to ceramide and cholesterol content in postischemic hearts. FEBS J. 276 5579–5588

    Not in our library10.1111/j.1742-4658.2009.07239.x

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    Martinez-Caballero S. Dejean L. M. Jonas E. A. Kinnally K. W. (2005 ). The role of the mitochondrial apoptosis induced channel MAC in cytochrome c release. J. Bioenerg. Biomembr. 37 155–164

    Not in our library10.1007/s10863-005-6570-z

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    Martinez-Caballero S. Dejean L. M. Kinnally K. W. (2004 ). Some amphiphilic cations block the mitochondrial apoptosis-induced channel, MAC. FEBS Lett. 568 35–38

    Not in our library10.1016/j.febslet.2004.05.006

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    Martinez-Caballero S. Dejean L. M. Kinnally M. S. Oh K. J. Mannella C. A. Kinnally K. W. (2009 ). Assembly of the mitochondrial apoptosis-induced channel, MAC. J. Biol. Chem. 284 12235–12245

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    Mathupala S. P. Ko Y. H. Pedersen P. L. (2006 ). Hexokinase II: cancer’s double-edged sword acting as both facilitator and gatekeeper of malignancy when bound to mitochondria. Oncogene 25 4777–4786

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    Mathupala S. P. Ko Y. H. Pedersen P. L. (2010 ). The pivotal roles of mitochondria in cancer: Warburg and beyond and encouraging prospects for effective therapies. Biochim. Biophys. Acta 1797 1225–1230

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    Mayevsky A. (2009 ). Mitochondrial function and energy metabolism in cancer cells: past overview and future perspectives. Mitochondrion 9 165–179

    Not in our library10.1016/j.mito.2009.01.009

  256. 256.

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    Not in our library10.1007/bf00769532

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    Mello C. F. Sultana R. Piroddi M. Cai J. Pierce W. M. Klein J. B. (2007 ). Acrolein induces selective protein carbonylation in synaptosomes. Neuroscience 147 674–679

    Not in our library10.1016/j.neuroscience.2007.04.003

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    Menzel V. A. Cassará M. C. Benz R. de Pinto V. Messina A. Cunsolo V. (2009 ). Molecular and functional characterization of VDAC2 purified from mammal spermatozoa. Biosci. Rep. 29 351–362

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    Messina A. Reina S. Guarino F De Pinto V. (2012 ). VDAC isoforms in mammals. Biochim. Biophys. Acta 1818 1466–1476

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    Miura N. Takemori N. Kikugawa T. Tanji N. Higashiyama S. Yokoyama M. (2012 ). Adseverin: a novel cisplatin-resistant marker in the human bladder cancer cell line HT1376 identified by quantitative proteomic analysis. Mol. Oncol. 6 311–322

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    Mlayeh L. Chatkaew S. Léonetti M Homblé F. (2010 ). Modulation of plant mitochondrial VDAC by phytosterols. Biophys. J. 99 2097–2106

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    Moin S. M. Panteva M. Jameel S. (2007 ). The hepatitis E virus Orf3 protein protects cells from mitochondrial depolarization and death. J. Biol. Chem. 282 21124–21133

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    Nahon E. Israelson A. Abu-Hamad S. Varda S. B. (2005 ). Fluoxetine (Prozac) interaction with the mitochondrial voltage-dependent anion channel and protection against apoptotic cell death. FEBS Lett. 579 5105–5110

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    Nawarak J. Huang-Liu R. Kao S. H. Liao H. H. Sinchaikul S. Chen S. T. (2009 ). Proteomics analysis of A375 human malignant melanoma cells in response to arbutin treatment. Biochim. Biophys. Acta 1794 159–167

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    Not in our library10.1085/jgp.200409154

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    Ott M. Robertson J. D. Gogvadze V. Zhivotovsky B. Orrenius S. (2002 ). Cytochrome c release from mitochondria proceeds by a two-step process. Proc. Natl. Acad. Sci. U.S.A. 99 1259–1263

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    Ozaki T. Yamashita T. Ishiguro S. (2009 ). Mitochondrial m-calpain plays a role in the release of truncated apoptosis-inducing factor from the mitochondria. Biochim. Biophys. Acta 1793 1848–1859

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    Palty R. Silverman W. F. Hershfinkel M. Caporale T. Sensi S. L. Parnis J. (2010 ). NCLX is an essential component of mitochondrial Na+/Ca2+ exchange. Proc. Natl. Acad. Sci. U.S.A. 107 436–441

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  284. 284.

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    Pastorino J. G. Simbula G. Gilfor E. Hoek J. B. Farber J. L. (1994 ). Protoporphyrin IX, an endogenous ligand of the peripheral benzodiazepine receptor, potentiates induction of the mitochondrial permeability transition and the killing of cultured hepatocytes by rotenone. J. Biol. Chem. 269 31041–31046

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    Pedersen P. L. (2007 ). Warburg, me and Hexokinase 2: multiple discoveries of key molecular events underlying one of cancers’ most common phenotypes, the “Warburg effect”, i.e., elevated glycolysis in the presence of oxygen. J. Bioenerg. Biomembr. 39 211–222

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  289. 289.

    Peixoto P. M. Dejean L. M. Kinnally K. W. (2012 ). The therapeutic potential of mitochondrial channels in cancer, ischemia-reperfusion injury, and neurodegeneration. Mitochondrion 12 14–23

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  290. 290.

    Pelicano H. Feng L. Zhou Y. Carew J. S. Hileman E. O. Plunkett W. (2003 ). Inhibition of mitochondrial respiration: a novel strategy to enhance drug-induced apoptosis in human leukemia cells by a reactive oxygen species-mediated mechanism. J. Biol. Chem. 278 37832–37839

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    Penso J. Beitner R. (1998 ). Clotrimazole and bifonazole detach hexokinase from mitochondria of melanoma cells. Eur. J. Pharmacol. 342 113–117

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    Pereira da Silva A. P. El-Bacha T. Kyaw N. dos Santos R. S. da-Silva W. S. Almeida F. C. (2009 ). Inhibition of energy-producing pathways of HepG2 cells by 3-bromopyruvate. Biochem. J. 417 717–726

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    Perfettini J. L. Castedo M. Roumier T. Andreau K. Nardacci R. Piacentini M. (2005 ). Mechanisms of apoptosis induction by the HIV-1 envelope. Cell Death Differ. 12(Suppl. 1) 916–923

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    Petrosillo G. Ruggiero F. M. Paradies G. (2003 ). Role of reactive oxygen species and cardiolipin in the release of cytochrome c from mitochondria. FASEB J. 17 2202–2208

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    Petrosillo G. Ruggiero F. M. Pistolese M. Paradies G. (2001 ). Reactive oxygen species generated from the mitochondrial electron transport chain induce cytochrome c dissociation from beef-heart submitochondrial particles via cardiolipin peroxidation. Possible role in the apoptosis. FEBS Lett. 509 435–438

    Not in our library10.1016/s0014-5793(01)03206-9

  296. 296.

    Pinton P. Giorgi C. Siviero R. Zecchini E. Rizzuto R. (2008 ). Calcium and apoptosis: ER–mitochondria Ca2+ transfer in the control of apoptosis. Oncogene 27 6407–6418

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  297. 297.

    Priault M. Chaudhuri B. Clow A. Camougrand N. Manon S. (1999 ). Investigation of bax-induced release of cytochrome c from yeast mitochondria permeability of mitochondrial membranes, role of VDAC and ATP requirement. Eur. J. Biochem. 260 684–691

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  298. 298.

    Pro B. Leber B. Smith M. Fayad L. Romaguera J. Hagemeister F. (2008 ). Phase II multicenter study of oblimersen sodium, a Bcl-2 antisense oligonucleotide, in combination with rituximab in patients with recurrent B-cell non-Hodgkin lymphoma. Br. J. Haematol. 143 355–360

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  299. 299.

    Qiao H. McMillan J. R. (2007 ). Gelsolin segment 5 inhibits HIV-induced T-cell apoptosis via Vpr-binding to VDAC. FEBS Lett. 581 535–540

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  300. 300.

    Rahmani Z. Huh K. W. Lasher R. Siddiqui A. (2000 ). Hepatitis B virus X protein colocalizes to mitochondria with a human voltage-dependent anion channel, HVDAC3, and alters its transmembrane potential. J. Virol. 74 2840–2846

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    Ralph S. J. Rodríguez-Enríquez S. Neuzil J. Saavedra E Moreno-Sánchez R. (2010 ). The causes of cancer revisited: “mitochondrial malignancy” and ROS-induced oncogenic transformation – why mitochondria are targets for cancer therapy. Mol. Aspects Med. 31 145–170

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    Rapizzi E. Pinton P. Szabadkai G. Wieckowski M. R. Vandecasteele G. Baird G. (2002 ). Recombinant expression of the voltage-dependent anion channel enhances the transfer of Ca2+ microdomains to mitochondria. J. Cell Biol. 159 613–624

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    Ravagnan L. Marzo I. Costantini P. Susin S. A. Zamzami N. Petit P. X. (1999 ). Lonidamine triggers apoptosis via a direct, Bcl-2-inhibited effect on the mitochondrial permeability transition pore. Oncogene 18 2537–2546

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    Reed J. C. (2006 ). Proapoptotic multidomain Bcl-2/Bax-family proteins: mechanisms, physiological roles, and therapeutic opportunities. Cell Death Differ. 13 1378–1386

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    Reina S. Palermo V. Guarnera A. Guarino F. Messina A. Mazzoni C. (2010 ). Swapping of the N-terminus of VDAC1 with VDAC3 restores full activity of the channel and confers anti-aging features to the cell. FEBS Lett. 584 2837–2844

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  307. 307.

    Reymann S. Buzhynskyy N. Prima V. Sturgis J. N. Scheuring S. (1995 ). Further evidence for multitopological localization of mammalian porin (VDAC) in the plasmalemma forming part of a chloride channel complex affected in cystic fibrosis and encephalomyopathy. Biochem. Mol. Med. 54 75–87

    Not in our library10.1006/bmme.1995.1011

  308. 308.

    Rom J. von Minckwitz G. Marmé F. Ataseven B. Kozian D. Sievert M. (2009 ). Phase I study of apoptosis gene modulation with oblimersen within preoperative chemotherapy in patients with primary breast cancer. Ann. Oncol. 20 1829–1835

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    Romagnoli R. Baraldi P. G. Lopez-Cara C. Cruz-Lopez O. Carrion M. D. Kimatrai Salvador M. (2011 ). Synthesis and antitumor molecular mechanism of agents based on amino 2-(3′,4′,5′-trimethoxybenzoyl)benzo[b]furan: inhibition of tubulin and induction of apoptosis. ChemMedChem 6 1841–1853

    Not in our library10.1002/cmdc.201100279

  310. 310.

    Roman I. Figys J. Steurs G. Zizi M. (2006 ). Direct measurement of VDAC-actin interaction by surface plasmon resonance. Biochim. Biophys. Acta 1758 479–486

    Not in our library10.1016/j.bbamem.2006.03.019

  311. 311.

    Rone M. B. Fan J. Papadopoulos V. (2009 ). Cholesterol transport in steroid biosynthesis: role of protein–protein interactions and implications in disease states. Biochim. Biophys. Acta 1791 646–658

    Not in our library10.1016/j.bbalip.2009.03.001

  312. 312.

    Rosano C. (2011 ). Molecular model of hexokinase binding to the outer mitochondrial membrane porin (VDAC1): implication for the design of new cancer therapies. Mitochondrion 11 513–519

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    Rose I. A. O’Connell E. L. Litwin S. (1974 ). Determination of the rate of hexokinase-glucose dissociation by the isotope-trapping method. J. Biol. Chem. 249 5163–5168

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    Rostovtseva T. K. Antonsson B. Suzuki M. Youle R. J. Colombini M. Bezrukov S. M. (2004 ). Bid, but not Bax, regulates VDAC channels. J. Biol. Chem. 279 13575–13583

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  315. 315.

    Rostovtseva T. K. Bezrukov S. M. (2012 ). VDAC inhibition by tubulin and its physiological implications. Biochim. Biophys. Acta 1818 1526–1535

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    Rostovtseva T. K. Komarov A. Bezrukov S. M. Colombini M. (2002 ). Dynamics of nucleotides in VDAC channels: structure-specific noise generation. Biophys. J. 82(Pt 1) 193–205

    Not in our library10.1016/s0006-3495(02)75386-1

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    Rostovtseva T. K. Petrache H. I. Kazemi N. Hassanzadeh E. Bezrukov S. M. (2008a ). Interfacial polar interactions affect gramicidin channel kinetics. Biophys J. 94 L23–L25

    Not in our library10.1529/biophysj.107.120261

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    Rostovtseva T. K. Sheldon K. L. Hassanzadeh E. Monge C. Saks V. Bezrukov S. M. (2008b ). Tubulin binding blocks mitochondrial voltage-dependent anion channel and regulates respiration. Proc. Natl. Acad. Sci. U.S.A. 105 18746–18751

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  320. 320.

    Saddar S. Stuart R. A. (2005 ). The yeast F(1)F(0)-ATP synthase: analysis of the molecular organization of subunit g and the importance of a conserved GXXXG motif. J. Biol. Chem. 280 24435–24442

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    Sahasrabudhe S. R. Lai S. Pierce M. Clemens C. Venkat R. Rebentisch M. (2008 ). Selective in vitro and in vivo anti-tumor activity of PRLX 93936 in biological models of melanoma and ovarian cancer. J. Clin. Oncol. 26(Suppl.) Abstr. 14586

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    Saks V. Guzun R. Timohhina N. Tepp K. Varikmaa M. Monge C. (2010 ). Structure–function relationships in feedback regulation of energy fluxes in vivo in health and disease: mitochondrial interactosome. Biochim. Biophys. Acta 1797 678–697

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    Sampson M. J. Decker W. K. Beaudet A. L. Ruitenbeek W. Armstrong D. Hicks M. J. (2001 ). Immotile sperm and infertility in mice lacking mitochondrial voltage-dependent anion channel type 3. J. Biol. Chem. 276 39206–39212

    Not in our library10.1074/jbc.m104724200

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    Sampson M. J. Lovell R. S. Craigen W. J. (1997 ). The murine voltage-dependent anion channel gene family. Conserved structure and function. J. Biol. Chem. 272 18966–18973

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    Santin G. Piccolini V. M. Veneroni P. Barni S. Bernocchi G. Bottone M. G. (2011 ). Different patterns of apoptosis in response to cisplatin in B50 neuroblastoma rat cells. Histol. Histopathol. 26 831–842

    Not in our library10.14670/hh-26.831

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    Santo-Domingo J. Demaurex N. (2010 ). Calcium uptake mechanisms of mitochondria. Biochim. Biophys. Acta 1797 907–912

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    Schlattner U. Dolder M. Wallimann T. Tokarska-Schlattner M. (2001 ). Mitochondrial creatine kinase and mitochondrial outer membrane porin show a direct interaction that is modulated by calcium. J. Biol. Chem. 276 48027–48030

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    Schneider R. Etzkorn M. Giller K. Daebel V. Eisfeld J. Zweckstetter M. (2010 ). The native conformation of the human VDAC1 N terminus. Angew. Chem. Int. Ed. Engl. 49 1882–1885

    Not in our library10.1002/anie.200906241

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    Schwarzer C. Barnikol-Watanabe S. Thinnes F. P. Hilschmann N. (2002 ). Voltage-dependent anion-selective channel (VDAC) interacts with the dynein light chain Tctex1 and the heat-shock protein PBP74. Int. J. Biochem. Cell Biol. 34 1059–1070

    Not in our library10.1016/s1357-2725(02)00026-2

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    Schwer B. Eckersdorff M. Li Y. Silva J. C. Fermin D. Kurtev M. V. (2009 ). Calorie restriction alters mitochondrial protein acetylation. Aging Cell 8 604–606

    Not in our library10.1111/j.1474-9726.2009.00503.x

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    Scorrano L. Oakes S. A. Opferman J. T. Cheng E. H. Sorcinelli M. D. Pozzan T. (2003 ). BAX and BAK regulation of endoplasmic reticulum Ca2+: a control point for apoptosis. Science 300 135–139

    Not in our library10.1126/science.1081208

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    Sentman C. L. Shutter J. R. Hockenbery D. Kanagawa O. Korsmeyer S. J. (1991 ). bcl-2 inhibits multiple forms of apoptosis but not negative selection in thymocytes. Cell 67 879–888

    Not in our library10.1016/0092-8674(91)90361-2

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    Shi H. Hudson L. G. Ding W. Wang S. Cooper K. L. Liu S. (2004 ). Arsenite causes DNA damage in keratinocytes via generation of hydroxyl radicals. Chem. Res. Toxicol. 17 871–878

    Not in our library10.1021/tx049939e

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    Shi Y. Chen J. Weng C. Chen R. Zheng Y. Chen Q. (2003a ). Identification of the protein–protein contact site and interaction mode of human VDAC1 with Bcl-2 family proteins. Biochem. Biophys. Res. Commun. 305 989–996

    Not in our library10.1016/s0006-291x(03)00871-4

  335. 335.

    Shi Y. Jiang C. Chen Q. Tang H. (2003b ). One-step on-column affinity refolding purification and functional analysis of recombinant human VDAC1. Biochem. Biophys. Res. Commun. 303 475–482

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  338. 338.

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    Shirakata Y. Koike K. (2003 ). Hepatitis B virus X protein induces cell death by causing loss of mitochondrial membrane potential. J. Biol. Chem. 278 22071–22078

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  394. 394.

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  398. 398.

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    Verkhratsky A. Petersen O. H. (2002 ). The endoplasmic reticulum as an integrating signalling organelle: from neuronal signalling to neuronal death. Eur. J. Pharmacol. 447 141–154

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    Wei M. C. Lindsten T. Mootha V. K. Weiler S. Gross A. Ashiya M. (2000 ). tBID, a membrane-targeted death ligand, oligomerizes BAK to release cytochrome c. Genes Dev. 14 2060–2071

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    Wei M. C. Zong W. X. Cheng E. H. Lindsten T. Panoutsakopoulou V. Ross A. J. (2001 ). Proapoptotic BAX and BAK: a requisite gateway to mitochondrial dysfunction and death. Science 292 727–730

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    Whittington D. A. Waheed A. Ulmasov B. Shah G. N. Grubb J. H. Sly W. S. (2001 ). Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells. Proc. Natl. Acad. Sci. U.S.A. 98 9545–9550

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  413. 413.

    Wigdal S. S. Kirkland R. A. Franklin J. L. Haak-Frendscho M. (2002 ). Cytochrome c release precedes mitochondrial membrane potential loss in cerebellar granule neuron apoptosis: lack of mitochondrial swelling. J. Neurochem. 82 1029–1038

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  414. 414.

    Wong D. T. Bymaster F. P. Engleman E. A. (1995 ). Prozac (fluoxetine, Lilly 110140), the first selective serotonin uptake inhibitor and an antidepressant drug: twenty years since its first publication. Life Sci. 57 411–441

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  417. 417.

    Xie G. Wilson J. E. (1990 ). Tetrameric structure of mitochondrially bound rat brain hexokinase: a crosslinking study. Arch. Biochem. Biophys. 276 285–293

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    Not in our library10.1073/pnas.1015181108

  419. 419.

    Xu X. Decker W. Sampson M. J. Craigen W. J. Colombini M. (1999 ). Mouse VDAC isoforms expressed in yeast: channel properties and their roles in mitochondrial outer membrane permeability. J. Membr. Biol. 170 89–102

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    Xu X. Forbes J. G. Colombini M. (2001 ). Actin modulates the gating of Neurospora crassa VDAC. J. Membr. Biol. 180 73–81

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  421. 421.

    Yagoda N. von Rechenberg M. Zaganjor E. Bauer A. J. Yang W. S. Fridman D. J. (2007 ). RAS-RAF-MEK-dependent oxidative cell death involving voltage-dependent anion channels. Nature 447 864–868

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  422. 422.

    Yamamoto T. Yamada A. Watanabe M. Yoshimura Y. Yamazaki N. Yoshimura Y. (2006 ). VDAC1, having a shorter N-terminus than VDAC2 but showing the same migration in an SDS-polyacrylamide gel, is the predominant form expressed in mitochondria of various tissues. J. Proteome Res. 5 3336–3344

    Not in our library10.1021/pr060291w

  423. 423.

    Yang L. Vaitheesvaran B. Hartil K. Robinson A. J. Hoopmann M. R. Eng J. K. (2011 ). The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching. J. Proteome Res. 10 4134–4149

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    Yang W. S. Stockwell B. R. (2008 ). Synthetic lethal screening identifies compounds activating iron-dependent, nonapoptotic cell death in oncogenic-RAS-harboring cancer cells. Chem. Biol. 15 234–245

    Not in our library10.1016/j.chembiol.2008.02.010

  425. 425.

    Yang Z. Schumaker L. M. Egorin M. J. Zuhowski E. G. Guo Z. Cullen K. J. (2006 ). Cisplatin preferentially binds mitochondrial DNA and voltage-dependent anion channel protein in the mitochondrial membrane of head and neck squamous cell carcinoma: possible role in apoptosis. Clin. Cancer Res. 12 5817–5825

    Not in our library10.1158/1078-0432.ccr-06-1037

  426. 426.

    Yehezkel G. Abu-Hamad S. Shoshan-Barmatz V. (2007 ). An N-terminal nucleotide-binding site in VDAC1: involvement in regulating mitochondrial function. J. Cell. Physiol. 212 551–561

    Not in our library10.1002/jcp.21048

  427. 427.

    Yehezkel G. Hadad N. Zaid H. Sivan S. Shoshan-Barmatz V. (2006 ). Nucleotide-binding sites in the voltage-dependent anion channel: characterization and localization. J. Biol. Chem. 281 5938–5946

    Not in our library10.1074/jbc.m510104200

  428. 428.

    Yin X. M. (2000 ). Signal transduction mediated by Bid, a pro-death Bcl-2 family proteins, connects the death receptor and mitochondria apoptosis pathways. Cell Res. 10 161–167

    Not in our library10.1038/sj.cr.7290045

  429. 429.

    Yoo N. J. Park S. W. Lee S. H. (2011 ). A frameshift mutation of the pro-apoptotic VDAC1 gene in cancers with microsatellite instability. Gut Liver 5 548–549

    Not in our library10.5009/gnl.2011.5.4.548

  430. 430.

    Youle R. J. Strasser A. (2008 ). The BCL-2 protein family: opposing activities that mediate cell death. Nat. Rev. Mol. Cell Biol. 9 47–59

    Not in our library10.1038/nrm2308

  431. 431.

    Yu W. H. Forte M. (1996 ). Is there VDAC in cell compartments other than the mitochondria? J. Bioenerg. Biomembr. 28 93–100

    Not in our library10.1007/bf02110638

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    Yuan H. Williams S. D. Adachi S. Oltersdorf T. Gottlieb R. A. (2003 ). Cytochrome c dissociation and release from mitochondria by truncated Bid and ceramide. Mitochondrion 2 237–244

    Not in our library10.1016/s1567-7249(02)00106-x

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    Yuan S. Galluzzi L. Kepp O. Hangen E. Morselli E. Senovilla L. (2008 ). Voltage-dependent anion channel 1 is involved in endostatin-induced endothelial cell apoptosis. FASEB J. 22 2809–2820

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