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Selenium nanoparticles alleviate ischemia reperfusion injury-induced acute kidney injury by modulating GPx-1/NLRP3/Caspase-1 pathway

Shaobo Wang, Yin Chen, Songling Han and 7 more

Theranostics · 2022

doi:10.7150/thno.70830

Abstract

Rationale: Acute kidney injury (AKI) is a common critical illness in the clinic and currently lacks effective treatment options.Ischemia reperfusion injury (IRI) is a major pathogenic factor for AKI.Due to the deficiency of selenium (Se) in AKI patients, we intended to treat IRI-induced AKI using a Se rebalancing strategy in the present study.Methods: Sodium selenate, ascorbic acid, and bovine serum albumin (BSA) were employed to prepare nanomaterials termed Se@BSA nanoparticles (NPs) using a simple method.Experiments with human renal tubular epithelial HK-2 cells exposed to hypoxia/reoxygenation (H/R) and IRI-AKI mice were used to evaluate the therapeutic efficiency of Se@BSA NPs.Transcriptome sequencing, further molecular biology experiments, and pathologic analysis were performed to investigate the underlying mechanisms.Results: Se@BSA NPs accumulated in mouse kidneys and could be endocytosed by renal tubular epithelial cells after intravenous administration.In vitro studies showed that Se@BSA NP treatment markedly increased the levels of glutathione peroxidase (GPx)-1 and suppressed NLRP3 inflammasome activation in H/R cells, which resulted in reductions in the proteolytic cleavage of pro-Caspase-1 into active Caspase-1 and the maturation of inflammatory factors.Mouse experiments confirmed these findings and demonstrated an inspiring mitigative effect of Se@BSA NPs on IRI-induced AKI.Owing to modulation of the GPx-1/NLRP3/Caspase-1 pathway, Se@BSA NPs dramatically inhibited fibrosis formation after AKI.Conclusion: This study provides an effective therapeutic option by applying easy-to-produce Se-containing nanomaterials to remedy Se imbalance and impede inflammatory responses in the kidney, which is a promising candidate for AKI treatment.

Full text

From PubMed Central, U.S. National Library of Medicine, as current on Oct 26, 2026. Paragraph numbers are ours, so an answer can point at one.

Introduction

Acute kidney injury (AKI) is an urgent and severe disease observed in the clinic with high incidence and mortality, particularly for patients in the intensive care unit. Ischemia reperfusion injury (IRI), which causes renal injuries by inducing microvascular dysfunctions, mitochondrial damage, and the production of large amounts of reactive oxygen species (ROS) and proinflammatory cytokines,, is one of the major etiological factors for AKI. The renal function of AKI patients rapidly deteriorates, manifesting as a reduction in the glomerular filtration rate and in the fluid and electrolyte imbalance and the accumulation of metabolic waste. Despite its limited effectiveness, the current treatment option for AKI is renal replacement therapy, which necessitates the development of effective alternative schemes.

The human body is a highly complex and balanced system, and tip the balance may result in illness, as exemplified by the occurrence of hypovitaminosis and iron-deficiency anemia,. Encouragingly, rebalancing nutrient and molecular homeostasis is a useful therapeutic strategy. For instance, as AKI patients have a significant reduction in the levels of anti-inflammatory protein Klotho, which is abundant in the kidney, Klotho supplementation is instrumental in ameliorating AKI. Selenium (Se) is an essential trace element abundant in the kidney and is incorporated into selenoproteins, including glutathione peroxidases (GPxs). GPx-1 is known to be primarily expressed in healthy kidneys and accounts for almost all (> 96%) renal GPx activity. Previous studies showed that GPx-1 acted as an endogenous renoprotective agent but its expression was decreased after Se deficiency, which aggravates mesangial matrix expansion and pro-inflammatory responses. Considering the deficiency of Se in AKI patients, we proposed a treatment option by Se supplementation.

Selenium is instrumental for the prevention of diseases including cardiovascular disease, arthritis, cystic fibrosis, and cancers. Despite its wide use in dietary supplements, Se has a narrow therapeutic window with delicate toxicity margins. Selenium nanoparticles (SeNPs) have higher biocompatibilities than those of the inorganic and organic forms of Se and thus are alternatives for nutritional supplementation. Due to the important role of Se in stabilizing the immune system and activating host defense responses, SeNPs have advantages over other nanomaterials. There are increasing data demonstrating that SeNPs hold inspiring antimicrobial, antitumor,, and antidiabetic properties, making the nanomaterial a hotspot for development into therapeutics. Additionally, SeNPs exhibit good prospects for their application in rapid diagnosis methods and even in the current COVID-19 pandemic.

Because the zero valence state of Se (Se0) exhibits lower toxicity than that of selenate (SeII), selenite (SeIV), or selenate (SeVI) ions,, Se0 in the nano form is a promising candidate for biomedical applications. Generally, Se0-containing nanomaterials can be prepared using physical, chemical, and biological techniques. To simplify the preparation process, we fabricated a nanomaterial termed Se@BSA NPs using one-step chemical synthesis. Cell and mouse experiments were employed to evaluate the therapeutic effect of Se@BSA NPs on IRI-AKI. The underlying mechanisms were investigated by RNA-seq, other molecular biology experiments, and pathologic analysis. Se@BSA NPs act as biocompatible Se supplements to increase GPx-1 levels in injured kidneys, resulting in suppressions of NLRP3 inflammasome activation and the maturation of inflammatory factors. Accordingly, the easy-to-produce Se-containing nanomaterials are promising drug candidates for IRI-AKI treatment.

Preparation and characterization of Se@BSA NPs

Sodium selenate was reduced by ascorbic acid at a molar ratio of 1:2. To decrease the aggregation of the products, BSA was added for stabilization due to its biocompatibility and ease of acquisition (Figure 1A). The prepared compounds collected by dialysis were spherical particles with a preferable dispersity in solution and had an approximate size of 80 nm (Figure 1B). Energy dispersive X-ray spectroscopy (EDS) confirmed the presence of Se and S elements (Figure 1C). The Se content in the NPs was 17.7 μg/mg, as measured by inductively coupled plasma-mass spectrometry (ICP-MS). X-ray photoelectron spectroscopy (XPS, Figure 1D) indicated that Se presented as the zero valence state in the NPs. Fourier transform-infrared spectrometry (FT-IR, Figure 1E) and sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE, Figure S1) further revealed the existence of BSA. The average diameter of the negatively charged nanomaterial (-16.57 ± 1.27 mV, Figure 1F) termed Se@BSA NP was 88.4 nm, as determined by dynamic light scattering (DLS) (Figure 1G, polydispersity index: 0.25). Different batches of the products prepared on different days had comparable ζ-potentials and diameters (Figure S2). Se@BSA NPs were stable in PBS (pH: 7.4, Figure 1F-G), which laid a good foundation for the subsequent functional evaluation.

Biocompatibility and biodistribution of Se@BSA NPs

Se@BSA NPs were nontoxic to human renal tubular epithelial HK-2 cells (Figure 2A) and did not induce hemolysis at doses up to 200 μg/mL (Figure 2B, based on the weight of NPs). Intravenous injection (I.V.) of 20 mg/kg Se@BSA NPs was innocuous to C57 mice. There were no significant differences in body weight (Figure S3), serum alanine aminotransferase (ALT) and aspartate aminotransferase (AST) contents (Figure S4), or creatinine (CRE) and blood urea nitrogen (BUN) levels (Figure 2C-D) between the groups after 7 days. Mouse hemogram was also determined, and the results showed that Se@BSA NPs did not influence the red blood cell, white blood cell, and platelet counts or the hemoglobin content in mouse blood (Figure S5). No pathological changes were observed in vital organs, including the heart, liver, spleen, lungs, and kidneys (Figure 2E), which indicated the biocompatibility of Se@BSA NPs in vivo.

To investigate the biodistribution of Se@BSA NPs in vivo, mice were given 1 mg/kg Se@BSA NPs by intravenous injection. It was found that the NPs were almost eliminated from blood after 24 h (Figure S6). Fluorescence imaging showed that Se@BSA NPs, which were probed by fluorescein isothiocyanate (FITC), were primarily distributed in mouse kidneys and liver (Figure 2F), consistent with the results revealed by ICP-MS (Figure 2G). The kidneys maintained a high level of Se@BSA NPs, particularly 24 h after the initial injection, which was in accord with the accumulation of Ceria NPs in AKI mice. Due to endocytosis by renal tubular epithelial cells (Figure 2H and Figure S7), Se@BSA NPs mostly accumulated in the renal tubules, as FITC-labeled NPs were colocalized with aquaporin 1 (AQP1, Figure 2I), a recognized marker for renal proximal tubules. Since tubulointerstitial inflammation is a common characteristic of AKI, the distribution of Se@BSA NPs in renal tubules allowed a potential application in AKI treatment.

Mitigation of IRI-AKI by Se@BSA NPs

By clamping the renal pedicles of C57 mice for 35 min as previously described, we established an IRI-induced AKI model to evaluate the therapeutic efficacy of Se@BSA NPs (0.1, 0.5, and 1 mg/kg, I.V.). The mice were sacrificed for analysis at 24 h after tail vein injection (Figure 3A). The Se content in the kidneys of IRI-AKI mice was dramatically decreased (Figure 3B). Consistently, IRI caused overt kidney injury, manifested by higher CRE and BUN levels in IRI-AKI mice than in healthy mice (P < 0.001, Figure 3C). Se@BSA NP treatment alleviated Se deficiency and injury in a dose-dependent manner. Pathologic analysis indicated that IRI caused a large area of renal congestion (Figure 3D) and tubule injury (Figure 3E and Figure S8), which were both relieved by Se@BSA NPs (1 mg/kg, I.V.). The mRNA expression of kidney injury molecule (Kim)-1 was also detected. The results showed that Kim-1 was highly expressed in IRI-AKI mice but its levels were dramatically decreased after Se@BSA NP treatment (P < 0.001, Figure 3F). Western blotting (Figure 3G) and immunohistochemistry (Figure 3H) congruously confirmed this conclusion at the protein level. It is plausible that Se@BSA NPs are equipped with dramatic capacities to mitigate IRI-AKI in vivo.

Suppression of NLRP3 inflammasome activation by Se@BSA NPs

To gain insight into the underlying mechanisms of Se@BSA NPs in alleviating IRI-AKI, we performed a transcriptomic study by RNA-seq. A total of 4987 genes (2287 upregulated and 2700 downregulated) were altered in IRI-AKI mice after treatment with 1 mg/kg NPs, and the NOD-like receptor (NLR) signaling pathway was determined to be enriched via Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis (Figure 4A). NLR thermal protein domain associated protein 3 (NLRP3), apoptosis-associated speck-like protein containing a CARD (ASC), and pro-cysteinyl aspartate specific proteinase-1 (pro-Caspase-1) constitute the NLRP3 inflammasome. Previous studies have shown that NLRP3 inflammasome activation contributes to renal dysfunction; conversely, inhibiting the activation of the NLRP3 inflammasome is beneficial for curbing contrast-induced AKI.

Our sequencing and q-PCR data showed that IRI induced a remarkable upregulation of NLRP3 levels (Figure 4B-C). The protein level was significantly higher in IRI-AKI mice than in healthy mice (P < 0.001), whereas this high protein level was visibly reduced after Se@BSA NP treatment (Figure 4D-E). Alternatively, HK-2 cells were subjected to hypoxia/reoxygenation (H/R) to mimic IRI-induced renal tubular injury in vitro. NLRP3 expression levels were increased in H/R cells (Figure 4F-G), and the addition of 50 μg/mL Se@BSA NPs almost eliminated NLRP3 accumulation in the cytoplasm after 6 h to an extent that was comparable to that achieved with the use of 10 μg/mL CY-09 inhibitor for suppressing NLRP3 inflammasome activation (Figure 4H). Additionally, the reduction in NLRP3 levels in H/R cells induced by Se@BSA NPs occurred in a dose-dependent manner (Figure 4F and Figure S9).

Assembly of the NLRP3 inflammasome enabled the proteolytic cleavage of pro-Caspase-1 into active Caspase-1, resulting in the maturation of the inflammatory factors IL-1β and IL-18 from the cytokine precursors pro-IL-1β and pro-IL-18, respectively. Guided by the sequencing results shown in Figure 4B, we determined the mRNA expression levels of IL-1β and IL-18 in the kidneys and discovered significant higher levels in IRI-AKI mice than in healthy mice (P < 0.001, Figure 5A). High levels of IL-1β, IL-18, and Caspase-1 (Figure 5B) were observed in the kidneys of IRI-AKI mice. However, after treatment with 50 μg/mL Se@BSA NPs, the levels of these proinflammatory factors were all reduced (Figure 5C-D). Similar findings were obtained in cell experiments in which levels of IL-1β, IL-18, and Caspase-1 expression in H/R cells were markedly decreased by Se@BSA NPs (P < 0.01, Figure 5E).

Modulation of GPx-1 expression by Se@BSA NPs

The NLRP3 inflammasome can be activated by ROS,, which are excessively generated in various tissues after IRI. Our flow cytometry data supported that the ROS levels were elevated in HK-2 cells after H/R treatment (Figure 6A). Nevertheless, the average fluorescence intensity of 2',7'-dichlorodihydrofluorescein diacetate (DCFH-DA), an effective probe for ROS, in H/R cells was decreased from 13662.4 ± 1046.9 to 8303.9 ± 406.7 after coincubation with 50 μg/mL Se@BSA NPs (Figure 6B). Of note, the ROS reduction identified with an increase of GPx-1 (Figure 6C), one of the most abundant GPx isoforms in eukaryocytes.

Previous studies have shown that GPx-1-deficient mice were susceptible to oxidative stress and had abnormalities in the myocardial vasculature after IRI. Otherwise, overexpression of GPx-1 could mitigate IRI-induced tissue damage. We found an overt reduction in GPx-1 levels in HK-2 cells following H/R treatment in the present study (Figure 6D-E). Remarkably, an upregulation of GPx-1 levels was detected after Se@BSA NP treatment, and the modulation of GPx-1 expression levels by this nanomaterial manifested in a dose-dependent manner (Figure S10). Similar results were also found in IRI-AKI mice, in which the GPx-1 levels in the kidneys were markedly increased after Se@BSA NP treatment (1 mg/kg, I.V., Figure 6F-G). To decipher the connection between GPx-1 and NLRP3, we suppressed GPx-1 expression in HK-2 cells by siRNA. Levels of NLRP3 expression were found to be increased in normal cells upon GPx-1 reduction (Figure 6H), indicating that GPx-1 inhibits NLRP3 production. Due to the induced expression of GPx-1, the level of NLRP3 was significantly lower in H/R cells exposed to NPs than in cells without treatment. Collectively, these data demonstrated that GPx-1 modulation contributed to the suppression of NLRP3 inflammasome activation by Se@BSA NPs.

Inhibition of renal fibrosis by Se@BSA NPs

Maladaptive repair after AKI predisposes patients to the development of chronic kidney disease, which is primarily characterized by renal fibrosis. To investigate the influence of Se@BSA NP treatment on the outcomes of AKI, we performed a pathological study on IRI-AKI mice after 14 days. As shown in Figure 7A, severe tubular injuries and an expanded interstitial area were observed in the kidneys of AKI mice. Intravenous administration of 1 mg/kg Se@BSA NPs obviously attenuated kidney injury, resulting in improved renal function (Figure 7B). Markedly decreased expression levels of fibrosis indicators, including fibronectin (Figure 7C), collagen I (Figure 7D), and α-Sma (Figure 7E), were also found in IRI-AKI mice after Se@BSA NP treatment, consistent with the conclusion drawn by the results of Western blotting (Figure 7F), thus suggesting an inhibitory effect of the nanomaterial on fibrosis formation after AKI.

Conclusions

Se is an essential trace element abundant in the kidney, and its levels decrease upon renal dysfunction. In this study, we fabricated a nanomaterial comprising Se0 and BSA using a simple method and applied it to treat IRI-induced AKI. The nanomaterial Se@BSA NPs upregulated GPx-1 levels and inhibited NLRP3 inflammasome activation in renal tubular epithelial cells stimulated with hypoxia/reoxygenation, resulting in reductions in the levels of active Caspase-1 and the proinflammatory factors IL-1β and IL-18. Se@BSA NPs maintained a high level in the kidneys after intravenous injection. Owing to modulation of the GPx-1/NLRP3/Caspase-1 pathway, Se@BSA NPs ameliorated the renal function of IRI-AKI mice in a dose-dependent manner and dramatically arrested the development of renal fibrosis after AKI. Considering the shortage of effective measures for AKI in the clinic, we believe that the biocompatible and easy-to-produce nanomaterial may be promising therapeutic candidates.

Materials

BSA (A1933), ascorbic acid (PHR1008), and sodium selenate (S0882) were obtained from Sigma Aldrich (Shanghai, CHN). FITC-labeled BSA was purchased from Xi'an ruixi Biological Technology (R-FB-005). Paraformaldehyde (P0099), sodium citrate (P0081), hematoxylin eosin (HE) staining kit (C0105S), hematoxylin staining solution (C0107), and sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) kit (P0012A) were purchased from Beyotime (Shanghai, CHN). Dialysis bags (8000-14,000 D) were purchased from Solarbio (YA1073, Beijing, CHN). Dulbecco's modified Eagle's medium (DMEM, 11995065) and fetal bovine serum (FBS, 10100147) were obtained from Gibco (Thermo Fisher Scientific, Shanghai, CHN). Cell Counting Kit-8 (CCK-8) was purchased from Dojindo (Shanghai, CHN).

Preparation of Se@BSA NPs

Forty milligrams of BSA dissolved in 10 mL sterile water was coincubated with 8 mL ascorbic acid (50 mM) at room temperature for 0.5 h. Sodium selenate (50 mM, 4 mL) was added, and the complex was incubated for 12 h with agitation at 1000 rpm. Se@BSA NPs collected by dialysis at room temperature for 24 h were freeze-dried for evaluation. FITC-labeled NPs were fabricated using the same method, in which BSA probed with FITC was employed.

Characterization of Se@BSA NPs

Se@BSA NPs were visualized by transmission electron microscopy (TEM, JEM-1400 PLUS, JEOL, Shanghai, CHN). The elemental mapping of the nanomaterial was investigated using field emission TEM (Talos F200S, FEI, Hillsboro, OR, US) coupled with EDS analysis. XPS was carried out with an ESCALAB 250Xi spectrometer (Thermo Fisher Scientific) equipped with an achromatic Al-Kα X-ray source. FT-IR (Nicolet iS5, Thermo Fisher Scientific) was performed to determine the infrared absorption spectrum of BSA in Se@BSA NPs. The particle size and ζ-potential of Se@BSA NPs were determined with a Nano-ZS instrument (Malvern, Worcestershire, UK) at room temperature.

Toxicological evaluation

The cytotoxicity of Se@BSA NPs was evaluated using HK-2 cells and erythrocytes. HK-2 cells obtained from the cell bank of the Chinese Academy of Sciences (CAS, Shanghai, CHN) were cultured with DMEM containing 10% FBS and seeded into a 96-well plate at a density of 5 × 103 cells per well. The survival of cells exposed to increasing concentrations of Se@BSA NPs (12.5, 25, 50, 100, and 200 μg/mL, based on the weight of NP) was detected by CCK-8 after 24 h. A hemolytic experiment was conducted as we recently described. Briefly, a total of 300 μL mouse erythrocytes diluted in 0.9% NaCl solution was incubated with 1.2 mL Se@BSA NPs at 37 °C for 2 h. The absorbance of the supernatant at 405 nm was detected using a microplate reader. These experiments were conducted in triplicate and repeated twice on different days.

The in vivo toxicity of Se@BSA NPs was evaluated by mouse experiments. Mice were cared for and treated in accordance with the NIH guidelines for the care and use of laboratory animals (NIH Publication no. 85e23 Rev. 1985). Twelve male eight-week-old C57 mice were randomly divided into two groups (n = 6). Se@BSA NPs (20 mg/kg) were administered by intravenous injection. Mouse blood obtained at day 7 after injection was analyzed on a Sysmex XT-2000i fully automatic hematology analyzer (Kobe, JPN). BUN and CRE, two renal function indicators, were measured using a urea assay kit (C013-2-1, Nanjing Jiancheng Bioengineering Institute, Jiangsu Province, CHN) and a creatinine assay kit (C011-2-1, Nanjing Jiancheng Bioengineering Institute), respectively. Meanwhile, the vital organs were obtained and sectioned for HE staining. An Olympus DX51 optical microscope (Tokyo, Japan) was employed to observe the pathological changes. All mouse experiments in this study were approved by the Animal Experimental Ethics Committee of TMMU (AMUWEC20211133).

Biodistribution analysis

Thirty male eight-week-old C57 mice were randomly divided into five groups (n = 6). The FITC-labeled NPs were intravenously administered at a dose of 1 mg/kg. The mice were sacrificed at 0, 3, 6, 12, and 24 h post injection to obtain vital organs, including the heart, liver, spleen, lungs, and kidneys. The distribution of Se@BSA NPs in these organs was visualized with an IVIS Spectrum Imaging System (PerkinElmer, Shanghai, CHN). ICP-MS (Agilent, Santa Clara, CA, USA) was applied to determine the Se content in the organs. The accumulation of FITC-labeled NPs in the kidney tubules at 24 h post-initial injection was analyzed by immunofluorescence.

Cell experiments

HK-2 cells were seeded into a 12-well plate with sterile glass slides at a density of 1 × 105 cells per well and cultured in DMEM containing 10% FBS. After adherence, the cells were exposed to 50 μg/mL FITC-labeled Se@BSA NPs at 37 °C for 6 h. The endocytosis of NPs was observed by a Zeiss LSM 780 NLO confocal microscope. To induce H/R injury, HK-2 cells were seeded into 6-well plates at a density of 2 × 105 cells per well and initially cultured in a regular incubator (5% CO2 and 95% air) for 12 h. The culture medium was then removed, and Hank's balanced salt solution (HBSS) was added. The cells were transferred to a hypoxic incubator (94% N2, 5% CO2 and 1% O2) and cultured for 24 h. After removal of HBSS, regular medium and Se@BSA NPs (12, 25, and 50 μg/mL) were subsequently added. Reoxygenation was performed by culturing the cells in a regular incubator for 6 h. The cells were then harvested and processed for biochemical analysis. GPx-1 expression in HK-2 cells was suppressed by a 21-nt siRNA (sense, AUUCAGAAUCUCUUCGUUCUU; antisense, GAACGAAGAGAUUCUGAAUUC) using the Lipofectamine 3000 transfection reagent (L3000-015, Invitrogen, Thermo Fisher Scientific).

IRI-AKI mouse experiment

Fifty-four male eight-week-old C57 mice were randomly divided into nine groups (n = 6). IRI-AKI was induced by clamping the renal pedicles for 35 min as previously described. Se@BSA NPs (0.1, 0.5, and 1 mg/kg) were given by intravenous injection after reperfusion. The mice in the sham group received operations in which the kidneys were exposed but not clamped, and they were treated with sterile PBS. After reperfusion for 24 h, the mice were sacrificed, and the blood and kidneys were obtained for analysis. Tubular injury scores were calculated according to the percentage of damaged tubules: 0, no damage; 1, < 25%; 2, 25 to 50%; 3, 50 to 75%, 4, > 75%. At day 14 after IRI-AKI, renal fibrosis was investigated by detecting fibronectin, collagen I and α-Sma levels. The kidney sections were analyzed by Masson staining using a Nanjing Jiancheng Bioengineering Institute kit (D026-1).

RNA-seq

Total RNA was extracted from the kidneys of IRI-AKI mice in the absence and presence of Se@BSA NP treatment (1 mg/kg, I.V.) using a TaKaRa RNAiso Plus reagent. Library construction and RNA sequencing were conducted by Tsingke Biotechnology (Beijing, CHN). Briefly, mRNA was purified by oligo(dT)-attached magnetic beads. Random hexamer-primed reverse transcription and second-strand cDNA synthesis were applied to obtain cDNA. The final library was amplified to make DNA nanoballs (DNBs), which were loaded into the patterned nanoarray. Sequencing was performed using the BGISEQ-500 platform, and the data were filtered with SOAPnuke (version 1.5.2). The expression level of the gene was calculated by StringTie (version 2.1.2). Differential expression analysis was performed using DESeq2 (version 1.4.5) with a Q value ≤ 0.05. KEGG analysis was performed by Phyper (https://en.wikipedia.org/wiki/Hypergeometric_distribution).

Immunofluorescence and immunohistochemistry staining

HK-2 cells and mouse kidney sections were fixed with 4% paraformaldehyde for 15 min and blocked with 1% BSA for 1 h. The antibodies used in immunofluorescence staining are shown in Table S1. A Zeiss LSM 780 NLO confocal microscope was applied to observe the cells and tissues. To perform the immunohistochemistry staining, the tissues were fixed in 4% paraformaldehyde, embedded in paraffin, and sectioned at 3 µm. The tissue sections were deparaffinized and incubated with 0.1 M sodium citrate (pH 6.0) at 95 °C for 30 min. The antibodies used in staining are shown in Table S2. A 3,3'-diaminobenzidine (DAB) substrate kit (ab64238, Abcam) was applied for visualization.

q-PCR

RNA from mouse kidneys and HK-2 cells was extracted with TaKaRa (Dalian, Liaoning, CHN) RNAiso Plus reagent and reverse transcribed using a PrimeScript RT-PCR kit (DRR014A, TaKaRa). The primer sequences are presented in Table S3. The data were processed with a Bio-Rad iQ5 standard-edition optical system (version 2.1). This assay was performed in duplicate and repeated three times on different days.

Western blotting

Cells and tissues were collected and processed for protein extraction. A total of 25 μg of each sample was resolved by 10% SDS-PAGE. Afterward, the proteins were transferred onto a 0.22 µm polyvinylidene difluoride membrane (PVDF, Millipore, USA). The antibodies used in immunoblotting are shown in Table S4. A BeyoECL Plus chemiluminescence kit (P0018S, Beyotime) was applied to observe the protein bands. Grayscale analysis was performed with ImageJ (version 1.8.0). The experiments were repeated three times on different days.

Statistical analysis

Statistical analysis was performed with GraphPad Prism 8 (GraphPad Software Inc, La Jolla, CA, USA) using the LSD multiple-comparison test and two-tailed paired t test. P < 0.05 was considered to be statistically significant.

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    Notch3 orchestrates epithelial and inflammatory responses to promote acute kidney injury. Kidney Int. 2018;94:126-38.

    Not in our library10.1016/j.kint.2018.01.031

  34. 34.

    Ischemic acute kidney injury induces a distant organ functional and genomic response distinguishable from bilateral nephrectomy. Am J Physiol Renal Physiol. 2007;293:F30-40.

    Not in our library10.1152/ajprenal.00023.2007

  35. 35.

    NALP3 forms an IL-1beta-processing inflammasome with increased activity in Muckle-Wells autoinflammatory disorder. Immunity. 2004;20:319-25.

    Not in our library10.1016/s1074-7613(04)00046-9

  36. 36.

    Pharmacological inhibition of the NLRP3 inflammasome reduces blood pressure, renal damage, and dysfunction in salt-sensitive hypertension. Cardiovasc Res. 2019;115:776-87.

    Not in our library10.1093/cvr/cvy252

  37. 37.

    Inhibiting NLRP3 inflammasome attenuates apoptosis in contrast-induced acute kidney injury through the upregulation of HIF1A and BNIP3-mediated mitophagy. Autophagy. 2021;17:2975-90.

    Not in our library10.1080/15548627.2020.1848971

  38. 38.

    Inhibition of endothelial PHD2 suppresses post-ischemic kidney inflammation through hypoxia-inducible factor-1. J Am Soc Nephrol. 2020;31:501-16.

    Not in our library10.1681/asn.2019050523

  39. 39.

    Identification of a selective and direct NLRP3 inhibitor to treat inflammatory disorders. J Exp Med. 2017;214:3219-38.

    Not in our library10.1084/jem.20171419

  40. 40.

    Mechanism and regulation of NLRP3 inflammasome activation. Trends Biochem Sci. 2016;41:1012-21.

    Not in our library10.1016/j.tibs.2016.09.002

  41. 41.

    Mitochondrial DNA oxidation induces imbalanced activity of NLRP3/NLRP6 inflammasomes by activation of caspase-8 and BRCC36 in dry eye. J Autoimmun. 2017;80:65-76.

    Not in our library10.1016/j.jaut.2017.02.006

  42. 42.
  43. 43.

    A simplified derivative of human defensin 5 with potent and efficient activity against multidrug-resistant Acinetobacter baumannii. Antimicrob Agents Chemother. 2018;62:e01504-17.

    Not in our library10.1128/aac.01504-17

  44. 44.

    Glutathione peroxidase-1 deficiency augments proinflammatory cytokine-induced redox signaling and human endothelial cell activation. J Biol Chem. 2011;286:35407-17.

    Not in our library10.1074/jbc.m110.205708

  45. 45.

    Heterozygous cellular glutathione peroxidase deficiency in the mouse: abnormalities in vascular and cardiac function and structure. Circulation. 2002;106:1154-8.

    Not in our library10.1161/01.cir.0000026820.87824.6a

  46. 46.

    Overexpression of human glutathione peroxidase protects transgenic mice against focal cerebral ischemia/reperfusion damage. Mol Brain Res. 1998;53:333-8.

    Not in our library10.1016/s0169-328x(97)00313-6

  47. 47.

    MicroRNA-34a promotes renal fibrosis by downregulation of klotho in tubular epithelial cells. Mol Ther. 2019;27:1051-65.

    Not in our library10.1016/j.ymthe.2019.02.009

  48. 48.

    mPEG-icariin nanoparticles for treating myocardial ischaemia. Artif Cells Nanomed Biotechnol. 2019;47:801-11.

    Not in our library10.1080/21691401.2018.1554579

  49. 49.

    Membrane nanoparticles derived from ACE2-rich cells block SARS-CoV-2 infection. ACS Nano. 2021;15:6340-51.

    Not in our library10.1021/acsnano.0c06836

  50. 50.

    αKlotho mitigates progression of AKI to CKD through activation of autophagy. J Am Soc Nephrol. 2016;27:2331-45.

    Not in our library10.1681/asn.2015060613

  51. 51.

    Autophagy is a renoprotective mechanism during in vitro hypoxia and in vivo ischemia-reperfusion injury. Am J Pathol. 2010;176:1181-92.

    Not in our library10.2353/ajpath.2010.090594

  52. 52.

    SOAP: short oligonucleotide alignment program. Bioinformatics. 2008;24:713-4.

    Not in our library10.1093/bioinformatics/btn025

  53. 53.

    StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat Biotechnol. 2015;33:290-5.

    Not in our library10.1038/nbt.3122

  54. 54.

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