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Mitophagy in Cancer: A Tale of Adaptation

Monica Vara-Perez, Blanca Felipe-Abrio, Patrizia Agostinis

Cells · 2019 · Review · CC BY

doi:10.3390/cells8050493

Abstract

In the past years, we have learnt that tumors co-evolve with their microenvironment, and that the active interaction between cancer cells and stromal cells plays a pivotal role in cancer initiation, progression and treatment response. Among the players involved, the pathways regulating mitochondrial functions have been shown to be crucial for both cancer and stromal cells. This is perhaps not surprising, considering that mitochondria in both cancerous and non-cancerous cells are decisive for vital metabolic and bioenergetic functions and to elicit cell death. The central part played by mitochondria also implies the existence of stringent mitochondrial quality control mechanisms, where a specialized autophagy pathway (mitophagy) ensures the selective removal of damaged or dysfunctional mitochondria. Although the molecular underpinnings of mitophagy regulation in mammalian cells remain incomplete, it is becoming clear that mitophagy pathways are intricately linked to the metabolic rewiring of cancer cells to support the high bioenergetic demand of the tumor. In this review, after a brief introduction of the main mitophagy regulators operating in mammalian cells, we discuss emerging cell autonomous roles of mitochondria quality control in cancer onset and progression. We also discuss the relevance of mitophagy in the cellular crosstalk with the tumor microenvironment and in anti-cancer therapy responses.

Full text

From PubMed Central, U.S. National Library of Medicine, as current on Oct 19, 2026. Paragraph numbers are ours, so an answer can point at one.

1. Introduction

Mitochondria are double-membrane organelles deputed at cell energy supply; defects in mitochondrial functions not only affect cell homeostasis, bioenergetics and redox control but also are decisive for cell death. In the particular case of cancer cells, mitochondrial-harbored metabolic pathways are rewired to meet the increased bioenergetics and biosynthetic needs of the cancer cells and to handle oxidative stress. Therefore, a tight control of the mitochondrial network homeostasis is essential for cancer cells.

Several highly interrelated mechanisms, including mitochondrial dynamics (fusion and fission) as well as macroautophagy (mitophagy), operate in mammalian cells as key mitochondrial quality control processes, and their implication in tumor development and progression has recently been elucidated. In particular, the selective removal of mitochondria through the process of mitophagy has been recently implicated in reshaping the metabolic landscape within cancer cells and the interaction between cancer cells and other key components of the tumor microenvironment (TME), to foster the adaptive and survival ability of cancer cells. Moreover, and considering the tight relationship between mitochondrial homeostasis and susceptibility to cell death, mitochondria quality control and mitophagy in primis are critical in anti-cancer therapeutic response as well as cancer-related off target effects.

In this review, after a brief introduction of the main mitophagy pathways, we discuss the interplay of mitophagy with the key pathways involved in tumorigenesis, its coordination of the TME and its implication in the success (or not) of current anti-cancer therapies.

2. Molecular Mechanisms Leading to Mitophagy

Macroautophagy (hereafter referred to as autophagy) is a self-degradation process which is typically stimulated under conditions of nutrient deprivation or cellular stress. During autophagy, proteins, macromolecules and/or organelles are engulfed in a double-membrane vesicle called autophagosome, which eventually fuses with the lysosome where cargo degradation takes place (for recent reviews on mechanisms of autophagy, see). The breakdown of intracellular material allows the recycling of essential building blocks to occur for metabolic and biosynthetic pathways. In mammalian cells, ubiquitylation operates as a prominent—albeit not unique—mechanism to selectively tag cytoplasmic cargoes destined for degradation by the autophagic machinery. Ubiquitylated targets are then recognized by specific autophagy receptors (such as p62/SQSTM1 and optineurin (OPTN); for a review on the topic, please see) which are capable of binding both ubiquitin and the lipidated members of the ATG8 family of pro-autophagic proteins (LC3A/LC3B/LC3C/GABARAP/GABARAPL1/GABARAPL2, reviewed in) via their LC3-interacting domain (LIR).

Mitophagy is a specialized form of autophagy in which damaged, dysfunctional or obsolete mitochondria are recognized by the autophagy machinery and eventually degraded by the lysosome. Damaged mitochondria are, in general, those mitochondria which are not able to execute oxidative phosphorylation (OXPHOS) efficiently. This is mainly because of the dissipation of their transmembrane potential and consequent accumulation of reactive oxygen species (ROS) causing an increase in the overall cellular oxidative stress levels, precipitating mitochondria-mediated cell death. Since mitochondria are not found as isolated organelles but as a highly dynamic network, the dysfunctional mitochondrion needs to be separated from the healthy network, requiring the tight coordination between fusion, fission and mitophagy machineries (see Box 1 for a summary of the fusion and fission mechanisms). In particular, depolarized mitochondria will be either not able to fuse with the healthy mitochondrial network or isolated from the network by fission, resulting in isolated mitochondria ready to be degraded by mitophagy (for extensive reviews on the topic, see). Instead, elongated mitochondria are spared from degradation and remain bioenergetically functional. Isolated and damaged mitochondria are then recognized by specific mitophagy receptors whose identity depends on the specific trigger causing mitochondrial clearance, and which function as molecular bridges for the interaction with the autophagy machinery.

Fusion is the union of two separate mitochondria into a single entity to guarantee at least one copy of mitochondrial DNA (mtDNA) per mitochondrion as well as efficient OXPHOS. Fusion is a highly coordinated process chiefly controlled by the mitofusins 1 and 2 (MFN1 and MFN2) anchored to the outer mitochondrial membrane (OMM) which, by forming homo- or heterodimers, coordinate fusion of the two OMMs, whereas Opa1 and cardiolipin (CL) orchestrate the fusion of the inner mitochondrial membranes (IMMs). MFN1 and MFN2 are required in both OMMs to assist membrane fusion in contrast to Opa1, whose presence in IMM is sufficient to enable the fusion. Opa1 interacts with MFN1 and disruption of this interaction results in mitochondrial fragmentation. Moreover, Opa1 cleavage by the mitochondrial metalloproteases OMA1 and YME1L results in one long isoform (L-Opa1) that remains anchored to the IMM and one short isoform (S-Opa1) that is released in the inter-membrane space (IMS). Although increased Opa1 cleavage is often associated with mitochondrial dysfunction, Opa1 proteolytic activation is required for mitochondrial fusion since L-Opa1 is essential for IMM tethering and S-Opa1 enhances the interaction of L-Opa1 and CL during IMM fusion.

In contrast, fission refers to the excision of one part of the mitochondrion from the main organelle. This separation can occur either symmetrically, where the two resulting mitochondria have similar respiratory capacity and membrane potential, or asymmetrically, where fission will result in one healthy mitochondrion and one damaged, the latter being targeted for degradation by mitophagy. Fission is coordinated by the dynamin-related protein 1 (DRP1). DRP1 is a cytosolic protein that will translocate to the OMM and induces mitochondrial excision by interacting with OMM-anchored receptors, including the mitochondrial dynamics proteins of 49 and 51 kDa (MiD51, MiD49). Once at the OMM, DRP1 self-assembles to form a constricting ring around the portion of the mitochondrion to be excised. The self-assembly of the different DRP1 isoforms into the constriction ring is assisted by other fission elements like Mff and CL. The role of FIS1 in mitochondrial fission is controversial, since it was initially described an OMM-anchored receptor assisting the mitochondrial localization of DRP1 but recent data showed that FIS1 can induce mitochondrial fragmentation by inhibiting the GTP-ase activity of the fusion machinery (MFN1, MFN2 and Opa1). Phosphorylation of different serine residues within DRP1’s GTP-ase domain will enhance (serine 616) or diminish (serine 637) its affinity for the OMM and its receptor molecules. The division site for the recruitment of DRP1 at the mitochondria is marked by the endoplasmic reticulum (ER). The ER wraps mitochondria and enables mitochondria constriction at the ER-mitochondria contact sites. A pivotal role is played by the ER-bound protein inverted formin 2 (INF2) which by controlling actin assembly induces constrictions, before DRP1 recruitment to the mitochondria (; for extensive reviews on this subject, see).

Below we provide an overview of some of the best characterized (canonical) or emerging mitophagy pathways described to date in mammalian cells.

2.1.1. PINK1/Parkin-Mediated Mitophagy

The PINK1/Parkin pathway is the most studied pathway of mitophagy (Figure 1). The serine/threonine PTEN-induced putative kinase 1 (PINK1) is the initiator of this pathway. Under normal conditions, PINK1 is imported to the IMM via the Translocase of the Outer Membrane (TOM) and Translocase of the Inner Membrane (TIM) complexes, where PINK1 is cleaved by the presenilin-associated rhomboid-like (PARL), a mitochondrial resident rhomboid serine protease, and subsequently degraded by the (mitochondrial) proteasome, keeping PINK1 levels low under basal conditions. The translocation of PINK1 towards the IMM is membrane-voltage-dependent; therefore, mitochondrial depolarization abolishes PINK1 translocation. Moreover, and in response to mitochondrial depolarization, PDK2 phosphorylates PARL, rendering it unable to cleave PINK1. Both events result in PINK1 accumulation at the OMM, where it recruits the U3 ubiquitin ligase Parkin. PINK1 phosphorylates serine 65 of Parkin’s ubiquitin-like domain, promoting the E3 ubiquitin ligase activity of Parkin. Once activated, Parkin will ubiquitinate key mitochondrial proteins (such as MFN1, MFN2, VDAC1 or Miro1), a process that contributes to the isolation of the damaged mitochondria. On the one hand, Parkin mediated ubiquitylation of MFN1 and MFN2 prevents them to engage in fusion. On the other hand, upon ubiquitylation Miro1, a protein that attaches mitochondria to the microtubules, will no longer bind the microtubules but the PINK1-Parkin complex, supporting the isolation the damaged mitochondrion. Furthermore, these ubiquitin chains are phosphorylated by PINK1, which triggers further cycles of Parkin recruitment and activation, leading to the amplification of the mitophagy signal. Finally, polyubiquitylation of mitochondrial proteins will be recognized by the autophagy cargo adaptors p62 and OPTN and interaction with LC3, forming a complex that is degraded by the autophagic machinery.

2.1.2. BNIP3/NIX-Mediated Mitophagy

BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (BNIP3) and BNIP3-like (BNIP3L/NIX) are LIR-containing proteins located at the OMM which are able to directly bind LC3/GABARAP and trigger mitophagy without requiring protein ubiquitination or additional adaptors (Figure 1). They belong to the BH3-only group of the BCL-2 family of proteins, although their ability to bind BCL-2 remains context dependent. Both BNIP3 and NIX are under the transcriptional regulation of Hypoxia-Inducible Factor 1 alpha (HIF1α), and are therefore thought to mediate hypoxia-triggered mitophagy. However, in particular conditions, BNIP3 and NIX are also under the transcriptional regulation of FOXOa3 or NF-kB, suggesting their participation in signaling pathways beyond hypoxia. Regarding their interactors, BNIP3 and NIX have been shown to form homodimers and heterodimers, as well as to separately interact with Mieap (a p53-regulated mitochondrial protein associated with the removal of oxidized species) and cadherin6 (CDH6, protein modulator of mitophagy and DRP1-mediated fission) to guarantee mitochondrial homeostasis. Moreover, Opa1 has been shown to interact with BNIP3 to promote mitochondrial fragmentation and phosphorylation of BNIP3 in its C-terminal domain disrupts Opa1-BNIP3 interaction promoting mitophagy and reducing cell death. Phosphorylation of BNIP3 and NIX within their LIR domain (serines 17 and 24 for BNIP3 and serines 34 and 35 for NIX) increases their affinity for LC3 binding, suggesting that phosphorylation is the main molecular switch controlling their pro-mitophagy or pro-death activity.

2.1.3. FUNDC1-Mediated Mitophagy

FUN14 Domain Containing 1 (FUNDC1) is another OMM protein capable to bind directly LC3 and trigger mitophagy (Figure 1). Alike BNIP3 and NIX, also FUNDC1 can trigger hypoxia-induced mitophagy—even though it is not a HIF1α target—and its phosphorylation in the LIR domain (serine 17) can increase its affinity for LC3. Interestingly, FUNDC1 can interact with both Opa1 and DRP1 and this interaction is modulated by FUNDC1 phosphorylation on serine 13. Dephosphorylation of FUNDC1 by phosphoglycerate mutase 5 (PGAM5), a mitochondrial serine/threonine protein phosphatase activated by PARL cleavage under condition of loss of mitochondria membrane potential, reduces Opa1-pFUNDC1 complex, which in turn increases FUNDC1′s affinity for DRP1 and promotes mitochondrial fragmentation and mitophagy. Alternatively, the E3 ubiquitin ligase MARCH5 ubiquitylates FUNDC1 and DRP1 to fine-tune the mitophagic upregulation in response to hypoxia.

2.2.1. Lipid-Mediated Mitophagy

CL is a phospholipid which is particularly enriched in the IMM, which is able to directly interact with GABARAP upon translocation from the IMM to the OMM in response to loss of mitochondrial transmembrane potential mediated by the hexameric intermembrane space protein NDPK-D. Prohibitin 2 (PHB2) is an IMM mitophagy receptor which can bind LC3 upon membrane depolarization and proteasomal rupture favoring Parkin-mediated mitophagy. Mechanisms of mitophagy induced by PHB2 have been associated with CL redistribution within the mitochondrial membranes, although PHB2′s contribution to CL-mediated mitophagy has not yet been elucidated. Additionally, ceramides -sphingolipids present in the OMM- can bind LC3B-II to target the mitochondria for degradation upon DRP1-mediated mitochondrial fragmentation. Notably, ceramide 18 (Cer18) binding to LC3B-II inhibits mitochondrial function and oxygen consumption, induces autophagic cell death in vitro and suppress tumor growth in vivo, suggesting that lipid binding to LC3 may regulate the functional outcome of mitophagy.

2.2.2. AMBRA1-Mediated Mitophagy

Another mitophagy receptor is Autophagy And Beclin 1 Regulator 1 (AMBRA1), a Parkin interactor that directly binds LC3 and triggers mitophagy to protect the cells from apoptotic cell death caused by oxidative stress. Mechanistically, IKKα phosphorylates AMBRA1 at serine 1014, enhancing its affinity for the ATG8 members GABARAP/GABARAPL1/GABARAPL2 and IKKα inhibition impairs AMBRA1-mediated mitophagy. Furthermore, after membrane depolarization AMBRA1 promotes the mitochondrial localization of the E3 ligase HUWE1, which by ubiquitylating MFN2 promotes mitophagy. Of note, HUWE1 absence also abolishes AMBRA1-mediated mitophagy, suggesting that HUWE1 could also modulate AMBRA1 serine 1014 phosphorylation, although the precise mechanism has not yet been elucidated. Overexpression of AMBRA1ActA (a fusion protein specifically expressed at the mitochondria) exacerbates mitophagy and suppresses oxidative stress and apoptosis induced by mitochondrial poisons, indicating the cytoprotective role of this pro-mitophagic protein.

2.2.3. BCL2L13-Mediated Mitophagy

The mammalian ortholog of the only mitophagy receptor in yeast (atg32) is BCL2L13/BCL-RAMBO, an OMM protein able to bind LC3 and able to induce DRP1-independent mitochondrial fragmentation. Not only BCL2L13 induces Parkin-independent mitophagy and has been associated with NIX/FUNDC1-mediated mitophagy, but it is also involved in autophagy-independent mitochondrial quality control.

2.2.4. FKBP8-Mediated Mitophagy

The recently described mitophagy receptor FK506-binding protein 8 (FKBP8/FKBP38), a known inhibitor of the mammalian target of rapamycin (mTOR), is a protein anchored to the OMM which is able to bind lipidated LC3A/GABARAP; its overexpression promotes mitochondrial fission in a similar fashion as BNIP3 or NIX overexpression. However, FKBP38 operates as a preferential LC3A recruiter, suggesting that depending on the expression of LC3 members, a different panel of mitophagy receptors is engaged during mitophagy. Strikingly, FKBP8 is not degraded in the autophagosome during mitophagy, but once the mitochondria have been targeted for degradation, FKBP8 escapes from degradation by relocating to the ER, where it exerts an antiapoptotic effect due to its ability to bind Bcl2.

2.2.5. Rab-Mediated Mitophagy

Endosomal trafficking and recycling governed by the Rab family of small GTPases contributes to the mitophagic removal of mitochondria. Recent studies have highlighted mechanisms for the removal of mitochondria that are dependent on the activity of several Rab-GTPases. A recently described pathway, independent of the classical ATG5/ATG7-LC3A/B/C autophagosome axis but regulated by the Beclin1 and ULK1 complex, involves a Rab9-mediated vesicular mechanism where autophagosomes are generated by the fusion of isolation membrane with vesicles derived from the trans-Golgi and late endosomes. Recent work shows that another regulator of Rab activity, RABGEF1, a guanine nucleotide exchange factor (GEF) of endosomal proteins, is recruited in a Parkin-mediated fashion to damaged mitochondria. Mitochondria associated RABGEF1 enables the targeting of Rab5 and Rab7a to the damaged mitochondria and promotes ATG9-mediated vesicle assembly and the subsequent autophagosomal encapsulation.

Mitochondria can also be sequestered into Rab5-decorated endosomes through the endosomal sorting complex (ESCRT) and delivered to the lysosomes for degradation. For this pathway, Parkin-mediated ubiquitylation of mitochondria is necessary while the canonical autophagy machinery is dispensable. The reason why mitochondria would be cleared preferentially by the endocytic pathway instead of using the autophagy machinery is not completely clear, even if it is apparent that redundant pathways of mitochondria degradation exist in mammalian cells. A possibility is that endosomes act as a first line of defense, before autophagy is stimulated, to rapidly remove potentially damaging dysfunctional mitochondria.

3. Mitophagy and Cancer

Most of the above described proteins involved in the mitophagic processes have been shown to be dysregulated in cancer patients (Table 1), but whether they behave as tumor promoter or tumor suppressor seems to be highly dependent on the cancer subtype and context. For example, the pro-mitophagic receptor BNIP3 has tumor suppressor functions in breast cancer (Table 1), whereas it is thought to have a tumor promoter role in melanoma, renal cell carcinoma and pancreatic cancer (Table 1). To discuss how mitophagy contributes to tumor progression, we will first review the interplay between mitophagy with the key pathways involved in tumorigenesis in terms of metabolic modulation. Later, we will discuss their impact on the modulation of the TME.

3.1. Mitophagy Modulators and Cancer Metabolism

Metabolic reprogramming is one of the hallmarks of cancer. Cancer cells need to plastically rewire their metabolism to fulfill the three basic needs of dividing cells: rapid ATP generation to maintain energy status, metabolic precursor supply to meet the high rates of macromolecule biosynthesis and maintenance of an appropriate cellular redox status. To do so, cancer cells have acquired the ability to use a variety of fuel sources to adapt their metabolism according to their needs and to cope with metabolic and nutrient stresses. Growing evidence indicates that autophagy supports the metabolic plasticity of cancer cells, by providing virtually all essential components of carbon metabolism through the degradation of carbohydrates, proteins, lipids and nucleotides (recently reviewed in). Several genetic studies support the current view that both glucose-dependent metabolic pathways and mitochondria metabolism are pivotal in tumorigenesis.

In the following subsections, we will discuss emerging links connecting oncogene-driven metabolic pathways and key modulators of the mitophagic machinery.

3.1.1. Mitophagy and Its Contribution to the Warburg Effect

A main metabolic phenotype observed in cancer cells is driven by the Warburg effect, which consists in the shift from ATP generation through OXPHOS to ATP generation through glycolysis, even in the presence of oxygen, being the transcription factor HIF-1α one of its major drivers. Stabilization of HIF-1α subunit under hypoxia activates the expression of the glycolytic program by encoding glucose transporters and glycolytic enzymes, as well as by promoting the conversion of pyruvate into lactate instead of its incorporation in the tricarboxylic acid (TCA) cycle. Notably, HIF-1α transcriptional program also comprises the pro-mitophagic receptors BNIP3 and NIX, which, by instigating mitophagy, would diminish the mitochondrial mass thereby reducing the overall oxygen consumption of the cell and promoting its survival under low oxygen conditions (Figure 2a). Cancer cells have also developed O2-independent mechanisms to stabilize HIF-1α under normoxia and drive tumorigenesis, highlighting the essential pro-glycolytic role of this transcription factor. Moreover, changes in the expression levels of the mitophagy receptors BNIP3 and NIX can feedback on HIF-1α stability. For instance, loss of BNIP3 in a mouse model of mammary tumorigenesis reduces mitophagy and increases mitochondrial ROS levels, which results into increased normoxic HIF-1α stabilization, eventually promoting the Warburg effect and subsequently tumor progression (Figure 2b). A similar effect has also been observed in the human breast cancer cell line MCF-7 in vitro, where insulin-like growth factor 1 (IGF-1) induces BNIP3 expression in a HIF-1α dependent-manner. However, MCF-7 cells with acquired resistance to an IGF-1 receptor kinase inhibitor show reduced BNIP3 levels, impaired mitophagy, accumulation of dysfunctional mitochondria and increased ROS production, leading to increased ATP production through glycolysis. Likewise, in glioblastoma cells, loss of PINK1 promotes the Warburg effect by the ROS-dependent stabilization of HIF-1α and reduced pyruvate kinase muscle isozyme 2 (PKM2) activity, both key regulators of aerobic glycolysis.

Glycolysis is also modulated by the interplay between the tumor suppressor p53 and mitophagy. A p53-BNIP3 axis modulates the glycolytic flux in radioresistant head and neck squamous cell carcinoma cell lines. In these radioresistant cancer cells, BNIP3-dependent clearance of abnormal mitochondria reduces the glycolytic shift while maintaining oxygen consumption only in the presence of p53 (Figure 2c). Although the molecular mechanism linking p53 to BNIP3 is still unclear, BNIP3 is the dominant mitophagy receptor since loss of Parkin, is ineffective. This is interesting, since Parkin is a p53-regulated gene mediating the effects of p53 on mitochondria energy metabolism, antioxidant defense and irradiation-induced tumorigenesis. Hence, while these studies suggest that mitophagy contributes to p53-mediated effects on cancer metabolism and tumorigenesis they also highlight that, depending on specific cancer context, the nature of the mitophagy receptor involved could be critical. Additionally, other mitophagy-unrelated functions of BNIP3 and Parkin could play a role, depending on the cancer and type of stress considered.

High glycolytic rates in cancer cells are controlled by other key oncogenes, such as c-Myc and K-RAS. Besides coordinating with HIF-1α the expression of several glucose transporters and glycolytic enzymes, c-Myc also modulates mitophagy by regulating choline metabolism. In B-lymphoma cells, c-Myc activates the transcription of the key enzyme phosphate cytidylyltransferase 1 choline-α (PCYT1A) and PCYT1A upregulation prevents lymphoma cells to undergo a mitophagy-dependent necroptosis.

3.1.2. Mitophagy and OXPHOS

As mentioned, while cancer cells engage in aerobic glycolysis, and some tumors rely mostly on this pathway to meet their bioenergetic demands, they also strive to maintain pools of respiring mitochondria to adjust their metabolic and biosynthetic requirements. This cancer cell autonomous plasticity requires that pathways controlling mitochondria clearance and biogenesis are intricately linked. Clear examples are the key regulator of mitochondrial biogenesis, peroxisome proliferator-activated receptor gamma coactivator-1 alpha (PGC-1α) and c-Myc. The transcriptional coactivator PGC-1α is downregulated by HIF-1α to support the glycolytic switch in low oxygen condition (reviewed in). Oncogenic c-Myc coordinates a vast array of genes involved in cell cycle control and glycolysis, but it is also a key promoter of mitochondrial biogenesis and overall mitochondria metabolism. Mitochondrial biogenesis strengthens c-Myc’s effects on cell-cycle progression and glycolytic metabolism, enabling cancer cells with the metabolic flexibility that supports growth (Figure 2d). Another important pathway involved in the clearance of damaged mitochondria is the MAPK pathway, which stabilizes PINK1 and subsequently promotes mitophagy in response to ROS-induced stress.

Inefficient OXPHOS caused by a leaky or defective electron transport chain can lead to ROS production. Interestingly, high OXPHOS activity induced by feeding HeLa cells with glutamine is also coupled to enhanced mitophagy, through a mechanism involving the translocation of the small GTPase Ras homolog enriched in brain protein (Rheb) to the mitochondria and its binding to NIX. Although Rheb can interact with both BNIP3 and NIX, resulting in the blockade of Rheb-mediated activation of mTORC1, mitophagy coupled to increased OXPHOS is both mTORC1- and BNIP3-independent. Thus, although mainly operating in concert, BNIP3 and NIX may affect mitochondrial degradation through independent mechanisms or in a cancer-subtype specific fashion. In line with this, silencing of BNIP3 in melanoma cells blunts glutamine-mediated effects on melanoma cell growth, migration and bioenergetics, suggesting that BNIP3 is vital to maintain mitochondria fitness required for glutamine-driven melanoma aggressiveness.

Hence, mitophagy may prevent the accumulation of damage that is inherently associated with elevated mitochondrial metabolism, thereby maintaining the (re)generation of mitochondria that are metabolically adapted to cope with the metabolic and nutrient stress from the TME. An interesting conjecture proposes that the coordinated induction of mitochondria biogenesis and mitophagy may be used to generate pools of mitochondria that are better suited to catabolize fatty acids through fatty acid oxidation (FAO). Given that RAS-driven tumors require elevated autophagy to preserve mitochondrial function and proficient FAO ( and reviewed in), this conjecture seems indeed plausible (Figure 2d). This is particularly important, considering that FAO is emerging as crucial fuel for aggressive cancer types, like breast cancer cells, and that acetyl-CoA from oxidized fatty acids is a key regulator of epigenetic remodeling of chromatin, which may further support metabolic rewiring in cancer cells. In this scenario, PGC1α could be a key player, as specifically regulates FAO. Actually, upregulation of PGC1α in nasopharyngeal carcinoma provides resistance to radiation by promoting FAO. In addition, PGC1α regulates mitophagy during myogenesis by buffering ROS production, which can cause mitophagy at high levels. Considering this, it could be possible that PGC1α contributes to the aggressiveness of tumors by connecting lipid metabolism, mitophagy and mitochondrial homeostasis.

The role of mitophagy, as for autophagy more in general, might be also modulated during the various phases of tumorigenesis. Notably, AMBRA1 may also influence cancer metabolism and tumor progression by regulating the degradation of c-Myc. Mechanistically, AMBRA1 favors the interaction between c-Myc and its phosphatase PP2A, which leads to the dephosphorylation and degradation of c-Myc. This interaction is enhanced when mTOR is inhibited, reducing the cell division rate. In addition, HUWE1, the E3 ubiquitin ligase involved in AMBRA1-mediated mitophagy, also participates in c-Myc degradation, suppressing RAS-driven tumorigenesis by preventing c-Myc/Miz1 accumulation. AMBRA1 mutant mice develop spontaneous tumors, suggesting a tumor suppressor role for AMBRA1. However, considering that besides regulating c-Myc degradation and mitophagy, AMBRA1 plays additional functions in cancer cells, it remains challenging to pinpoint the exact contribution of AMBRA1-mediated mitophagy in tumorigenesis. In contrast, previous studies have shown that autophagy favors RAS-mediated transformation by supporting glycolysis and mitochondria metabolism. Additionally, loss of autophagy in K-RAS or in mutant B-RAF-driven lung cancer models impairs tumor growth and switches tumor fate from carcinomas to benign tumors, called oncocytomas. Interestingly, in both cases this inhibition of tumorigenesis is associated with the accumulation of defective mitochondria, suggesting mitophagy impairment.

Transformation mediated by c-Myc or RAS-v12 overexpression increases AMP-activated protein kinase (AMPK) phosphorylation, favoring the activation of FoxO3, which upregulates the expression of genes such as BNIP3 and LC3. In addition, Hepatitis B virus X protein (HBx), a leading factor in Hepatitis B virus-related hepatocellular carcinoma, promotes PINK1-Parkin mediated mitophagy through the activation of the mitochondrial peptidase LON under starvation, which could be a determinant event in the development of hepatocellular carcinoma.

Altogether, these studies reveal that mitophagy either directly or indirectly impacts the metabolism of cancer cell, but if tumor progression is favored by mitophagy or not, will depend on the mitophagy pathway involved, type of tumor and possibly on the stage of tumor development.

Finally, it should be considered that beyond the role of mitophagy in cancer cells, stromal cells’ autophagy and perhaps mitophagy (as discussed further below) are emerging as key contributors to tumor progression, by providing essential amino acid fueling metabolism in cancer cells.

3.1.3. Mitophagy and Iron Metabolism

Iron homeostasis is essential for numerous cellular processes, and either too much or too little iron can be detrimental for cell survival. Iron is fundamental for cell growth, but excessive iron accumulation induces the production of ROS and oxidative injury. Iron trafficking is regulated at both the systemic and organellar level, being mitochondrial functions crucial in maintaining cellular iron homeostasis. Iron is transported to the mitochondrion for the biosynthesis of heme and iron-sulfur clusters through mitochondrial iron importers such as SLC25A37/mitoferrin-1 and SLC25A28/mitoferrin-2. Dysfunction of mitochondrial iron trafficking plays an important role in mitochondrial diseases as well as cancer. Recently, it has been described that PINK1 and Parkin regulate mitochondrial iron accumulation in pancreatic cancer. Depletion of PINK1 and Parkin in mice accelerates K-RAS-driven pancreatic tumorigenesis due to mitochondrial iron accumulation. Since PINK1 and Parkin mediate autophagic degradation of SLC25A37 and SLC25A28, PINK1- or Parkin--deficient mice show increased SLC25A37 and SLC25A28 levels, leading to mitochondrial iron accumulation, activation of the HIF1α glycolytic program, ultimately promoting the Warburg effect. This effect was rescued by genetic depletion of HIF1α or by deferiprone treatment, a mitochondrial iron chelator. Notably, K-RAS-driven pancreatic tumorigenesis was also inhibited, suggesting that HIF-1α metabolic reprogramming induced by mitochondrial iron accumulation contributed to pancreatic tumorigenesis in Pink1- or Park2-deficient mice. Furthermore, in a STAT3 deficient model of colorectal cancer, elevated mitophagy in intestinal epithelial cells (IECs) caused an accumulation of iron (II) in lysosomes, provoking lysosomal membrane permeabilization. This enabled antigen processing and stimulation of dendritic cells-mediated CD8+ T cells-induced anti-tumor immunity.

Hence, these studies support the view that mitophagy or mitophagy players take part in the control of iron trafficking at organellar level in cancer cells and stromal cells, affecting tumor progression at different molecular and cellular levels; from metabolic reprogramming to anti-tumor immunity regulation. Considering the emerging role played by mitochondria during iron-dependent ferroptosis—a regulated form of necrosis to which drug-resistant cancer cells are particularly vulnerable—it is tempting to assume that mitophagic-control of iron metabolism in cancer cells may become a druggable target in cancer therapy.

3.2. Mitophagy and Cancer Stem Cells

Tumors are complex cellular systems where different subpopulations of cells coexist. Cancer stem cells (CSCs) constitute one of these subpopulations, which is characterized by their ability of self-renewal, dedifferentiation, generating the bulk tumor cells, and metastatic potential. CSCs are not a fixed entity and phenomena of dedifferentiation of mature tumor cells to CSCs can occur. Therefore, the interaction of CSCs and tumor cells with the TME is important to decide cancer cell fate. Mitophagy also plays a role in the regulation of CSC subpopulation, since it is not only involved in the promotion of the stemness, but also in the acquisition of chemoresistance. Mitophagy regulates hepatic CSC subpopulation by suppressing p53 activity. Increased Parkin-mediated mitophagy has been shown to promote p53 co-localization with mitochondria, resulting into simultaneous p53 and mitochondria degradation in a mitophagy-dependent manner. Mitophagy inhibition leads to PINK-mediated p53 phosphorylation at serine 392, provoking p53 translocation into the nucleus and binding to the NANOG promoter, which prevents the activation of NANOG expression by the OCT4 and SOX2 transcription factors. Since NANOG is an essential transcription factor for maintaining the stemness of CSCs, this mechanism would reduce the hepatic CSC subpopulation. Exacerbated mitophagy also promotes stemness in esophageal squamous cell carcinoma cells, as Parkin-dependent mitophagy was found to increase the expression of the stem cell marker CD44 in cancer cells undergoing epithelial–mesenchymal transition (EMT). Metabolic regulation is also a key determinant of the stem phenotype in cancer cells and mitophagy could play an important role in this context too. In line with this, in lung cancer and nasopharyngeal carcinoma, CSCs exhibit reduced mitochondrial mass compared to non-CSCs.

Hence, it seems that the role of mitophagy in CSCs may largely depend on the affected regulators and signaling pathways that control the differentiation of mature tumor cells to CSCs or the maintenance of stemness.

3.3. Non-Autonomous Effects of Mitophagy: Mitochondrial Transfer

Although mitophagy is crucial to preserve cell homeostasis, under certain conditions, either healthy or damaged mitochondria can be exchanged between cells to improve the OXPHOS capacity of the receiving cells or be degraded by the mitophagy machinery of the receiving cell, in a process called transmitophagy. For instance, cancer associated fibroblasts (CAFs) in contact with breast cancer cells have been shown to have a radically different mitochondrial network than that of non-cancerous fibroblasts, suggesting that a mitochondrial exchange is orchestrated by the cancer cells. In this scenario, CAFs are the highly-mitophagic donor cells and the cancer cells the recipients wanting to maintain their high OXPHOS status. In another cancer model, B16 murine melanoma cells depleted from mitochondria (ρ0) and injected in syngeneic mice have been shown to incorporate mitochondria from the host to maintain their “OXPHOS addiction” as well as tumor growth. Similarly, mitochondrial transfer between cells within astrocytomas promotes tumor growth. Additionally, leukemic cells have been shown to accept intact mitochondria from stromal cells to increase their OXPHOS capacity and resist the loss of membrane potential induced by different chemotherapeutic treatments. In fact, there is a general consensus that stromal cells, mainly mesenchymal stem cells (MSCs) or fibroblasts, are the source of healthy mitochondria for cancer cells, although endothelial cells or macrophages have also been reported as stromal cells involved in the mitochondrial exchange.

Although several studies suggest that mitochondrial transfer is an active process, the mechanistic underpinnings of this process remain highly controversial. Mitochondrial transfer could require direct cell-cell contact between the donor and acceptor cell, mainly in the form of nanotubes. Nanotubes are F-actin based membrane tubes that can transport mitochondria, among other intercellular structures, to relieve mitochondrial stress in the acceptor cell which have been observed within tumoral structures. Most of the mitochondrial transfers using nanotubules in a cancer context mainly refer to either MSCs as donor cells and a cancer cell as acceptor or cancer cell donor to cancer cell acceptor. On the other hand, other studies suggest that contact between donor and acceptor is not necessary, as (fragments of) mitochondria could be trafficked and released via extracellular vesicles. For example, pro-inflammatory myeloid-derived regulatory cells secrete extracellular vesicles containing depolarized mitochondria, which can be incorporated by T-cells. T-cells and prostate cancer cells-derived extracellular vesicles have also been shown to contain mitochondrial fragments marked by the presence of various mitophagy regulators (e.g., PINK1, MFN1, MFN2…) and mtDNA. It has also been claimed that the functionality of the mitochondria is irrelevant for their transfer, while intact mtDNA is indispensable for mitochondria to be transferred to another cell. Furthermore, mtDNA transfer alone (not the complete mitochondrion) from the host to ρ0 cancer cells was shown to be sufficient to recover the respiratory capacity of mitochondria-deficient cancer cells; however, the transfer mechanisms remain elusive. Interestingly, few reports suggest that extracellular vesicles could also travel within nanotubes and thus, these two mechanisms are perhaps not mutually exclusive). What is clear is that both mechanisms are highly dependent on cytoskeletal dynamics and in line with this, cytoskeletal disruption by vincristine or cytochalasin D treatment hampers mitochondrial transfer. In this regard, Miro1 overexpression in MSCs favor the donation of healthy mitochondria to relief cellular stress in the acceptor cell

Together, these studies highlight that intercellular mitochondrial transfer is an emerging mechanism of mitochondrial quality control as well as a crucial mechanism of interaction between cancer and stromal cells. However, the mechanistic underpinnings of this process are still largely elusive and more studies are needed to fully appreciate how and when mitochondrial transfer between cancer cells and their stroma contributes to cancer progression.

3.4. Mitophagy, Innate Immunity and Inflammation

Mitochondria are emerging as key modulators of cellular danger signaling and systemic immunity responses aiming to restore cellular or tissue homeostasis. This is perhaps not surprising since mitochondria are ancestral remnants of a-proteobacteria (endosymbiotic theory) and, as such, the mitochondrial genome (mtDNA) harbors CpG DNA repeats and encodes for formylated peptides (for a recent review on the topic, see. Upon cellular injury or death, various mitochondrial factors or products (including but not limited to mtDNA, CL, ROS, ATP, cytochrome c or N-formyl-peptides) are released in the extracellular environment and circulation and operate as damage-associated molecular pattern (DAMPs), which activate immune responses by binding to pattern recognition receptors (PRRs) of innate immune cells. Intracellularly and upon mitochondrial damage, mtDNA and ROS released in the cytosol can engage either the NLRP3 inflammasome or AIM2 inflammasome, which will mediate the proteolytic maturation and secretion of potent pro-inflammatory cytokines (such as IL-1β and IL-18) through the activation of caspase-1, thus eliciting pro-inflammatory responses. Cytosolic mtDNA can also be sensed by cGAS, which upon stimulation will engage the ER-resident protein STING into activating the Type-I interferon transcriptional program.

Dysfunctional mitochondria not only provide potent DAMPs, but also sense and decode danger signals by operating as a signaling platform for the recruitment and modulation of the molecular machinery detecting incoming cellular damage. Typically, during viral infection, mitochondria stimulate antiviral signaling through the recruitment of RIG-I and MDA5, two members of the NOD-like receptor family of PRRs, via the mitochondria-associated adaptor protein MAVS (for an extensive review on this subject, please see. Interestingly, MAVS interacts with essential mediators of mitochondrial dynamics (MFN1 and TBC1D15) and this interaction would modulate STING and NLPR3 inflammasome signaling as well. Moreover, NLRP3 and STING are particularly enriched at the ER-mitochondria contact sites (MAMs;), ER microdomains that have also been shown to be critical for PINK1/Parkin-mediated mitophagy initiation. These observations together suggest that mitophagy is intimately linked to mitochondrial sensing and decoding of intracellular danger signaling. In fact, in PINK1- or Parkin-deficient mice the increased oxidative stress caused by mitochondrial iron accumulation in pancreatic cells resulted in AIM2 inflammasome activation, ultimately leading to the release of HMGB1, a non-histone nuclear protein that once released in the extracellular environment upon cell death operates as a DAMP. In this particular case, HMGB1 was released in its oxidized form, which can bind the AGER receptor on innate immune cells and trigger PD-L1 expression, hereby exerting an immunosuppressive role. The concept of PINK1/Parkin- mediated mitophagy as an inflammasome dampener is supported by recent compelling evidence regarding the cargo receptor p62. Upon activation of NF-κB signaling by the NLRP3 inflammasome, parallel mitochondrial damage is induced to trigger Parkin/p62-mediated mitophagy in order to prevent excessive IL-1β-dependent inflammation. The activation of the NLPR3 inflammasome signaling is critically dependent on the SESN2-mediated recruitment of p62 to the ubiquitylated mitochondrial membrane.

Thus, mitophagy operates as a self-limiting system to protect cells from exacerbated inflammation by removing bona fide activators of the NLRP3 inflammasome (ROS, iron and mtDNA). Given the pleiotropic effects in inflammation, immunosurveillance and therapy responses of IL-1β and IL-18, the activation of the inflammasome in cancer may have contextual pro-tumorigenic or anti-tumorigenic roles (for a review on the topic, see).

On the other side, mitophagy has also been shown to modulate the adaptive immune response in terms of dendritic cell-T cell synapse, activation of both CD8+ T cell and memory NK cells, suggesting that additional fine-tuning of the immune responses by mitophagy may occur through mechanisms that do not involve the inflammasome. However, more studies are required to fully appreciate the role of mitophagy in cancer inflammation and anti-tumor immunity.

4. Mitophagy and Anti-Cancer Therapies

Historically, mitophagy has been considered a protective mechanism used by the cancer cells against the onset of mitochondrial apoptosis, the main cell death pathway driven by the metabolic stress of the TME in cancer cells. Considering that several classes of anti-cancer drugs or treatments either directly or indirectly cause mitochondrial dysfunction, ROS production and cytochrome c release launching caspase activation, targeting these dysfunctional mitochondria by mitophagy could hamper the initiation of the apoptotic cascade. Therefore, the induction of mitophagy by anti-cancer therapies may modulate their cytotoxic ability and contribute to therapy resistance.

This assumption is supported by several examples where the genetic inhibition of mitophagy pathways sensitize cancer cells towards cell death induced by anticancer treatments. In fact, autophagy (and mitophagy by extension) is highly sensitive to microtubule-dynamics modulators since microtubules are essential for the autophagosome fusion with the lysosome. In particular, downregulation of PINK1/Parkin- or Rab9a-mediated mitophagy contributes to radiosensitizing cancer cells, and genetic downregulation of key mitophagy receptors such as PINK1, FUNDC1 or AMBRA1 also chemosensitizes cancer cells, supporting the pro-survival role of mitophagy in cancer cells in response to chemo/radiotherapy.

Considering this pro-survival role of mitophagy after anti-cancer treatment, it could be expected that therapy-resistant cells would display higher mitophagy levels. Indeed, enhanced mitophagy contributes to cisplatin and etoposide resistance in cancer cells and mitophagy impairment resensitizes drug-resistant cancer cells.

However, different mitophagic pathways may be engaged to counteract therapy-induced mitochondrial damage and contribute to the therapy resistance of cancer cells. For example, in docetaxel-treated prostate cancer cells, trehalose induces ULK1-independent mitophagy and reduces their sensitivity to their treatment. Moreover, Opa-interacting protein 5 (OIP5) overexpression prevented docetaxel-induced cell death in gastric cancer cells by activating MFN2/PINK1-mediated mitophagy. Instead, NIX-mediated mitophagy drives doxorubicin-resistance, whereas in the case of cisplatin/etoposide, the E3 ubiquitin-ligase ARIH1 -rather than Parkin- mediates PINK1-induced mitophagy of damaged mitochondria in response to cisplatin/etoposide. Together, these studies suggest that the expression of certain receptors or mediators of mitophagy in specific cancer subtypes is a decisive factor in eliciting therapy resistance by mitochondrial clearance. However, although high levels of mitophagy have been correlated with therapeutic resistance, ULK1-driven mitophagy activation has also been shown to have an antiproliferative effect in therapy-resistant colon cancer cell lines, implying that mitophagy could play a dual role in therapy resistance.

Mitochondrial clearance (or alternative pathways of mitochondrial removal) could also be involved in modulating cancer cell non-autonomous response to therapy-mediated cell death. Mitochondrial transfer from surrounding cells via microtubules could also contribute to cancer cell therapy resistance, since mitochondria from endothelial cells or stromal cells have been reported to increase the chemoresistance of breast cancer cells or leukemic cells, respectively.

Although the involvement of mitophagy has not been formally proven, blocking the release of the mitochondrial DAMP N-formyl peptides during immunogenic cancer cell death elicited in response to anthracyclines and reduces anti-tumor immunity, suggesting a potential regulatory role for mitochondrial clearance, an aspect that deserves further investigation.

When talking about therapy resistance, CSCs deserve special mention. CSCs are a subpopulation within cancer cells which is particularly resistant to therapy and which is responsible for the tumor repopulation after treatment (for a recent review on the topic, see). Interestingly, the ability of CSCs to resist therapy seems to correlate to their mitophagic capacity, since higher mitophagic levels were detected in cisplatin-resistant oral squamous cell carcinomas’ CSCs, as well as in oxaliplatin-resistant or doxorubicin-resistant human colorectal CSCs. In fact, blockade of mitophagy using a nanomedicine (188Re-Liposome) in chemotherapy-resistant ovarian cancer (stem) cells restored their sensitivity to the treatment not only in xenograft mice but also in two proof-of-concept therapy-resistant cancer patients. Regarding the role of mitophagy in CSC-chemoresistance, it has been pointed out that higher mitophagic levels contribute to a higher OXPHOS state within the CSC population to facilitate its proliferation; although in the case of therapy-resistance, it is more likely that mitophagy, by removing the damaged mitochondria, tightly controls ROS production and mitochondrial transmembrane potential, eventually reducing apoptotic cell death.

Altogether, preserving mitochondrial fitness by mitophagy provides cancer cells a mechanism to resist anti-cancer therapy (Figure 3); nevertheless, further research is necessary to understand which mitophagy players are instrumental for cancer drug- or radio-resistance in order to develop novel therapeutic strategies aiming to proficiently harness mitophagy in anti-cancer therapy.

Mitophagy and Cancer-Related Side Effects

Lastly, mitophagy is also relevant for off-target toxicities derived from anti-cancer therapies as well as from cancer itself. In terms of chemotherapeutics, one of the major side-effects related to doxorubicin treatment is its cardiotoxicity caused by enhanced Parkin-mediated or BNIP3-mediated mitophagy in cardiomyocytes.

Nonetheless, the most life-threatening side effect of cancer is cancer-associated cachexia: it occurs in more than 80% of the late-stage patients, it is directly associated to 20% of cancer-related deaths, and it constitutes a major prognostic factor independently of the cancer type. Cachexia is multifactorial syndrome characterized by muscular mass and adipose tissue loss together with anorexia and weakness and in cancer not only develops particularly fast but it can also be induced by the chemotherapeutic treatment. Cachectic muscle waste and loss have been associated to hypercatabolic breakdown of the muscle by autophagy: LC3B-II, ATG5 and Beclin1 have been shown to accumulate in skeletal muscle tissue from cachectic cancer patients and in cancer mouse models. Recently, it has been pointed out that excessive mitophagy in skeletal muscle cells would promote cachexia development. Alterations in BNIP3 or PINK1 transcript levels are found in cachectic muscle of cancer patients as well as in mouse models, but whether and how they regulate mitophagy-induced cachexia remains to be further studied.

In different cancer mouse models (and independently of chemotherapeutic treatment), cachectic muscle displayed alterations in mitochondrial homeostasis (such as mitochondrial uncoupling, aberrant mitochondrial expression of CL, as well as giant mitochondria unable to fuse proficiently), which would be then targeted for mitophagic degradation. Of note, UCP3, a mitochondrial protein that has been shown to accumulate in cancer-induced cachexia, is under the transcriptional control of Tumor Necrosis Factor alpha (TNFα) and certain pro-inflammatory cytokines seem to be highly pro-autophagic/pro-mitophagic in cachectic environments. For example, TNFα and IL-6 trans-signaling induced by the cancer cells accelerates autophagy/mitophagy in skeletal muscle, hereby promoting cachexia. Intriguingly, AMBRA1 has been associated with muscular atrophy, and has been recently shown to modulate the IL6-STAT3 axis, although no direct link to cancer-associated cachexia has been drawn yet.

In contrast to the putative detrimental effect of mitophagy in cancer patients, there are few cases where mitophagy induction in healthy tissue would be beneficial instead: renal failure is a side effect of cisplatin treatment and higher DRP1 levels and mitophagic levels in the renal tubular cells protect them from such a damage. In fact, rapamycin administration reduces cisplatin-mediated nephrotoxicity in C57Bl6 mice by stimulating PINK1/Parkin-mediated mitophagy in tubular renal cells. This suggests that rapamycin, possibly by enhancing mitophagy, could diminish chemotherapy-driven tissue damage.

Altogether, concomitant mitophagy modulation during chemotherapeutic treatment might contribute not only to overcoming cancer-cell resistance, but also to diminishing side toxicities derived from the treatment or the cancer itself. However, more mechanistic studies are necessary to understand the extent of the relationship between cancer-associated mitophagy and healthy tissue as well as the mitophagic pathways involved.

5. Conclusions and Perspectives

In the past years, the world of selective autophagy has grown tremendously, as has our understanding of the molecular underpinnings and physio-pathological implications of selective autophagy pathways. Among various selective degradation pathways operating in mammalian cells, mitophagy is emerging as a crucial determinant of cancer cell plasticity and interface with the TME. Reflecting the dynamic and plastic role of autophagy in carcinogenesis, mitochondrial clearance in cancer appears to operate as a mechanism recruited on-demand by the developing cancer cells to modulate key malignant features during cancer initiation and development. Growing evidence shows that mitophagy pathways act as key regulators of cancer cell mitochondrial mass, dynamics, redox homeostasis, bioenergetics, oncogene-driven metabolic reprogramming and cell death signals. This is perhaps not surprising, considering how mitochondrial biology and metabolic plasticity are central to cancer growth and response to anticancer therapies. The emerging view is that mitophagy represents a flexible mechanism supporting the metabolic adaptation and survival of cancer cells within the harsh TME.

However, from a therapeutic perspective, the redundancy in mitophagy receptors and alternative pathways for mitochondria clearance, which highlights the vital relevance of this process to maintain homeostasis, poses also key challenges when considering new therapeutic avenues harnessing pro-survival mitophagy in cancer treatment. Likewise, our knowledge of additional (and perhaps mitophagy-unrelated) functions of known mitophagy modulators and their link with oncogenic signals must be deepened in order to be able to advance more effective cancer treatments.

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    Not in our library10.1158/0008-5472.can-05-1134

  53. 53.

    Dhingra R., Gang H., Wang Y., Biala A.K., Aviv Y., Margulets V., Tee A., Kirshenbaum L.A. Bidirectional regulation of nuclear factor-kappaB and mammalian target of rapamycin signaling functionally links Bnip3 gene repression and cell survival of ventricular myocytes. Circ. Heart Fail. 2013;6:335-343.

    Not in our library10.1161/circheartfailure.112.000061

  54. 54.

    Frazier D.P., Wilson A., Graham R.M., Thompson J.W., Bishopric N.H., Webster K.A. Acidosis regulates the stability, hydrophobicity, and activity of the BH3-only protein Bnip3. Antioxid. Redox Signal. 2006;8:1625-1634.

    Not in our library10.1089/ars.2006.8.1625

  55. 55.

    Hendgen-Cotta U.B., Esfeld S., Rudi K., Miinalainen I., Klare J.P., Rassaf T. Cytosolic BNIP3 Dimer Interacts with Mitochondrial BAX Forming Heterodimers in the Mitochondrial Outer Membrane under Basal Conditions. Int. J. Mol. Sci. 2017;18:687.

    Not in our library10.3390/ijms18040687

  56. 56.

    Nakamura Y., Kitamura N., Shinogi D., Yoshida M., Goda O., Murai R., Kamino H., Arakawa H. BNIP3 and NIX mediate Mieap-induced accumulation of lysosomal proteins within mitochondria. PLoS ONE. 2012;7:e30767.

    Not in our library10.1371/journal.pone.0030767

  57. 57.

    Gugnoni M., Sancisi V., Gandolfi G., Manzotti G., Ragazzi M., Giordano D., Tamagnini I., Tigano M., Frasoldati A., Piana S., et al. Cadherin-6 promotes EMT and cancer metastasis by restraining autophagy. Oncogene. 2017;36:667-677.

    Not in our library10.1038/onc.2016.237

  58. 58.

    Landes T., Emorine L.J., Courilleau D., Rojo M., Belenguer P., Arnaune-Pelloquin L. The BH3-only Bnip3 binds to the dynamin Opa1 to promote mitochondrial fragmentation and apoptosis by distinct mechanisms. EMBO Rep. 2010;11:459-465.

    Not in our library10.1038/embor.2010.50

  59. 59.

    Liu K.E., Frazier W.A. Phosphorylation of the BNIP3 C-Terminus Inhibits Mitochondrial Damage and Cell Death without Blocking Autophagy. PLoS ONE. 2015;10:e0129667.

    Not in our library10.1371/journal.pone.0129667

  60. 60.

    Zhu Y., Massen S., Terenzio M., Lang V., Chen-Lindner S., Eils R., Novak I., Dikic I., Hamacher-Brady A., Brady N.R. Modulation of serines 17 and 24 in the LC3-interacting region of Bnip3 determines pro-survival mitophagy versus apoptosis. J. Biol. Chem. 2013;288:1099-1113.

    Not in our library10.1074/jbc.m112.399345

  61. 61.
  62. 62.

    Liu L., Feng D., Chen G., Chen M., Zheng Q., Song P., Ma Q., Zhu C., Wang R., Qi W., et al. Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells. Nat. Cell Biol. 2012;14:177-185.

    Not in our library10.1038/ncb2422

  63. 63.
  64. 64.

    Wu X., Wu F.H., Wu Q., Zhang S., Chen S., Sima M. Phylogenetic and Molecular Evolutionary Analysis of Mitophagy Receptors under Hypoxic Conditions. Front. Physiol. 2017;8:539.

    Not in our library10.3389/fphys.2017.00539

  65. 65.

    Wu W., Tian W., Hu Z., Chen G., Huang L., Li W., Zhang X., Xue P., Zhou C., Liu L., et al. ULK1 translocates to mitochondria and phosphorylates FUNDC1 to regulate mitophagy. EMBO Rep. 2014;15:566-575.

    Not in our library10.1002/embr.201438501

  66. 66.

    Sekine S., Kanamaru Y., Koike M., Nishihara A., Okada M., Kinoshita H., Kamiyama M., Maruyama J., Uchiyama Y., Ishihara N., et al. Rhomboid protease PARL mediates the mitochondrial membrane potential loss-induced cleavage of PGAM5. J. Biol. Chem. 2012;287:34635-34645.

    Not in our library10.1074/jbc.m112.357509

  67. 67.

    Chen M., Chen Z., Wang Y., Tan Z., Zhu C., Li Y., Han Z., Chen L., Gao R., Liu L., et al. Mitophagy receptor FUNDC1 regulates mitochondrial dynamics and mitophagy. Autophagy. 2016;12:689-702.

    Not in our library10.1080/15548627.2016.1151580

  68. 68.

    Sugo M., Kimura H., Arasaki K., Amemiya T., Hirota N., Dohmae N., Imai Y., Inoshita T., Shiba-Fukushima K., Hattori N., et al. Syntaxin 17 regulates the localization and function of PGAM5 in mitochondrial division and mitophagy. EMBO J. 2018;37.

    Not in our library10.15252/embj.201798899

  69. 69.

    Chen Z., Siraj S., Liu L., Chen Q. MARCH5-FUNDC1 axis fine-tunes hypoxia-induced mitophagy. Autophagy. 2017;13:1244-1245.

    Not in our library10.1080/15548627.2017.1310789

  70. 70.

    Chu C.T., Bayir H., Kagan V.E. LC3 binds externalized cardiolipin on injured mitochondria to signal mitophagy in neurons: Implications for Parkinson disease. Autophagy. 2014;10:376-378.

    Not in our library10.4161/auto.27191

  71. 71.

    Anton Z., Landajuela A., Hervas J.H., Montes L.R., Hernandez-Tiedra S., Velasco G., Goni F.M., Alonso A. Human Atg8-cardiolipin interactions in mitophagy: Specific properties of LC3B, GABARAPL2 and GABARAP. Autophagy. 2016;12:2386-2403.

    Not in our library10.1080/15548627.2016.1240856

  72. 72.

    Kagan V.E., Jiang J., Huang Z., Tyurina Y.Y., Desbourdes C., Cottet-Rousselle C., Dar H.H., Verma M., Tyurin V.A., Kapralov A.A., et al. NDPK-D (NM23-H4)-mediated externalization of cardiolipin enables elimination of depolarized mitochondria by mitophagy. Cell Death Differ. 2016;23:1140-1151.

    Not in our library10.1038/cdd.2015.160

  73. 73.

    Wei Y., Chiang W.C., Sumpter R., Mishra P., Levine B. Prohibitin 2 Is an Inner Mitochondrial Membrane Mitophagy Receptor. Cell. 2017;168:224-238.

    Not in our library10.1016/j.cell.2016.11.042

  74. 74.

    Richter-Dennerlein R., Korwitz A., Haag M., Tatsuta T., Dargazanli S., Baker M., Decker T., Lamkemeyer T., Rugarli E.I., Langer T. DNAJC19, a mitochondrial cochaperone associated with cardiomyopathy, forms a complex with prohibitins to regulate cardiolipin remodeling. Cell Metab. 2014;20:158-171.

    Not in our library10.1016/j.cmet.2014.04.016

  75. 75.

    Sentelle R.D., Senkal C.E., Jiang W., Ponnusamy S., Gencer S., Selvam S.P., Ramshesh V.K., Peterson Y.K., Lemasters J.J., Szulc Z.M., et al. Ceramide targets autophagosomes to mitochondria and induces lethal mitophagy. Nat. Chem. Biol. 2012;8:831-838.

    Not in our library10.1038/nchembio.1059

  76. 76.

    Van Humbeeck C., Cornelissen T., Hofkens H., Mandemakers W., Gevaert K., De Strooper B., Vandenberghe W. Parkin interacts with Ambra1 to induce mitophagy. J. Neurosci. 2011;31:10249-10261.

    Not in our library10.1523/jneurosci.1917-11.2011

  77. 77.

    Strappazzon F., Nazio F., Corrado M., Cianfanelli V., Romagnoli A., Fimia G.M., Campello S., Nardacci R., Piacentini M., Campanella M., et al. AMBRA1 is able to induce mitophagy via LC3 binding, regardless of PARKIN and p62/SQSTM1. Cell Death Differ. 2015;22:419-432.

    Not in our library10.1038/cdd.2014.139

  78. 78.

    Di Rita A., D’Acunzo P., Simula L., Campello S., Strappazzon F., Cecconi F. AMBRA1-Mediated Mitophagy Counteracts Oxidative Stress and Apoptosis Induced by Neurotoxicity in Human Neuroblastoma SH-SY5Y Cells. Front. Cell. Neurosci. 2018;12:92.

    Not in our library10.3389/fncel.2018.00092

  79. 79.
  80. 80.
  81. 81.

    Lampert M.A., Orogo A.M., Najor R.H., Hammerling B.C., Leon L.J., Wang B.J., Kim T., Sussman M.A., Gustafsson A.B. BNIP3L/NIX and FUNDC1-mediated mitophagy is required for mitochondrial network remodeling during cardiac progenitor cell differentiation. Autophagy. 2019;1-17.

    Not in our library10.1080/15548627.2019.1580095

  82. 82.

    Ju L., Chen S., Alimujiang M., Bai N., Yan H., Fang Q., Han J., Ma X., Yang Y., Jia W. A novel role for Bcl2l13 in promoting beige adipocyte biogenesis. Biochem. Biophys. Res. Commun. 2018;506:485-491.

    Not in our library10.1016/j.bbrc.2018.10.034

  83. 83.

    Bhujabal Z., Birgisdottir A.B., Sjottem E., Brenne H.B., Overvatn A., Habisov S., Kirkin V., Lamark T., Johansen T. FKBP8 recruits LC3A to mediate Parkin-independent mitophagy. EMBO Rep. 2017;18:947-961.

    Not in our library10.15252/embr.201643147

  84. 84.

    Saita S., Shirane M., Nakayama K.I. Selective escape of proteins from the mitochondria during mitophagy. Nat. Commun. 2013;4:1410.

    Not in our library10.1038/ncomms2400

  85. 85.

    Nishida Y., Arakawa S., Fujitani K., Yamaguchi H., Mizuta T., Kanaseki T., Komatsu M., Otsu K., Tsujimoto Y., Shimizu S. Discovery of Atg5/Atg7-independent alternative macroautophagy. Nature. 2009;461:654-658.

    Not in our library10.1038/nature08455

  86. 86.
  87. 87.
  88. 88.

    Bernardini J.P., Lazarou M., Dewson G. Parkin and mitophagy in cancer. Oncogene. 2017;36:1315-1327.

    Not in our library10.1038/onc.2016.302

  89. 89.

    Chen L., Zhang J., Lyu Z., Chen Y., Ji X., Cao H., Jin M., Zhu J., Yang J., Ling R., et al. Positive feedback loop between mitochondrial fission and Notch signaling promotes survivin-mediated survival of TNBC cells. Cell Death Dis. 2018;9:1050.

    Not in our library10.1038/s41419-018-1083-y

  90. 90.

    Huang Q., Zhan L., Cao H., Li J., Lyu Y., Guo X., Zhang J., Ji L., Ren T., An J., et al. Increased mitochondrial fission promotes autophagy and hepatocellular carcinoma cell survival through the ROS-modulated coordinated regulation of the NFKB and TP53 pathways. Autophagy. 2016;12:999-1014.

    Not in our library10.1080/15548627.2016.1166318

  91. 91.

    Philley J.V., Kannan A., Qin W., Sauter E.R., Ikebe M., Hertweck K.L., Troyer D.A., Semmes O.J., Dasgupta S. Complex-I Alteration and Enhanced Mitochondrial Fusion Are Associated With Prostate Cancer Progression. J. Cell Physiol. 2016;231:1364-1374.

    Not in our library10.1002/jcp.25240

  92. 92.

    Chakraborty P.K., Murphy B., Mustafi S.B., Dey A., Xiong X., Rao G., Naz S., Zhang M., Yang D., Dhanasekaran D.N., et al. Cystathionine beta-synthase regulates mitochondrial morphogenesis in ovarian cancer. FASEB J. 2018;32:4145-4157.

    Not in our library10.1096/fj.201701095r

  93. 93.

    Soares C.D., Morais T.M.L., Carlos R., de Almeida O.P., Mariano F.V., Altemani A., de Carvalho M.G.F., Correa M.B., Dos Reis R.R.D., Amorim L.S., et al. Prognostic importance of mitochondrial markers in mucosal and cutaneous head and neck melanomas. Hum. Pathol. 2019;85:279-289.

    Not in our library10.1016/j.humpath.2018.11.009

  94. 94.

    Fang C.L., Sun D.P., Chen H.K., Lin C.C., Hung S.T., Uen Y.H., Lin K.Y. Overexpression of Mitochondrial GTPase MFN2 Represents a Negative Prognostic Marker in Human Gastric Cancer and Its Inhibition Exerts Anti-Cancer Effects. J. Cancer. 2017;8:1153-1161.

    Not in our library10.7150/jca.17986

  95. 95.
  96. 96.

    Xu K., Chen G., Li X., Wu X., Chang Z., Xu J., Zhu Y., Yin P., Liang X., Dong L. MFN2 suppresses cancer progression through inhibition of mTORC2/Akt signaling. Sci. Rep. 2017;7:41718.

    Not in our library10.1038/srep41718

  97. 97.

    Wu Y., Zhou D., Xu X., Zhao X., Huang P., Zhou X., Song W., Guo H., Wang W., Zheng S. Clinical significance of mitofusin-2 and its signaling pathways in hepatocellular carcinoma. World J. Surg. Oncol. 2016;14:179.

    Not in our library10.1186/s12957-016-0922-5

  98. 98.

    Cheng C.T., Kuo C.Y., Ouyang C., Li C.F., Chung Y., Chan D.C., Kung H.J., Ann D.K. Metabolic Stress-Induced Phosphorylation of KAP1 Ser473 Blocks Mitochondrial Fusion in Breast Cancer Cells. Cancer Res. 2016;76:5006-5018.

    Not in our library10.1158/0008-5472.can-15-2921

  99. 99.

    Wang W., Xie Q., Zhou X., Yao J., Zhu X., Huang P., Zhang L., Wei J., Xie H., Zhou L., et al. Mitofusin-2 triggers mitochondria Ca2+ influx from the endoplasmic reticulum to induce apoptosis in hepatocellular carcinoma cells. Cancer Lett. 2015;358:47-58.

    Not in our library10.1016/j.canlet.2014.12.025

  100. 100.

    Kannan A., Wells R.B., Sivakumar S., Komatsu S., Singh K.P., Samten B., Philley J.V., Sauter E.R., Ikebe M., Idell S., et al. Mitochondrial Reprogramming Regulates Breast Cancer Progression. Clin. Cancer Res. 2016;22:3348-3360.

    Not in our library10.1158/1078-0432.ccr-15-2456

  101. 101.

    Cruz M.D., Ledbetter S., Chowdhury S., Tiwari A.K., Momi N., Wali R.K., Bliss C., Huang C., Lichtenstein D., Bhattacharya S., et al. Metabolic reprogramming of the premalignant colonic mucosa is an early event in carcinogenesis. Oncotarget. 2017;8:20543-20557.

    Not in our library10.18632/oncotarget.16129

  102. 102.

    Fang H.Y., Chen C.Y., Chiou S.H., Wang Y.T., Lin T.Y., Chang H.W., Chiang I.P., Lan K.J., Chow K.C. Overexpression of optic atrophy 1 protein increases cisplatin resistance via inactivation of caspase-dependent apoptosis in lung adenocarcinoma cells. Hum. Pathol. 2012;43:105-114.

    Not in our library10.1016/j.humpath.2011.04.012

  103. 103.

    Kang J.U., Koo S.H., Kwon K.C., Park J.W., Kim J.M. Identification of novel candidate target genes, including EPHB3, MASP1 and SST at 3q26.2-q29 in squamous cell carcinoma of the lung. BMC Cancer. 2009;9:237.

    Not in our library10.1186/1471-2407-9-237

  104. 104.

    Zhao X., Tian C., Puszyk W.M., Ogunwobi O.O., Cao M., Wang T., Cabrera R., Nelson D.R., Liu C. OPA1 downregulation is involved in sorafenib-induced apoptosis in hepatocellular carcinoma. Lab. Investig. 2013;93:8-19.

    Not in our library10.1038/labinvest.2012.144

  105. 105.

    Tanwar D.K., Parker D.J., Gupta P., Spurlock B., Alvarez R.D., Basu M.K., Mitra K. Crosstalk between the mitochondrial fission protein, Drp1, and the cell cycle is identified across various cancer types and can impact survival of epithelial ovarian cancer patients. Oncotarget. 2016;7:60021-60037.

    Not in our library10.18632/oncotarget.11047

  106. 106.

    Kim Y.Y., Yun S.H., Yun J. Downregulation of Drp1, a fission regulator, is associated with human lung and colon cancers. Acta Biochim. Biophys. Sin. (Shanghai). 2018;50:209-215.

    Not in our library10.1093/abbs/gmx137

  107. 107.
  108. 108.

    Wieder S.Y., Serasinghe M.N., Sung J.C., Choi D.C., Birge M.B., Yao J.L., Bernstein E., Celebi J.T., Chipuk J.E. Activation of the Mitochondrial Fragmentation Protein DRP1 Correlates with BRAF(V600E) Melanoma. J. Investig. Dermatol. 2015;135:2544-2547.

    Not in our library10.1038/jid.2015.196

  109. 109.

    Li J., Huang Q., Long X., Guo X., Sun X., Jin X., Li Z., Ren T., Yuan P., Huang X., et al. Mitochondrial elongation-mediated glucose metabolism reprogramming is essential for tumour cell survival during energy stress. Oncogene. 2017;36:4901-4912.

    Not in our library10.1038/onc.2017.98

  110. 110.

    Tak H., Kang H., Ji E., Hong Y., Kim W., Lee E.K. Potential use of TIA-1, MFF, microRNA-200a-3p, and microRNA-27 as a novel marker for hepatocellular carcinoma. Biochem. Biophys. Res. Commun. 2018;497:1117-1122.

    Not in our library10.1016/j.bbrc.2018.02.189

  111. 111.

    Fan S., Liu B., Sun L., Lv X.B., Lin Z., Chen W., Chen W., Tang Q., Wang Y., Su Y., et al. Mitochondrial fission determines cisplatin sensitivity in tongue squamous cell carcinoma through the BRCA1-miR-593-5p-MFF axis. Oncotarget. 2015;6:14885-14904.

    Not in our library10.18632/oncotarget.3659

  112. 112.

    Abo Elwafa R., Gamaleldin M., Ghallab O. The clinical and prognostic significance of FIS1, SPI1, PDCD7 and Ang2 expression levels in acute myeloid leukemia. Cancer Genet. 2018.

    Not in our library10.1016/j.cancergen.2018.12.001

  113. 113.

    Tian Y., Huang Z., Wang Z., Yin C., Zhou L., Zhang L., Huang K., Zhou H., Jiang X., Li J., et al. Identification of novel molecular markers for prognosis estimation of acute myeloid leukemia: Over-expression of PDCD7, FIS1 and Ang2 may indicate poor prognosis in pretreatment patients with acute myeloid leukemia. PLoS ONE. 2014;9:e84150.

    Not in our library10.1371/journal.pone.0084150

  114. 114.

    Hsiao C.P., Wang D., Kaushal A., Saligan L. Mitochondria-related gene expression changes are associated with fatigue in patients with nonmetastatic prostate cancer receiving external beam radiation therapy. Cancer Nurs. 2013;36:189-197.

    Not in our library10.1097/ncc.0b013e318263f514

  115. 115.

    Fan S., Chen W.X., Lv X.B., Tang Q.L., Sun L.J., Liu B.D., Zhong J.L., Lin Z.Y., Wang Y.Y., Li Q.X., et al. miR-483-5p determines mitochondrial fission and cisplatin sensitivity in tongue squamous cell carcinoma by targeting FIS1. Cancer Lett. 2015;362:183-191.

    Not in our library10.1016/j.canlet.2015.03.045

  116. 116.

    Chang G., Zhang W., Ma Y., Wen Q. PINK1 Expression Is Associated with Poor Prognosis in Lung Adenocarcinoma. Tohoku J. Exp Med. 2018;245:115-121.

    Not in our library10.1620/tjem.245.115

  117. 117.

    Yamashita K., Miyata H., Makino T., Masuike Y., Furukawa H., Tanaka K., Miyazaki Y., Takahashi T., Kurokawa Y., Yamasaki M., et al. High Expression of the Mitophagy-Related Protein Pink1 is Associated with a Poor Response to Chemotherapy and a Poor Prognosis for Patients Treated with Neoadjuvant Chemotherapy for Esophageal Squamous Cell Carcinoma. Ann. Surg. Oncol. 2017;24:4025-4032.

    Not in our library10.1245/s10434-017-6096-8

  118. 118.

    Unoki M., Nakamura Y. Growth-suppressive effects of BPOZ and EGR2, two genes involved in the PTEN signaling pathway. Oncogene. 2001;20:4457-4465.

    Not in our library10.1038/sj.onc.1204608

  119. 119.

    Poulogiannis G., McIntyre R.E., Dimitriadi M., Apps J.R., Wilson C.H., Ichimura K., Luo F., Cantley L.C., Wyllie A.H., Adams D.J., et al. PARK2 deletions occur frequently in sporadic colorectal cancer and accelerate adenoma development in Apc mutant mice. Proc. Natl. Acad. Sci. USA. 2010;107:15145-15150.

    Not in our library10.1073/pnas.1009941107

  120. 120.

    Bhat Z.I., Kumar B., Bansal S., Naseem A., Tiwari R.R., Wahabi K., Sharma G.D., Alam Rizvi M.M. Association of PARK2 promoter polymorphisms and methylation with colorectal cancer in North Indian population. Gene. 2019;682:25-32.

    Not in our library10.1016/j.gene.2018.10.010

  121. 121.

    da Silva-Camargo C.C.V., Svoboda Baldin R.K., Costacurta Polli N.L., Agostinho A.P., Olandosk M., de Noronha L., Sotomaior V.S. Parkin protein expression and its impact on survival of patients with advanced colorectal cancer. Cancer Biol. Med. 2018;15:61-69.

    Not in our library10.20892/j.issn.2095-3941.2017.0136

  122. 122.

    Hu H.H., Kannengiesser C., Lesage S., Andre J., Mourah S., Michel L., Descamps V., Basset-Seguin N., Bagot M., Bensussan A., et al. PARKIN Inactivation Links Parkinson’s Disease to Melanoma. J. Natl. Cancer Inst. 2016;108.

    Not in our library10.1093/jnci/djv340

  123. 123.

    Gao G., Kasperbauer J.L., Tombers N.M., Wang V., Mayer K., Smith D.I. A selected group of large common fragile site genes have decreased expression in oropharyngeal squamous cell carcinomas. Genes Chromosom. Cancer. 2014;53:392-401.

    Not in our library10.1002/gcc.22150

  124. 124.

    Toma M.I., Wuttig D., Kaiser S., Herr A., Weber T., Zastrow S., Koch R., Meinhardt M., Baretton G.B., Wirth M.P., et al. PARK2 and PACRG are commonly downregulated in clear-cell renal cell carcinoma and are associated with aggressive disease and poor clinical outcome. Genes Chromosom. Cancer. 2013;52:265-273.

    Not in our library10.1002/gcc.22026

  125. 125.

    Mehdi S.J., Ali A., Rizvi M.M. Parkin gene alterations in ovarian carcinoma from northern Indian population. Pathol. Oncol. Res. 2011;17:579-586.

    Not in our library10.1007/s12253-010-9351-x

  126. 126.

    Agirre X., Roman-Gomez J., Vazquez I., Jimenez-Velasco A., Garate L., Montiel-Duarte C., Artieda P., Cordeu L., Lahortiga I., Calasanz M.J., et al. Abnormal methylation of the common PARK2 and PACRG promoter is associated with downregulation of gene expression in acute lymphoblastic leukemia and chronic myeloid leukemia. Int. J. Cancer. 2006;118:1945-1953.

    Not in our library10.1002/ijc.21584

  127. 127.

    Li C., Zhang Y., Cheng X., Yuan H., Zhu S., Liu J., Wen Q., Xie Y., Liu J., Kroemer G., et al. PINK1 and PARK2 Suppress Pancreatic Tumorigenesis through Control of Mitochondrial Iron-Mediated Immunometabolism. Dev. Cell. 2018;46:441-455.

    Not in our library10.1016/j.devcel.2018.07.012

  128. 128.

    Jiang Z., Yu F., Li M. Upregulation of BCL2 19 kD Protein-Interacting Protein 3 (BNIP3) is Predictive of Unfavorable Prognosis in Uveal Melanoma. Med. Sci. Monit. 2018;24:4711-4717.

    Not in our library10.12659/msm.907679

  129. 129.
  130. 130.

    Xu Q., Junttila S., Scherer A., Giri K.R., Kivela O., Skovorodkin I., Roning J., Quaggin S.E., Marti H.P., Shan J., et al. Renal carcinoma/kidney progenitor cell chimera organoid as a novel tumorigenesis gene discovery model. Dis. Model. Mech. 2017;10:1503-1515.

    Not in our library10.1242/dmm.028332

  131. 131.

    Chen J.L., David J., Cook-Spaeth D., Casey S., Cohen D., Selvendiran K., Bekaii-Saab T., Hays J.L. Autophagy Induction Results in Enhanced Anoikis Resistance in Models of Peritoneal Disease. Mol. Cancer Res. 2017;15:26-34.

    Not in our library10.1158/1541-7786.mcr-16-0200-t

  132. 132.

    Fujimoto T., Ohtsuka T., Date K., Kimura H., Matsunaga T., Mori Y., Miyasaka Y., Mochidome N., Oda Y., Nakamura M. Expression of Bcl-2 19-kDa interacting protein 3 predicts prognosis after ampullary carcinoma resection. J. Hepatobiliary Pancreat Sci. 2016;23:489-496.

    Not in our library10.1002/jhbp.367

  133. 133.

    Koo J.S., Kim J.W., Yoon J.S. Expression of Autophagy and Reactive Oxygen Species-Related Proteins in Lacrimal Gland Adenoid Cystic Carcinoma. Yonsei Med. J. 2016;57:482-489.

    Not in our library10.3349/ymj.2016.57.2.482

  134. 134.

    Petrova V., Mancini M., Agostini M., Knight R.A., Annicchiarico-Petruzzelli M., Barlev N.A., Melino G., Amelio I. TAp73 transcriptionally represses BNIP3 expression. Cell Cycle. 2015;14:2484-2493.

    Not in our library10.1080/15384101.2015.1044178

  135. 135.

    Thongchot S., Yongvanit P., Loilome W., Seubwai W., Phunicom K., Tassaneeyakul W., Pairojkul C., Promkotra W., Techasen A., Namwat N. High expression of HIF-1alpha, BNIP3 and PI3KC3: Hypoxia-induced autophagy predicts cholangiocarcinoma survival and metastasis. Asian Pac. J. Cancer Prev. 2014;15:5873-5878.

    Not in our library10.7314/apjcp.2014.15.14.5873

  136. 136.

    Kuiper C., Dachs G.U., Munn D., Currie M.J., Robinson B.A., Pearson J.F., Vissers M.C. Increased Tumor Ascorbate is Associated with Extended Disease-Free Survival and Decreased Hypoxia-Inducible Factor-1 Activation in Human Colorectal Cancer. Front. Oncol. 2014;4:10.

    Not in our library10.3389/fonc.2014.00010

  137. 137.

    Karpathiou G., Sivridis E., Koukourakis M., Mikroulis D., Bouros D., Froudarakis M., Bougioukas G., Maltezos E., Giatromanolaki A. Autophagy and Bcl-2/BNIP3 death regulatory pathway in non-small cell lung carcinomas. APMIS. 2013;121:592-604.

    Not in our library10.1111/apm.12026

  138. 138.

    Hu Y.L., DeLay M., Jahangiri A., Molinaro A.M., Rose S.D., Carbonell W.S., Aghi M.K. Hypoxia-induced autophagy promotes tumor cell survival and adaptation to antiangiogenic treatment in glioblastoma. Cancer Res. 2012;72:1773-1783.

    Not in our library10.1158/0008-5472.can-11-3831

  139. 139.

    Petry I.B., Fieber E., Schmidt M., Gehrmann M., Gebhard S., Hermes M., Schormann W., Selinski S., Freis E., Schwender H., et al. ERBB2 induces an antiapoptotic expression pattern of Bcl-2 family members in node-negative breast cancer. Clin. Cancer Res. 2010;16:451-460.

    Not in our library10.1158/1078-0432.ccr-09-1617

  140. 140.

    Lukashova-v Zangen I., Kneitz S., Monoranu C.M., Rutkowski S., Hinkes B., Vince G.H., Huang B., Roggendorf W. Ependymoma gene expression profiles associated with histological subtype, proliferation, and patient survival. Acta Neuropathol. 2007;113:325-337.

    Not in our library10.1007/s00401-006-0190-5

  141. 141.

    Leo C., Horn L.C., Hockel M. Hypoxia and expression of the proapoptotic regulator BNIP3 in cervical cancer. Int. J. Gynecol. Cancer. 2006;16:1314-1320.

    Not in our library10.1136/ijgc-00009577-200605000-00055

  142. 142.

    An J.S., Huang M.N., Song Y.M., Li N., Wu L.Y., Zhan Q.M. A preliminary study of genes related to concomitant chemoradiotherapy resistance in advanced uterine cervical squamous cell carcinoma. Chin. Med. J. (Engl.). 2013;126:4109-4115.

    Not in our library

  143. 143.

    Macher-Goeppinger S., Keith M., Hatiboglu G., Hohenfellner M., Schirmacher P., Roth W., Tagscherer K.E. Expression and Functional Characterization of the BNIP3 Protein in Renal Cell Carcinomas. Transl. Oncol. 2017;10:869-875.

    Not in our library10.1016/j.tranon.2017.08.008

  144. 144.
  145. 145.

    He J., Pei L., Jiang H., Yang W., Chen J., Liang H. Chemoresistance of colorectal cancer to 5-fluorouracil is associated with silencing of the BNIP3 gene through aberrant methylation. J. Cancer. 2017;8:1187-1196.

    Not in our library10.7150/jca.18171

  146. 146.

    Sambuudash O., Kim H.S., Cho M.Y. Lack of Aberrant Methylation in an Adjacent Area of Left-Sided Colorectal Cancer. Yonsei Med. J. 2017;58:749-755.

    Not in our library10.3349/ymj.2017.58.4.749

  147. 147.

    Peng X., Xue H., Lu L., Shi P., Wang J., Wang J. Accumulated promoter methylation as a potential biomarker for esophageal cancer. Oncotarget. 2017;8:679-691.

    Not in our library10.18632/oncotarget.13510

  148. 148.

    Kamino H., Nakamura Y., Tsuneki M., Sano H., Miyamoto Y., Kitamura N., Futamura M., Kanai Y., Taniguchi H., Shida D., et al. Mieap-regulated mitochondrial quality control is frequently inactivated in human colorectal cancer. Oncogenesis. 2016;4:e181.

    Not in our library10.1038/oncsis.2015.43

  149. 149.

    Simsek B.C., Turk B.A., Ozen F., Tuzcu M., Kanter M. Investigation of telomerase activity and apoptosis on invasive ductal carcinoma of the breast using immunohistochemical and Western blot methods. Eur. Rev. Med. Pharm. Sci. 2015;19:3089-3099.

    Not in our library

  150. 150.

    Liu Z., Zhang J., Gao Y., Pei L., Zhou J., Gu L., Zhang L., Zhu B., Hattori N., Ji J., et al. Large-scale characterization of DNA methylation changes in human gastric carcinomas with and without metastasis. Clin. Cancer Res. 2014;20:4598-4612.

    Not in our library10.1158/1078-0432.ccr-13-3380

  151. 151.

    Garcia-Baquero R., Puerta P., Beltran M., Alvarez-Mujica M., Alvarez-Ossorio J.L., Sanchez-Carbayo M. Methylation of tumor suppressor genes in a novel panel predicts clinical outcome in paraffin-embedded bladder tumors. Tumour Biol.: J. Int. Soc. Oncodevelopmental Biol. Med. 2014;35:5777-5786.

    Not in our library10.1007/s13277-014-1767-6

  152. 152.

    Garcia-Baquero R., Puerta P., Beltran M., Alvarez M., Sacristan R., Alvarez-Ossorio J.L., Sanchez-Carbayo M. Methylation of a novel panel of tumor suppressor genes in urine moves forward noninvasive diagnosis and prognosis of bladder cancer: A 2-center prospective study. J. Urol. 2013;190:723-730.

    Not in our library10.1016/j.juro.2013.01.105

  153. 153.

    Deng Q., Huang C.M., Chen N., Li L., Wang X.D., Zhang W., Bi F., Tang Q.L., Li Z.P., Wang W. Chemotherapy and radiotherapy downregulate the activity and expression of DNA methyltransferase and enhance Bcl-2/E1B-19-kDa interacting protein-3-induced apoptosis in human colorectal cancer cells. Chemotherapy. 2012;58:445-453.

    Not in our library10.1159/000345916

  154. 154.

    Jin T., Lin H.X., Lin H., Guo L.B., Ge N., Cai X.Y., Sun R., Chen W.K., Li Q.L., Hu W.H. Expression TGM2 and BNIP3 have prognostic significance in laryngeal cancer patients receiving surgery and postoperative radiotherapy: A retrospective study. J. Transl. Med. 2012;10:64.

    Not in our library10.1186/1479-5876-10-64

  155. 155.

    Sugita H., Iida S., Inokuchi M., Kato K., Ishiguro M., Ishikawa T., Takagi Y., Enjoji M., Yamada H., Uetake H., et al. Methylation of BNIP3 and DAPK indicates lower response to chemotherapy and poor prognosis in gastric cancer. Oncol. Rep. 2011;25:513-518.

    Not in our library10.3892/or.2010.1085

  156. 156.

    Hiraki M., Kitajima Y., Koga Y., Tanaka T., Nakamura J., Hashiguchi K., Noshiro H., Miyazaki K. Aberrant gene methylation is a biomarker for the detection of cancer cells in peritoneal wash samples from advanced gastric cancer patients. Ann. Surg. Oncol. 2011;18:3013-3019.

    Not in our library10.1245/s10434-011-1636-0

  157. 157.

    Shimizu S., Iida S., Ishiguro M., Uetake H., Ishikawa T., Takagi Y., Kobayashi H., Higuchi T., Enomoto M., Mogushi K., et al. Methylated BNIP3 gene in colorectal cancer prognosis. Oncol. Lett. 2010;1:865-872.

    Not in our library10.3892/ol_00000153

  158. 158.

    Hiraki M., Kitajima Y., Nakafusa Y., Nakamura J., Hashiguchi K., Sumi K., Noshiro H., Miyazaki K. CpG island methylation of BNIP3 predicts resistance against S-1/CPT-11 combined therapy in colorectal cancer patients. Oncol. Rep. 2010;23:191-197.

    Not in our library

  159. 159.

    Jourdan M., Reme T., Goldschmidt H., Fiol G., Pantesco V., De Vos J., Rossi J.F., Hose D., Klein B. Gene expression of anti- and pro-apoptotic proteins in malignant and normal plasma cells. Br. J. Haematol. 2009;145:45-58.

    Not in our library10.1111/j.1365-2141.2008.07562.x

  160. 160.

    Heller G., Schmidt W.M., Ziegler B., Holzer S., Mullauer L., Bilban M., Zielinski C.C., Drach J., Zochbauer-Muller S. Genome-wide transcriptional response to 5-aza-2’-deoxycytidine and trichostatin a in multiple myeloma cells. Cancer Res. 2008;68:44-54.

    Not in our library10.1158/0008-5472.can-07-2531

  161. 161.

    Erkan M., Kleeff J., Esposito I., Giese T., Ketterer K., Buchler M.W., Giese N.A., Friess H. Loss of BNIP3 expression is a late event in pancreatic cancer contributing to chemoresistance and worsened prognosis. Oncogene. 2005;24:4421-4432.

    Not in our library10.1038/sj.onc.1208642

  162. 162.

    Akada M., Crnogorac-Jurcevic T., Lattimore S., Mahon P., Lopes R., Sunamura M., Matsuno S., Lemoine N.R. Intrinsic chemoresistance to gemcitabine is associated with decreased expression of BNIP3 in pancreatic cancer. Clin. Cancer Res. 2005;11:3094-3101.

    Not in our library10.1158/1078-0432.ccr-04-1785

  163. 163.

    Castro M., Grau L., Puerta P., Gimenez L., Venditti J., Quadrelli S., Sanchez-Carbayo M. Multiplexed methylation profiles of tumor suppressor genes and clinical outcome in lung cancer. J. Transl. Med. 2010;8:86.

    Not in our library10.1186/1479-5876-8-86

  164. 164.

    Lin Z., Li J.W., Wang Y., Chen T., Ren N., Yang L., Xu W., He H., Jiang Y., Chen X., et al. Abnormal miRNA-30e Expression is Associated with Breast Cancer Progression. Clin. Lab. 2016;62:121-128.

    Not in our library10.7754/clin.lab.2015.150607

  165. 165.
  166. 166.

    Liu W., Xie C.C., Zhu Y., Li T., Sun J., Cheng Y., Ewing C.M., Dalrymple S., Turner A.R., Sun J., et al. Homozygous deletions and recurrent amplifications implicate new genes involved in prostate cancer. Neoplasia. 2008;10:897-907.

    Not in our library10.1593/neo.08428

  167. 167.

    Eisele L., Klein-Hitpass L., Chatzimanolis N., Opalka B., Boes T., Seeber S., Moritz T., Flasshove M. Differential expression of drug-resistance-related genes between sensitive and resistant blasts in acute myeloid leukemia. Acta Haematol. 2007;117:8-15.

    Not in our library10.1159/000096854

  168. 168.

    Wu L., Zhang D., Zhou L., Pei Y., Zhuang Y., Cui W., Chen J. FUN14 domain-containing 1 promotes breast cancer proliferation and migration by activating calcium-NFATC1-BMI1 axis. EBioMedicine. 2019;41:384-394.

    Not in our library10.1016/j.ebiom.2019.02.032

  169. 169.

    Hui L., Wu H., Wang T.W., Yang N., Guo X., Jang X.J. Hydrogen peroxide-induced mitophagy contributes to laryngeal cancer cells survival via the upregulation of FUNDC1. Clin. Transl. Oncol. 2018.

    Not in our library10.1007/s12094-018-1958-5

  170. 170.

    Hou H., Er P., Cheng J., Chen X., Ding X., Wang Y., Chen X., Yuan Z., Pang Q., Wang P., et al. High expression of FUNDC1 predicts poor prognostic outcomes and is a promising target to improve chemoradiotherapy effects in patients with cervical cancer. Cancer Med. 2017;6:1871-1881.

    Not in our library10.1002/cam4.1112

  171. 171.

    Cheng J., Qian D., Ding X., Song T., Cai M., Dan X., Wang Y., Zhao J., Liu Z., Wu Z., et al. High PGAM5 expression induces chemoresistance by enhancing Bcl-xL-mediated anti-apoptotic signaling and predicts poor prognosis in hepatocellular carcinoma patients. Cell Death Dis. 2018;9:991.

    Not in our library10.1038/s41419-018-1017-8

  172. 172.

    Ng Kee Kwong F., Nicholson A.G., Pavlidis S., Adcock I.M., Chung K.F. PGAM5 expression and macrophage signatures in non-small cell lung cancer associated with chronic obstructive pulmonary disease (COPD). BMC Cancer. 2018;18:1238.

    Not in our library10.1186/s12885-018-5140-9

  173. 173.

    Randall E.C., Zadra G., Chetta P., Lopez B.G.C., Syamala S., Basu S.S., Agar J.N., Loda M., Tempany C.M., Fennessy F.M., et al. Molecular Characterization of Prostate Cancer with Associated Gleason Score Using Mass Spectrometry Imaging. Mol. Cancer Res. 2019.

    Not in our library10.1158/1541-7786.mcr-18-1057

  174. 174.

    Sapandowski A., Stope M., Evert K., Evert M., Zimmermann U., Peter D., Page I., Burchardt M., Schild L. Cardiolipin composition correlates with prostate cancer cell proliferation. Mol. Cell Biochem. 2015;410:175-185.

    Not in our library10.1007/s11010-015-2549-1

  175. 175.

    Zhong H., Xiao M., Zarkovic K., Zhu M., Sa R., Lu J., Tao Y., Chen Q., Xia L., Cheng S., et al. Mitochondrial control of apoptosis through modulation of cardiolipin oxidation in hepatocellular carcinoma: A novel link between oxidative stress and cancer. Free Radic. Biol. Med. 2017;102:67-76.

    Not in our library10.1016/j.freeradbiomed.2016.10.494

  176. 176.

    Cai X.W., Yu W.W., Yu W., Zhang Q., Feng W., Liu M.N., Sun M.H., Xiang J.Q., Zhang Y.W., Fu X.L. Tissue-based quantitative proteomics to screen and identify the potential biomarkers for early recurrence/metastasis of esophageal squamous cell carcinoma. Cancer Med. 2018;7:2504-2517.

    Not in our library10.1002/cam4.1463

  177. 177.

    Ross J.A., Robles-Escajeda E., Oaxaca D.M., Padilla D.L., Kirken R.A. The prohibitin protein complex promotes mitochondrial stabilization and cell survival in hematologic malignancies. Oncotarget. 2017;8:65445-65456.

    Not in our library10.18632/oncotarget.18920

  178. 178.

    Yoshimaru T., Ono M., Bando Y., Chen Y.A., Mizuguchi K., Shima H., Komatsu M., Imoto I., Izumi K., Honda J., et al. A-kinase anchoring protein BIG3 coordinates oestrogen signalling in breast cancer cells. Nat. Commun. 2017;8:15427.

    Not in our library10.1038/ncomms15427

  179. 179.

    Zuo X., Chen L., Liu L., Zhang Z., Zhang X., Yu Q., Feng L., Zhao X., Qin T. Identification of a panel of complex autoantigens (LGALS3, PHB2, MUC1, and GK2) in combination with CA15-3 for the diagnosis of early-stage breast cancer. Tumour Biol.: J. Int. Soc. Oncodevelopmental Biol. Med. 2016;37:1309-1317.

    Not in our library10.1007/s13277-015-3932-y

  180. 180.

    Mengwasser J., Piau A., Schlag P., Sleeman J.P. Differential immunization identifies PHB1/PHB2 as blood-borne tumor antigens. Oncogene. 2004;23:7430-7435.

    Not in our library10.1038/sj.onc.1207987

  181. 181.

    Abuhusain H.J., Matin A., Qiao Q., Shen H., Kain N., Day B.W., Stringer B.W., Daniels B., Laaksonen M.A., Teo C., et al. A metabolic shift favoring sphingosine 1-phosphate at the expense of ceramide controls glioblastoma angiogenesis. J. Biol. Chem. 2013;288:37355-37364.

    Not in our library10.1074/jbc.m113.494740

  182. 182.

    Koybasi S., Senkal C.E., Sundararaj K., Spassieva S., Bielawski J., Osta W., Day T.A., Jiang J.C., Jazwinski S.M., Hannun Y.A., et al. Defects in cell growth regulation by C18:0-ceramide and longevity assurance gene 1 in human head and neck squamous cell carcinomas. J. Biol. Chem. 2004;279:44311-44319.

    Not in our library10.1074/jbc.m406920200

  183. 183.

    Wang Z., Wen L., Zhu F., Wang Y., Xie Q., Chen Z., Li Y. Overexpression of ceramide synthase 1 increases C18-ceramide and leads to lethal autophagy in human glioma. Oncotarget. 2017;8:104022-104036.

    Not in our library10.18632/oncotarget.21955

  184. 184.

    Qu B., Yao L., Ma H.L., Chen H.L., Zhang Z., Xie J. Prognostic significance of autophagy-related proteins expression in resected human gastric adenocarcinoma. J. Huazhong Univ. Sci. Technol. Med. Sci. 2017;37:37-43.

    Not in our library10.1007/s11596-017-1691-2

  185. 185.

    Nitta T., Sato Y., Ren X.S., Harada K., Sasaki M., Hirano S., Nakanuma Y. Autophagy may promote carcinoma cell invasion and correlate with poor prognosis in cholangiocarcinoma. Int. J. Clin. Exp. Pathol. 2014;7:4913-4921.

    Not in our library

  186. 186.

    Ko Y.H., Cho Y.S., Won H.S., Jeon E.K., An H.J., Hong S.U., Park J.H., Lee M.A. Prognostic significance of autophagy-related protein expression in resected pancreatic ductal adenocarcinoma. Pancreas. 2013;42:829-835.

    Not in our library10.1097/mpa.0b013e318279d0dc

  187. 187.

    Falasca L., Torino F., Marconi M., Costantini M., Pompeo V., Sentinelli S., De Salvo L., Patrizio M., Padula C., Gallucci M., et al. AMBRA1 and SQSTM1 expression pattern in prostate cancer. Apoptosis. 2015;20:1577-1586.

    Not in our library10.1007/s10495-015-1176-3

  188. 188.

    Walker B.A., Mavrommatis K., Wardell C.P., Ashby T.C., Bauer M., Davies F.E., Rosenthal A., Wang H., Qu P., Hoering A., et al. Identification of novel mutational drivers reveals oncogene dependencies in multiple myeloma. Blood. 2018;132:587-597.

    Not in our library10.1182/blood-2018-03-840132

  189. 189.

    Yang D., Cheng D., Tu Q., Yang H., Sun B., Yan L., Dai H., Luo J., Mao B., Cao Y., et al. HUWE1 controls the development of non-small cell lung cancer through down-regulation of p53. Theranostics. 2018;8:3517-3529.

    Not in our library10.7150/thno.24401

  190. 190.

    Li Z., Peng Z., Gu S., Zheng J., Feng D., Qin Q., He J. Global Analysis of miRNA-mRNA Interaction Network in Breast Cancer with Brain Metastasis. Anticancer Res. 2017;37:4455-4468.

    Not in our library10.21873/anticanres.11841

  191. 191.

    Kodama T., Newberg J.Y., Kodama M., Rangel R., Yoshihara K., Tien J.C., Parsons P.H., Wu H., Finegold M.J., Copeland N.G., et al. Transposon mutagenesis identifies genes and cellular processes driving epithelial-mesenchymal transition in hepatocellular carcinoma. Proc. Natl. Acad. Sci. USA. 2016;113:E3384-E3393.

    Not in our library10.1073/pnas.1606876113

  192. 192.

    Cheng D.D., Yu T., Hu T., Yao M., Fan C.Y., Yang Q.C. MiR-542-5p is a negative prognostic factor and promotes osteosarcoma tumorigenesis by targeting HUWE1. Oncotarget. 2015;6:42761-42772.

    Not in our library10.18632/oncotarget.6199

  193. 193.

    Yang Y.L., Lin S.R., Chen J.S., Lin S.W., Yu S.L., Chen H.Y., Yen C.T., Lin C.Y., Lin J.F., Lin K.H., et al. Expression and prognostic significance of the apoptotic genes BCL2L13, Livin, and CASP8AP2 in childhood acute lymphoblastic leukemia. Leuk Res. 2010;34:18-23.

    Not in our library10.1016/j.leukres.2009.07.023

  194. 194.

    Tahir S.K., Wass J., Joseph M.K., Devanarayan V., Hessler P., Zhang H., Elmore S.W., Kroeger P.E., Tse C., Rosenberg S.H., et al. Identification of expression signatures predictive of sensitivity to the Bcl-2 family member inhibitor ABT-263 in small cell lung carcinoma and leukemia/lymphoma cell lines. Mol. Cancer Ther. 2010;9:545-557.

    Not in our library10.1158/1535-7163.mct-09-0651

  195. 195.

    Holleman A., den Boer M.L., de Menezes R.X., Cheok M.H., Cheng C., Kazemier K.M., Janka-Schaub G.E., Gobel U., Graubner U.B., Evans W.E., et al. The expression of 70 apoptosis genes in relation to lineage, genetic subtype, cellular drug resistance, and outcome in childhood acute lymphoblastic leukemia. Blood. 2006;107:769-776.

    Not in our library10.1182/blood-2005-07-2930

  196. 196.

    Millino C., Maretto I., Pacchioni B., Digito M., De Paoli A., Canzonieri V., D’Angelo E., Agostini M., Rizzolio F., Giordano A., et al. Gene and MicroRNA Expression Are Predictive of Tumor Response in Rectal Adenocarcinoma Patients Treated With Preoperative Chemoradiotherapy. J. Cell Physiol. 2017;232:426-435.

    Not in our library10.1002/jcp.25441

  197. 197.

    Leon-Mateos L., Casas H., Abalo A., Vieito M., Abreu M., Anido U., Gomez-Tato A., Lopez R., Abal M., Muinelo-Romay L. Improving circulating tumor cells enumeration and characterization to predict outcome in first line chemotherapy mCRPC patients. Oncotarget. 2017;8:54708-54721.

    Not in our library10.18632/oncotarget.18025

  198. 198.

    da Silva S.D., Marchi F.A., Xu B., Bijian K., Alobaid F., Mlynarek A., Rogatto S.R., Hier M., Kowalski L.P., Alaoui-Jamali M.A. Predominant Rab-GTPase amplicons contributing to oral squamous cell carcinoma progression to metastasis. Oncotarget. 2015;6:21950-21963.

    Not in our library10.18632/oncotarget.4277

  199. 199.

    Hanahan D., Weinberg R.A. Hallmarks of cancer: The next generation. Cell. 2011;144:646-674.

    Not in our library10.1016/j.cell.2011.02.013

  200. 200.

    Cairns R.A., Harris I.S., Mak T.W. Regulation of cancer cell metabolism. Nat. Rev. Cancer. 2011;11:85-95.

    Not in our library10.1038/nrc2981

  201. 201.

    Kimmelman A.C., White E. Autophagy and Tumor Metabolism. Cell Metab. 2017;25:1037-1043.

    Not in our library10.1016/j.cmet.2017.04.004

  202. 202.

    Pavlova N.N., Thompson C.B. The Emerging Hallmarks of Cancer Metabolism. Cell Metab. 2016;23:27-47.

    Not in our library10.1016/j.cmet.2015.12.006

  203. 203.

    Vander Heiden M.G., DeBerardinis R.J. Understanding the Intersections between Metabolism and Cancer Biology. Cell. 2017;168:657-669.

    Not in our library10.1016/j.cell.2016.12.039

  204. 204.

    Warburg O. On the origin of cancer cells. Science. 1956;123:309-314.

    Not in our library10.1126/science.123.3191.309

  205. 205.

    Semenza G.L. Hypoxia-inducible factor 1: Regulator of mitochondrial metabolism and mediator of ischemic preconditioning. Biochim. Et Biophys. Acta. 2011;1813:1263-1268.

    Not in our library10.1016/j.bbamcr.2010.08.006

  206. 206.

    Chourasia A.H., Tracy K., Frankenberger C., Boland M.L., Sharifi M.N., Drake L.E., Sachleben J.R., Asara J.M., Locasale J.W., Karczmar G.S., et al. Mitophagy defects arising from BNip3 loss promote mammary tumor progression to metastasis. EMBO Rep. 2015;16:1145-1163.

    Not in our library10.15252/embr.201540759

  207. 207.

    Lyons A., Coleman M., Riis S., Favre C., O’Flanagan C.H., Zhdanov A.V., Papkovsky D.B., Hursting S.D., O’Connor R. Insulin-like growth factor 1 signaling is essential for mitochondrial biogenesis and mitophagy in cancer cells. J. Biol. Chem. 2017;292:16983-16998.

    Not in our library10.1074/jbc.m117.792838

  208. 208.

    Agnihotri S., Golbourn B., Huang X., Remke M., Younger S., Cairns R.A., Chalil A., Smith C.A., Krumholtz S.L., Mackenzie D., et al. PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma. Cancer Res. 2016;76:4708-4719.

    Not in our library10.1158/0008-5472.can-15-3079

  209. 209.

    Chang H.W., Kim M.R., Lee H.J., Lee H.M., Kim G.C., Lee Y.S., Nam H.Y., Lee M., Jang H.J., Lee K.E., et al. p53/BNIP3-dependent mitophagy limits glycolytic shift in radioresistant cancer. Oncogene. 2019.

    Not in our library10.1038/s41388-019-0697-6

  210. 210.

    Zhang C., Lin M., Wu R., Wang X., Yang B., Levine A.J., Hu W., Feng Z. Parkin, a p53 target gene, mediates the role of p53 in glucose metabolism and the Warburg effect. Proc. Natl. Acad. Sci. USA. 2011;108:16259-16264.

    Not in our library10.1073/pnas.1113884108

  211. 211.

    Hoshino A., Ariyoshi M., Okawa Y., Kaimoto S., Uchihashi M., Fukai K., Iwai-Kanai E., Ikeda K., Ueyama T., Ogata T., et al. Inhibition of p53 preserves Parkin-mediated mitophagy and pancreatic beta-cell function in diabetes. Proc. Natl. Acad. Sci. USA. 2014;111:3116-3121.

    Not in our library10.1073/pnas.1318951111

  212. 212.

    Maes H., Van Eygen S., Krysko D.V., Vandenabeele P., Nys K., Rillaerts K., Garg A.D., Verfaillie T., Agostinis P. BNIP3 supports melanoma cell migration and vasculogenic mimicry by orchestrating the actin cytoskeleton. Cell Death Dis. 2014;5:e1127.

    Not in our library10.1038/cddis.2014.94

  213. 213.

    Kim J.W., Gao P., Liu Y.C., Semenza G.L., Dang C.V. Hypoxia-inducible factor 1 and dysregulated c-Myc cooperatively induce vascular endothelial growth factor and metabolic switches hexokinase 2 and pyruvate dehydrogenase kinase 1. Mol. Cell. Biol. 2007;27:7381-7393.

    Not in our library10.1128/mcb.00440-07

  214. 214.

    Dang C.V., Kim J.W., Gao P., Yustein J. The interplay between MYC and HIF in cancer. Nat. Rev. Cancer. 2008;8:51-56.

    Not in our library10.1038/nrc2274

  215. 215.

    Xiong J., Wang L., Fei X.C., Jiang X.F., Zheng Z., Zhao Y., Wang C.F., Li B., Chen S.J., Janin A., et al. MYC is a positive regulator of choline metabolism and impedes mitophagy-dependent necroptosis in diffuse large B-cell lymphoma. Blood Cancer J. 2017;7:e582.

    Not in our library10.1038/bcj.2017.61

  216. 216.

    Weinberg S.E., Chandel N.S. Targeting mitochondria metabolism for cancer therapy. Nat. Chem. Biol. 2015;11:9-15.

    Not in our library10.1038/nchembio.1712

  217. 217.

    Tan Z., Luo X., Xiao L., Tang M., Bode A.M., Dong Z., Cao Y. The Role of PGC1alpha in Cancer Metabolism and its Therapeutic Implications. Mol. Cancer Ther. 2016;15:774-782.

    Not in our library10.1158/1535-7163.mct-15-0621

  218. 218.

    Park J.H., Ko J., Park Y.S., Park J., Hwang J., Koh H.C. Clearance of Damaged Mitochondria Through PINK1 Stabilization by JNK and ERK MAPK Signaling in Chlorpyrifos-Treated Neuroblastoma Cells. Mol. Neurobiol. 2017;54:1844-1857.

    Not in our library10.1007/s12035-016-9753-1

  219. 219.

    Bazil J.N., Beard D.A., Vinnakota K.C. Catalytic Coupling of Oxidative Phosphorylation, ATP Demand, and Reactive Oxygen Species Generation. Biophys. J. 2016;110:962-971.

    Not in our library10.1016/j.bpj.2015.09.036

  220. 220.

    Starkov A.A. The role of mitochondria in reactive oxygen species metabolism and signaling. Ann. N. Y. Acad. Sci. 2008;1147:37-52.

    Not in our library10.1196/annals.1427.015

  221. 221.

    Melser S., Chatelain E.H., Lavie J., Mahfouf W., Jose C., Obre E., Goorden S., Priault M., Elgersma Y., Rezvani H.R., et al. Rheb regulates mitophagy induced by mitochondrial energetic status. Cell Metab. 2013;17:719-730.

    Not in our library10.1016/j.cmet.2013.03.014

  222. 222.

    Vara-Perez M., Maes H., Van Dingenen S., Agostinis P. BNIP3 contributes to the glutamine-driven aggressive behavior of melanoma cells. Biol. Chem. 2019;400:187-193.

    Not in our library10.1515/hsz-2018-0208

  223. 223.

    Guo J.Y., Karsli-Uzunbas G., Mathew R., Aisner S.C., Kamphorst J.J., Strohecker A.M., Chen G., Price S., Lu W., Teng X., et al. Autophagy suppresses progression of K-ras-induced lung tumors to oncocytomas and maintains lipid homeostasis. Genes Dev. 2013;27:1447-1461.

    Not in our library10.1101/gad.219642.113

  224. 224.

    Carracedo A., Cantley L.C., Pandolfi P.P. Cancer metabolism: Fatty acid oxidation in the limelight. Nat. Rev. Cancer. 2013;13:227-232.

    Not in our library10.1038/nrc3483

  225. 225.

    McDonnell E., Crown S.B., Fox D.B., Kitir B., Ilkayeva O.R., Olsen C.A., Grimsrud P.A., Hirschey M.D. Lipids Reprogram Metabolism to Become a Major Carbon Source for Histone Acetylation. Cell Rep. 2016;17:1463-1472.

    Not in our library10.1016/j.celrep.2016.10.012

  226. 226.

    Lin J., Handschin C., Spiegelman B.M. Metabolic control through the PGC-1 family of transcription coactivators. Cell Metab. 2005;1:361-370.

    Not in our library10.1016/j.cmet.2005.05.004

  227. 227.

    Du Q., Tan Z., Shi F., Tang M., Xie L., Zhao L., Li Y., Hu J., Zhou M., Bode A., et al. PGC1alpha/CEBPB/CPT1A axis promotes radiation resistance of nasopharyngeal carcinoma through activating fatty acid oxidation. Cancer Sci. 2019.

    Not in our library10.1111/cas.14011

  228. 228.
  229. 229.

    Mancias J.D., Kimmelman A.C. Mechanisms of Selective Autophagy in Normal Physiology and Cancer. J. Mol. Biol. 2016;428:1659-1680.

    Not in our library10.1016/j.jmb.2016.02.027

  230. 230.

    Cianfanelli V., Fuoco C., Lorente M., Salazar M., Quondamatteo F., Gherardini P.F., De Zio D., Nazio F., Antonioli M., D’Orazio M., et al. AMBRA1 links autophagy to cell proliferation and tumorigenesis by promoting c-Myc dephosphorylation and degradation. Nat. Cell Biol. 2015;17:706.

    Not in our library10.1038/ncb3171

  231. 231.

    Inoue S., Hao Z., Elia A.J., Cescon D., Zhou L., Silvester J., Snow B., Harris I.S., Sasaki M., Li W.Y., et al. Mule/Huwe1/Arf-BP1 suppresses Ras-driven tumorigenesis by preventing c-Myc/Miz1-mediated down-regulation of p21 and p15. Genes Dev. 2013;27:1101-1114.

    Not in our library10.1101/gad.214577.113

  232. 232.

    Strappazzon F., Cecconi F. AMBRA1-induced mitophagy: A new mechanism to cope with cancer? Mol. Cell Oncol. 2015;2:e975647.

    Not in our library10.4161/23723556.2014.975647

  233. 233.

    Lock R., Roy S., Kenific C.M., Su J.S., Salas E., Ronen S.M., Debnath J. Autophagy facilitates glycolysis during Ras-mediated oncogenic transformation. Mol. Biol. Cell. 2011;22:165-178.

    Not in our library10.1091/mbc.e10-06-0500

  234. 234.

    Guo J.Y., Chen H.Y., Mathew R., Fan J., Strohecker A.M., Karsli-Uzunbas G., Kamphorst J.J., Chen G., Lemons J.M., Karantza V., et al. Activated Ras requires autophagy to maintain oxidative metabolism and tumorigenesis. Genes Dev. 2011;25:460-470.

    Not in our library10.1101/gad.2016311

  235. 235.

    Strohecker A.M., Guo J.Y., Karsli-Uzunbas G., Price S.M., Chen G.J., Mathew R., McMahon M., White E. Autophagy sustains mitochondrial glutamine metabolism and growth of BrafV600E-driven lung tumors. Cancer Discov. 2013;3:1272-1285.

    Not in our library10.1158/2159-8290.cd-13-0397

  236. 236.

    Gargini R., Garcia-Escudero V., Izquierdo M., Wandosell F. Oncogene-mediated tumor transformation sensitizes cells to autophagy induction. Oncol. Rep. 2016;35:3689-3695.

    Not in our library10.3892/or.2016.4699

  237. 237.

    Huang X.Y., Li D., Chen Z.X., Huang Y.H., Gao W.Y., Zheng B.Y., Wang X.Z. Hepatitis B Virus X protein elevates Parkin-mediated mitophagy through Lon Peptidase in starvation. Exp. Cell Res. 2018;368:75-83.

    Not in our library10.1016/j.yexcr.2018.04.016

  238. 238.

    Poillet-Perez L., Xie X., Zhan L., Yang Y., Sharp D.W., Hu Z.S., Su X., Maganti A., Jiang C., Lu W., et al. Autophagy maintains tumour growth through circulating arginine. Nature. 2018;563:569-573.

    Not in our library10.1038/s41586-018-0697-7

  239. 239.

    Sousa C.M., Biancur D.E., Wang X., Halbrook C.J., Sherman M.H., Zhang L., Kremer D., Hwang R.F., Witkiewicz A.K., Ying H., et al. Pancreatic stellate cells support tumour metabolism through autophagic alanine secretion. Nature. 2016;536:479-483.

    Not in our library10.1038/nature19084

  240. 240.

    Wallace D.F. The Regulation of Iron Absorption and Homeostasis. Clin. Biochem. Rev. 2016;37:51-62.

    Not in our library

  241. 241.

    Shaw G.C., Cope J.J., Li L., Corson K., Hersey C., Ackermann G.E., Gwynn B., Lambert A.J., Wingert R.A., Traver D., et al. Mitoferrin is essential for erythroid iron assimilation. Nature. 2006;440:96-100.

    Not in our library10.1038/nature04512

  242. 242.

    Paradkar P.N., Zumbrennen K.B., Paw B.H., Ward D.M., Kaplan J. Regulation of mitochondrial iron import through differential turnover of mitoferrin 1 and mitoferrin 2. Mol. Cell. Biol. 2009;29:1007-1016.

    Not in our library10.1128/mcb.01685-08

  243. 243.

    Kang R., Xie Y., Zeh H.J., Klionsky D.J., Tang D. Mitochondrial quality control mediated by PINK1 and PRKN: Links to iron metabolism and tumor immunity. Autophagy. 2019;15:172-173.

    Not in our library10.1080/15548627.2018.1526611

  244. 244.

    Ziegler P.K., Bollrath J., Pallangyo C.K., Matsutani T., Canli O., De Oliveira T., Diamanti M.A., Muller N., Gamrekelashvili J., Putoczki T., et al. Mitophagy in Intestinal Epithelial Cells Triggers Adaptive Immunity during Tumorigenesis. Cell. 2018;174:88-101.

    Not in our library10.1016/j.cell.2018.05.028

  245. 245.

    Tsoi J., Robert L., Paraiso K., Galvan C., Sheu K.M., Lay J., Wong D.J.L., Atefi M., Shirazi R., Wang X., et al. Multi-stage Differentiation Defines Melanoma Subtypes with Differential Vulnerability to Drug-Induced Iron-Dependent Oxidative Stress. Cancer Cell. 2018;33:890-904.

    Not in our library10.1016/j.ccell.2018.03.017

  246. 246.

    Fessler E., Dijkgraaf F.E., De Sousa E.M.F., Medema J.P. Cancer stem cell dynamics in tumor progression and metastasis: Is the microenvironment to blame? Cancer Lett. 2013;341:97-104.

    Not in our library10.1016/j.canlet.2012.10.015

  247. 247.

    Liu K., Lee J., Kim J.Y., Wang L., Tian Y., Chan S.T., Cho C., Machida K., Chen D., Ou J.J. Mitophagy Controls the Activities of Tumor Suppressor p53 to Regulate Hepatic Cancer Stem Cells. Mol. Cell. 2017;68:281-292.

    Not in our library10.1016/j.molcel.2017.09.022

  248. 248.

    Lathia J.D., Liu H. Overview of Cancer Stem Cells and Stemness for Community Oncologists. Target Oncol. 2017;12:387-399.

    Not in our library10.1007/s11523-017-0508-3

  249. 249.

    Whelan K.A., Chandramouleeswaran P.M., Tanaka K., Natsuizaka M., Guha M., Srinivasan S., Darling D.S., Kita Y., Natsugoe S., Winkler J.D., et al. Autophagy supports generation of cells with high CD44 expression via modulation of oxidative stress and Parkin-mediated mitochondrial clearance. Oncogene. 2017;36:4843-4858.

    Not in our library10.1038/onc.2017.102

  250. 250.

    Ye X.Q., Li Q., Wang G.H., Sun F.F., Huang G.J., Bian X.W., Yu S.C., Qian G.S. Mitochondrial and energy metabolism-related properties as novel indicators of lung cancer stem cells. Int. J. Cancer. 2011;129:820-831.

    Not in our library10.1002/ijc.25944

  251. 251.

    Shen Y.A., Wang C.Y., Hsieh Y.T., Chen Y.J., Wei Y.H. Metabolic reprogramming orchestrates cancer stem cell properties in nasopharyngeal carcinoma. Cell Cycle. 2015;14:86-98.

    Not in our library10.4161/15384101.2014.974419

  252. 252.

    Davis C.H., Kim K.Y., Bushong E.A., Mills E.A., Boassa D., Shih T., Kinebuchi M., Phan S., Zhou Y., Bihlmeyer N.A., et al. Transcellular degradation of axonal mitochondria. Proc. Natl. Acad. Sci. USA. 2014;111:9633-9638.

    Not in our library10.1073/pnas.1404651111

  253. 253.

    Hayakawa K., Esposito E., Wang X., Terasaki Y., Liu Y., Xing C., Ji X., Lo E.H. Transfer of mitochondria from astrocytes to neurons after stroke. Nature. 2016;535:551-555.

    Not in our library10.1038/nature18928

  254. 254.

    Whitaker-Menezes D., Martinez-Outschoorn U.E., Flomenberg N., Birbe R.C., Witkiewicz A.K., Howell A., Pavlides S., Tsirigos A., Ertel A., Pestell R.G., et al. Hyperactivation of oxidative mitochondrial metabolism in epithelial cancer cells in situ: Visualizing the therapeutic effects of metformin in tumor tissue. Cell Cycle. 2011;10:4047-4064.

    Not in our library10.4161/cc.10.23.18151

  255. 255.
  256. 256.

    Osswald M., Jung E., Sahm F., Solecki G., Venkataramani V., Blaes J., Weil S., Horstmann H., Wiestler B., Syed M., et al. Brain tumour cells interconnect to a functional and resistant network. Nature. 2015;528:93-98.

    Not in our library10.1038/nature16071

  257. 257.

    Moschoi R., Imbert V., Nebout M., Chiche J., Mary D., Prebet T., Saland E., Castellano R., Pouyet L., Collette Y., et al. Protective mitochondrial transfer from bone marrow stromal cells to acute myeloid leukemic cells during chemotherapy. Blood. 2016;128:253-264.

    Not in our library10.1182/blood-2015-07-655860

  258. 258.

    Spees J.L., Olson S.D., Whitney M.J., Prockop D.J. Mitochondrial transfer between cells can rescue aerobic respiration. Proc. Natl. Acad. Sci. USA. 2006;103:1283-1288.

    Not in our library10.1073/pnas.0510511103

  259. 259.

    Islam M.N., Das S.R., Emin M.T., Wei M., Sun L., Westphalen K., Rowlands D.J., Quadri S.K., Bhattacharya S., Bhattacharya J. Mitochondrial transfer from bone-marrow-derived stromal cells to pulmonary alveoli protects against acute lung injury. Nat. Med. 2012;18:759-765.

    Not in our library10.1038/nm.2736

  260. 260.

    Marlein C.R., Zaitseva L., Piddock R.E., Robinson S.D., Edwards D.R., Shafat M.S., Zhou Z., Lawes M., Bowles K.M., Rushworth S.A. NADPH oxidase-2 derived superoxide drives mitochondrial transfer from bone marrow stromal cells to leukemic blasts. Blood. 2017;130:1649-1660.

    Not in our library10.1182/blood-2017-03-772939

  261. 261.
  262. 262.

    Feng Y., Zhu R., Shen J., Wu J., Lu W., Zhang J., Zhang J., Liu K. Human Bone Marrow Mesenchymal Stem Cells Rescue Endothelial Cells Experiencing Chemotherapy Stress by Mitochondrial Transfer Via Tunneling Nanotubes. Stem Cells Dev. 2019.

    Not in our library10.1089/scd.2018.0248

  263. 263.
  264. 264.
  265. 265.
  266. 266.

    Nzigou Mombo B., Gerbal-Chaloin S., Bokus A., Daujat-Chavanieu M., Jorgensen C., Hugnot J.P., Vignais M.L. MitoCeption: Transferring Isolated Human MSC Mitochondria to Glioblastoma Stem Cells. J. Vis. Exp.: JoVE. 2017.

    Not in our library10.3791/55245

  267. 267.
  268. 268.

    Hough K.P., Trevor J.L., Strenkowski J.G., Wang Y., Chacko B.K., Tousif S., Chanda D., Steele C., Antony V.B., Dokland T., et al. Exosomal transfer of mitochondria from airway myeloid-derived regulatory cells to T cells. Redox Biol. 2018;18:54-64.

    Not in our library10.1016/j.redox.2018.06.009

  269. 269.
  270. 270.
  271. 271.

    Tan A.S., Baty J.W., Dong L.F., Bezawork-Geleta A., Endaya B., Goodwin J., Bajzikova M., Kovarova J., Peterka M., Yan B., et al. Mitochondrial genome acquisition restores respiratory function and tumorigenic potential of cancer cells without mitochondrial DNA. Cell Metab. 2015;21:81-94.

    Not in our library10.1016/j.cmet.2014.12.003

  272. 272.

    Lou E., Zhai E., Sarkari A., Desir S., Wong P., Iizuka Y., Yang J., Subramanian S., McCarthy J., Bazzaro M., et al. Cellular and Molecular Networking Within the Ecosystem of Cancer Cell Communication via Tunneling Nanotubes. Front. Cell Dev. Biol. 2018;6:95.

    Not in our library10.3389/fcell.2018.00095

  273. 273.

    Patheja P., Sahu K. Macrophage conditioned medium induced cellular network formation in MCF-7 cells through enhanced tunneling nanotube formation and tunneling nanotube mediated release of viable cytoplasmic fragments. Exp. Cell Res. 2017;355:182-193.

    Not in our library10.1016/j.yexcr.2017.04.008

  274. 274.

    Ahmad T., Mukherjee S., Pattnaik B., Kumar M., Singh S., Kumar M., Rehman R., Tiwari B.K., Jha K.A., Barhanpurkar A.P., et al. Miro1 regulates intercellular mitochondrial transport & enhances mesenchymal stem cell rescue efficacy. EMBO J. 2014;33:994-1010.

    Not in our library10.1002/embj.201386030

  275. 275.
  276. 276.

    Roger A.J., Munoz-Gomez S.A., Kamikawa R. The Origin and Diversification of Mitochondria. Curr. Biol. 2017;27:R1177-R1192.

    Not in our library10.1016/j.cub.2017.09.015

  277. 277.
  278. 278.

    Franchi L., Eigenbrod T., Munoz-Planillo R., Nunez G. The inflammasome: A caspase-1-activation platform that regulates immune responses and disease pathogenesis. Nat. Immunol. 2009;10:241-247.

    Not in our library10.1038/ni.1703

  279. 279.

    Bhat N., Fitzgerald K.A. Recognition of cytosolic DNA by cGAS and other STING-dependent sensors. Eur. J. Immunol. 2014;44:634-640.

    Not in our library10.1002/eji.201344127

  280. 280.

    Quicke K.M., Diamond M.S., Suthar M.S. Negative regulators of the RIG-I-like receptor signaling pathway. Eur. J. Immunol. 2017;47:615-628.

    Not in our library10.1002/eji.201646484

  281. 281.

    Kwon D., Park E., Kang S.J. Stimulator of IFN genes-mediated DNA-sensing pathway is suppressed by NLRP3 agonists and regulated by mitofusin 1 and TBC1D15, mitochondrial dynamics mediators. FASEB J. 2017;31:4866-4878.

    Not in our library10.1096/fj.201700328r

  282. 282.

    Ishikawa H., Ma Z., Barber G.N. STING regulates intracellular DNA-mediated, type I interferon-dependent innate immunity. Nature. 2009;461:788-792.

    Not in our library10.1038/nature08476

  283. 283.

    Sassano M.L., van Vliet A.R., Agostinis P. Mitochondria-Associated Membranes As Networking Platforms and Regulators of Cancer Cell Fate. Front. Oncol. 2017;7:174.

    Not in our library10.3389/fonc.2017.00174

  284. 284.

    Gelmetti V., De Rosa P., Torosantucci L., Marini E.S., Romagnoli A., Di Rienzo M., Arena G., Vignone D., Fimia G.M., Valente E.M. PINK1 and BECN1 relocalize at mitochondria-associated membranes during mitophagy and promote ER-mitochondria tethering and autophagosome formation. Autophagy. 2017;13:654-669.

    Not in our library10.1080/15548627.2016.1277309

  285. 285.
  286. 286.

    Basso V., Marchesan E., Peggion C., Chakraborty J., von Stockum S., Giacomello M., Ottolini D., Debattisti V., Caicci F., Tasca E., et al. Regulation of ER-mitochondria contacts by Parkin via Mfn2. Pharmacol. Res. 2018;138:43-56.

    Not in our library10.1016/j.phrs.2018.09.006

  287. 287.

    Zhong Z., Umemura A., Sanchez-Lopez E., Liang S., Shalapour S., Wong J., He F., Boassa D., Perkins G., Ali S.R., et al. NF-kappaB Restricts Inflammasome Activation via Elimination of Damaged Mitochondria. Cell. 2016;164:896-910.

    Not in our library10.1016/j.cell.2015.12.057

  288. 288.

    Zhang N.P., Liu X.J., Xie L., Shen X.Z., Wu J. Impaired mitophagy triggers NLRP3 inflammasome activation during the progression from nonalcoholic fatty liver to nonalcoholic steatohepatitis. Lab. Investig. 2019.

    Not in our library10.1038/s41374-018-0177-6

  289. 289.

    Kim M.J., Bae S.H., Ryu J.C., Kwon Y., Oh J.H., Kwon J., Moon J.S., Kim K., Miyawaki A., Lee M.G., et al. SESN2/sestrin2 suppresses sepsis by inducing mitophagy and inhibiting NLRP3 activation in macrophages. Autophagy. 2016;12:1272-1291.

    Not in our library10.1080/15548627.2016.1183081

  290. 290.
  291. 291.

    Gomez-Cabanas L., Lopez-Cotarelo P., Criado-Garcia O., Murphy M.P., Boya P., Rodriguez-Fernandez J.L. Immunological Synapse Formation Induces Mitochondrial Clustering and Mitophagy in Dendritic Cells. J. Immunol. 2019;202:1715-1723.

    Not in our library10.4049/jimmunol.1800575

  292. 292.

    O’Sullivan T.E., Johnson L.R., Kang H.H., Sun J.C. BNIP3- and BNIP3L-Mediated Mitophagy Promotes the Generation of Natural Killer Cell Memory. Immunity. 2015;43:331-342.

    Not in our library10.1016/j.immuni.2015.07.012

  293. 293.

    Abdrakhmanov A., Kulikov A.V., Luchkina E.A., Zhivotovsky B., Gogvadze V. Involvement of mitophagy in cisplatin-induced cell death regulation. Biol. Chem. 2019;400:161-170.

    Not in our library10.1515/hsz-2018-0210

  294. 294.

    Wu H.M., Shao L.J., Jiang Z.F., Liu R.Y. Gemcitabine-Induced Autophagy Protects Human Lung Cancer Cells from Apoptotic Death. Lung. 2016;194:959-966.

    Not in our library10.1007/s00408-016-9936-6

  295. 295.

    Mackeh R., Perdiz D., Lorin S., Codogno P., Pous C. Autophagy and microtubules - new story, old players. J. Cell Sci. 2013;126:1071-1080.

    Not in our library10.1242/jcs.115626

  296. 296.

    Wei R., Cao J., Yao S. Matrine promotes liver cancer cell apoptosis by inhibiting mitophagy and PINK1/Parkin pathways. Cell Stress Chaperones. 2018;23:1295-1309.

    Not in our library10.1007/s12192-018-0937-7

  297. 297.

    Zheng R., Yao Q., Xie G., Du S., Ren C., Wang Y., Yuan Y. TAT-ODD-p53 enhances the radiosensitivity of hypoxic breast cancer cells by inhibiting Parkin-mediated mitophagy. Oncotarget. 2015;6:17417-17429.

    Not in our library10.18632/oncotarget.4002

  298. 298.

    Wang J., Fang Y., Yan L., Yuan N., Zhang S., Xu L., Nie M., Zhang X., Wang J. Erythroleukemia cells acquire an alternative mitophagy capability. Sci. Rep. 2016;6:24641.

    Not in our library10.1038/srep24641

  299. 299.

    MacKeigan J.P., Murphy L.O., Blenis J. Sensitized RNAi screen of human kinases and phosphatases identifies new regulators of apoptosis and chemoresistance. Nat. Cell Biol. 2005;7:591-600.

    Not in our library10.1038/ncb1258

  300. 300.

    Liu J., Chen Z., Guo J., Wang L., Liu X. Ambra1 induces autophagy and desensitizes human prostate cancer cells to cisplatin. Biosci. Rep. 2017.

    Not in our library10.1042/bsr20170770

  301. 301.

    Villa E., Proics E., Rubio-Patino C., Obba S., Zunino B., Bossowski J.P., Rozier R.M., Chiche J., Mondragon L., Riley J.S., et al. Parkin-Independent Mitophagy Controls Chemotherapeutic Response in Cancer Cells. Cell Rep. 2017;20:2846-2859.

    Not in our library10.1016/j.celrep.2017.08.087

  302. 302.

    Qian W., Wang J., Roginskaya V., McDermott L.A., Edwards R.P., Stolz D.B., Llambi F., Green D.R., Van Houten B. Novel combination of mitochondrial division inhibitor 1 (mdivi-1) and platinum agents produces synergistic pro-apoptotic effect in drug resistant tumor cells. Oncotarget. 2014;5:4180-4194.

    Not in our library10.18632/oncotarget.1944

  303. 303.
  304. 304.

    Cristofani R., Montagnani Marelli M., Cicardi M.E., Fontana F., Marzagalli M., Limonta P., Poletti A., Moretti R.M. Dual role of autophagy on docetaxel-sensitivity in prostate cancer cells. Cell Death Dis. 2018;9:889.

    Not in our library10.1038/s41419-018-0866-5

  305. 305.

    Kim T.W., Lee S.J., Park Y.J., Park S.Y., Oh B.M., Park Y.S., Kim B.Y., Lee Y.H., Cho H.J., Yoon S.R., et al. Opa-interacting protein 5 modulates docetaxel-induced cell death via regulation of mitophagy in gastric cancer. Tumour Biol.: J. Int. Soc. Oncodevelopmental Biol. Med. 2017;39:1010428317733985.

    Not in our library10.1177/1010428317733985

  306. 306.

    Yan C., Luo L., Guo C.Y., Goto S., Urata Y., Shao J.H., Li T.S. Doxorubicin-induced mitophagy contributes to drug resistance in cancer stem cells from HCT8 human colorectal cancer cells. Cancer Lett. 2017;388:34-42.

    Not in our library10.1016/j.canlet.2016.11.018

  307. 307.

    Boyle K.A., Van Wickle J., Hill R.B., Marchese A., Kalyanaraman B., Dwinell M.B. Mitochondria-targeted drugs stimulate mitophagy and abrogate colon cancer cell proliferation. J. Biol. Chem. 2018;293:14891-14904.

    Not in our library10.1074/jbc.ra117.001469

  308. 308.

    Vacchelli E., Ma Y., Baracco E.E., Sistigu A., Enot D.P., Pietrocola F., Yang H., Adjemian S., Chaba K., Semeraro M., et al. Chemotherapy-induced antitumor immunity requires formyl peptide receptor 1. Science. 2015;350:972-978.

    Not in our library10.1126/science.aad0779

  309. 309.
  310. 310.

    Naik P.P., Mukhopadhyay S., Panda P.K., Sinha N., Das C.K., Mishra R., Patil S., Bhutia S.K. Autophagy regulates cisplatin-induced stemness and chemoresistance via the upregulation of CD44, ABCB1 and ADAM17 in oral squamous cell carcinoma. Cell Prolif. 2018;51.

    Not in our library10.1111/cpr.12411

  311. 311.

    Takeda M., Koseki J., Takahashi H., Miyoshi N., Nishida N., Nishimura J., Hata T., Matsuda C., Mizushima T., Yamamoto H., et al. Disruption of Endolysosomal RAB5/7 Efficiently Eliminates Colorectal Cancer Stem Cells. Cancer Res. 2019;79:1426-1437.

    Not in our library10.1158/0008-5472.can-18-2192

  312. 312.

    Chang C.M., Lan K.L., Huang W.S., Lee Y.J., Lee T.W., Chang C.H., Chuang C.M. (188)Re-Liposome Can Induce Mitochondrial Autophagy and Reverse Drug Resistance for Ovarian Cancer: From Bench Evidence to Preliminary Clinical Proof-of-Concept. Int. J. Mol. Sci. 2017;18:903.

    Not in our library10.3390/ijms18050903

  313. 313.
  314. 314.
  315. 315.

    Yin J., Guo J., Zhang Q., Cui L., Zhang L., Zhang T., Zhao J., Li J., Middleton A., Carmichael P.L., et al. Doxorubicin-induced mitophagy and mitochondrial damage is associated with dysregulation of the PINK1/parkin pathway. Toxicol. Vitr.: Int. J. Publ. Assoc. BIBRA. 2018;51:1-10.

    Not in our library10.1016/j.tiv.2018.05.001

  316. 316.
  317. 317.

    Du Q., Zhu B., Zhai Q., Yu B. Sirt3 attenuates doxorubicin-induced cardiac hypertrophy and mitochondrial dysfunction via suppression of Bnip3. Am. J. Transl. Res. 2017;9:3360-3373.

    Not in our library

  318. 318.

    Warren S. The immediate causes of death in cancer. Am. J. Med. Sci. 1932;184:610-615.

    Not in our library10.1097/00000441-193211000-00002

  319. 319.

    Martin L., Birdsell L., Macdonald N., Reiman T., Clandinin M.T., McCargar L.J., Murphy R., Ghosh S., Sawyer M.B., Baracos V.E. Cancer cachexia in the age of obesity: Skeletal muscle depletion is a powerful prognostic factor, independent of body mass index. J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol. 2013;31:1539-1547.

    Not in our library10.1200/jco.2012.45.2722

  320. 320.

    Skipworth R.J., Stewart G.D., Dejong C.H., Preston T., Fearon K.C. Pathophysiology of cancer cachexia: Much more than host-tumour interaction? Clin. Nutr. 2007;26:667-676.

    Not in our library10.1016/j.clnu.2007.03.011

  321. 321.

    von Haehling S., Anker S.D. Prevalence, incidence and clinical impact of cachexia: Facts and numbers-update 2014. J. Cachexiasarcopenia Muscle. 2014;5:261-263.

    Not in our library10.1007/s13539-014-0164-8

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    Caillet P., Liuu E., Raynaud Simon A., Bonnefoy M., Guerin O., Berrut G., Lesourd B., Jeandel C., Ferry M., Rolland Y., et al. Association between cachexia, chemotherapy and outcomes in older cancer patients: A systematic review. Clin. Nutr. 2017;36:1473-1482.

    Not in our library10.1016/j.clnu.2016.12.003

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    Op den Kamp C.M., Langen R.C., Snepvangers F.J., de Theije C.C., Schellekens J.M., Laugs F., Dingemans A.M., Schols A.M. Nuclear transcription factor kappa B activation and protein turnover adaptations in skeletal muscle of patients with progressive stages of lung cancer cachexia. Am. J. Clin. Nutr. 2013;98:738-748.

    Not in our library10.3945/ajcn.113.058388

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    Penna F., Costamagna D., Pin F., Camperi A., Fanzani A., Chiarpotto E.M., Cavallini G., Bonelli G., Baccino F.M., Costelli P. Autophagic degradation contributes to muscle wasting in cancer cachexia. Am. J. Pathol. 2013;182:1367-1378.

    Not in our library10.1016/j.ajpath.2012.12.023

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    Manne N.D., Lima M., Enos R.T., Wehner P., Carson J.A., Blough E. Altered cardiac muscle mTOR regulation during the progression of cancer cachexia in the ApcMin/+ mouse. Int. J. Oncol. 2013;42:2134-2140.

    Not in our library10.3892/ijo.2013.1893

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    Stephens N.A., Gallagher I.J., Rooyackers O., Skipworth R.J., Tan B.H., Marstrand T., Ross J.A., Guttridge D.C., Lundell L., Fearon K.C., et al. Using transcriptomics to identify and validate novel biomarkers of human skeletal muscle cancer cachexia. Genome Med. 2010;2:1.

    Not in our library10.1186/gm122

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    Asp M.L., Tian M., Wendel A.A., Belury M.A. Evidence for the contribution of insulin resistance to the development of cachexia in tumor-bearing mice. Int. J. Cancer. 2010;126:756-763.

    Not in our library10.1002/ijc.24784

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    Feather C.E., Lees J.G., Makker P.G.S., Goldstein D., Kwok J.B., Moalem-Taylor G., Polly P. Oxaliplatin induces muscle loss and muscle-specific molecular changes in Mice. Muscle Nerve. 2018;57:650-658.

    Not in our library10.1002/mus.25966

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    Julienne C.M., Tardieu M., Chevalier S., Pinault M., Bougnoux P., Labarthe F., Couet C., Servais S., Dumas J.F. Cardiolipin content is involved in liver mitochondrial energy wasting associated with cancer-induced cachexia without the involvement of adenine nucleotide translocase. Biochim. Et Biophys. Acta. 2014;1842:726-733.

    Not in our library10.1016/j.bbadis.2014.02.003

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    Dumas J.F., Goupille C., Julienne C.M., Pinault M., Chevalier S., Bougnoux P., Servais S., Couet C. Efficiency of oxidative phosphorylation in liver mitochondria is decreased in a rat model of peritoneal carcinosis. J. Hepatol. 2011;54:320-327.

    Not in our library10.1016/j.jhep.2010.08.012

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    Tzika A.A., Fontes-Oliveira C.C., Shestov A.A., Constantinou C., Psychogios N., Righi V., Mintzopoulos D., Busquets S., Lopez-Soriano F.J., Milot S., et al. Skeletal muscle mitochondrial uncoupling in a murine cancer cachexia model. Int. J. Oncol. 2013;43:886-894.

    Not in our library10.3892/ijo.2013.1998

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    Bing C., Brown M., King P., Collins P., Tisdale M.J., Williams G. Increased gene expression of brown fat uncoupling protein (UCP)1 and skeletal muscle UCP2 and UCP3 in MAC16-induced cancer cachexia. Cancer Res. 2000;60:2405-2410.

    Not in our library

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    Lijie G., Yueyue Z., Nan Z., Ling W., Xuan W., Weijie Y. Mitsugumin 53 promotes mitochondrial autophagy through regulating Ambra1 expression in C2C12 myoblast cells. Cell Biol. Int. 2019;43:290-298.

    Not in our library10.1002/cbin.11097

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    Chen S.H., Jang G.M., Huttenhain R., Gordon D.E., Du D., Newton B.W., Johnson J.R., Hiatt J., Hultquist J.F., Johnson T.L., et al. CRL4(AMBRA1) targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling. EMBO J. 2018;37.

    Not in our library10.15252/embj.201797508

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    Zhao C., Chen Z., Qi J., Duan S., Huang Z., Zhang C., Wu L., Zeng M., Zhang B., Wang N., et al. Drp1-dependent mitophagy protects against cisplatin-induced apoptosis of renal tubular epithelial cells by improving mitochondrial function. Oncotarget. 2017;8:20988-21000.

    Not in our library10.18632/oncotarget.15470

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