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Microenvironment-Driven Dynamic Heterogeneity and Phenotypic Plasticity as a Mechanism of Melanoma Therapy Resistance

Farzana Ahmed, Nikolas K. Haass

Frontiers in Oncology · 2018 · Review

doi:10.3389/fonc.2018.00173

Abstract

Drug resistance constitutes a major challenge in designing melanoma therapies. Microenvironment-driven tumor heterogeneity and plasticity play a key role in this phenomenon. Melanoma is highly heterogeneous with diverse genomic alterations and expression of different biological markers. In addition, melanoma cells are highly plastic and capable of adapting quickly to changing microenvironmental conditions. These contribute to variations in therapy response and durability between individual melanoma patients. In response to changing microenvironmental conditions, like hypoxia and nutrient starvation, proliferative melanoma cells can switch to an invasive slow-cycling state. Cells in this state are more aggressive and metastatic, and show increased intrinsic drug resistance. During continuous treatment, slow-cycling cells are enriched within the tumor and give rise to a new proliferative subpopulation with increased drug resistance, by exerting their stem cell-like behavior and phenotypic plasticity. In melanoma, the proliferative and invasive states are defined by high and low MITF expression, respectively. It has been observed that in MITFhigh melanomas, inhibition of MITF increases the efficacy of targeted therapies and delays the acquisition of drug resistance. Contrarily, MITF is down-regulated in melanomas with acquired drug resistance. According to the phenotype switching theory, the gene expression profile of the MITFlow state is predominantly regulated by WNT5A, AXL and NF-κB signaling. Thus, different combinations of therapies should be effective in treating different phases of melanoma, such as the combination of targeted therapies with inhibitors of MITF expression during the initial treatment phase, but with inhibitors of WNT5A/AXL/NF-κB signaling during relapse.

Full text

From PubMed Central, U.S. National Library of Medicine, as current on Oct 24, 2026. Paragraph numbers are ours, so an answer can point at one.

Introduction

The development of targeted therapies for metastatic melanoma using small molecule MAPK pathway inhibitors (MAPKi) or immune checkpoint antagonists (ICi) has revolutionized dermatological oncology. However, first-generation MAPKi only works in approximately 35–50% of cases as a BRAFV600 mutation must be present. ICi show response rates of up to 60%, depending on drug or combination, and many of these are durable effects. Yet, drug resistance constitutes a major challenge for effective cancer treatment with melanoma being no exception. Rapid resistance to MAPKi is common and has also been reported for ICi. Although the molecular mechanisms leading to inherent and acquired drug resistance have been discussed extensively in the literature, the dynamics leading to resistance are poorly understood but yet critical to designing better treatments. Besides genetic and epigenetic factors, other contributors to drug resistance are microenvironment-driven tumor heterogeneity and plasticity.

Mechanisms of Intrinsic and Acquired Drug Resistance in Melanoma

Intrinsic refers to a pre-existent drug resistance of the entire population or a subpopulation of cancer cells before exposure to the drug. For example, intrinsically resistant cancer cells do not harbor the targeted mutation or are not dependent on the pathway inhibited by the drug. In the case of acquired drug resistance, the tumor responds initially to the treatment but relapses and progresses later. However, it is difficult to distinguish between intrinsic and acquired resistance as a small subpopulation of intrinsically resistant cancer cells subsequently enriched, may also explain initial response and later relapse. Causative factors that contribute to MAPKi resistance can be broadly classified into three categories: mutational events, non-mutational events, and changes in the surrounding microenvironment. Mutational and non-mutational events that contribute to the development of drug resistance have been discussed previously and are not the focus of this review. In brief, the mechanisms linked with these events predominantly lead to MAPK pathway reactivation and/or activation of parallel signaling pathways (e.g., PI3K/AKT/mTOR). Besides mutational and non-mutational events which are intrinsic to tumor cells, the tumor microenvironment contributes to the development of drug resistance by influencing the crosstalk between distinct cellular compartments. Solid tumors are comprised of tumor cells and stromal cells (e.g., fibroblasts, endothelial cells, and lymphocytes) that form an organ-like structure which is embedded within the extracellular matrix (ECM) and nourished by a vascular network. Each of these components show varying distribution within the tumor resulting in a highly complex and heterogeneous tumor microenvironment. In melanoma, secretion of tumor necrosis factor-α, hepatocyte growth factor (HGF), Wnt antagonist, sFRP2, and increased production of ECM by stromal cells in the tumor can cause resistance to MAPKi. Thus, the density of stromal cells in different parts of the tumor plays a key role in determining response and resistance to MAPKi. In addition, the distribution of the vasculature plays a crucial role in the acquisition of varying drug resistance mechanisms in different parts of the tumor, due to differences in the levels of nutrients and oxygen. Hypoxia can induce resistance to MAPKi by mediating upregulation of HGF/MET signaling, increasing SNAIL, and decreasing E-cadherin expression.

Tumor Heterogeneity and Plasticity

Tumor heterogeneity refers to the presence of subpopulations of cells that differ phenotypically and/or by biological behavior, either within a tumor (intra-tumoral) or between tumors of the same histopathological subtype within a patient (inter-tumoral) or between patients (inter-patient). Melanoma heterogeneity plays a key role in the response to MAPKi. At the molecular level, the features of different subpopulations are conferred by alterations of the genome, transcriptome, epigenome, and proteome. Melanoma is one of the most heterogeneous cancers, harboring diverse genomic alterations, including gain of function mutations (e.g., NRAS, BRAF, KIT, CDK4, and MITF), loss of function mutations (e.g., CDKN2A, PTEN, ARID2, and NF), and epigenetic changes (e.g., PTEN, CDKN2A, RAC1, and P53). In addition, various biological markers of melanoma (e.g., CD20, CD133, ABCB5, CD271, JARID1B, and ALDH1) show differential expression patterns in different regions within a tumor.

There are three tumor heterogeneity models. The well-accepted clonal evolution model refers to acquired additional genetic mutations in cancer cells that contribute to their altered phenotype and malignant potential. This results in a Darwinian-style selection of clones during disease progression. The stem cell model suggests that only a small fraction of tumor cells have the potential for maintaining the tumor and drive progression. These cancer stem cells have self-renewal capability and can be differentiated into “non-stem cancer cells” that lose their tumorigenic potential by acquiring stable epigenetic changes and occupy the largest fraction of the tumor. These two models are complementary to each other, rather than mutually exclusive. Their common feature is the unidirectional, irreversible nature of the molecular changes that lead to tumor heterogeneity. An alternative model is “phenotypic plasticity” or “phenotype switching.” This model suggests that tumor cells with different phenotypic and functional behavior can dynamically shift between different transcriptional programs. The different phenotypic states, described in terms of differential gene expression patterns, have been termed “proliferative” and “invasive” signatures. In this model, molecular changes resulting in tumor heterogeneity are reversible, unlike the clonal evolution and stem cell models. These changes are predominantly regulated by cues from the surrounding microenvironment, e.g., hypoxia, stroma-derived factors like HGF, TGF-β. For example, in response to hypoxia, proliferative melanoma cells can switch to the invasive phenotype by altering their gene expression profile.

Microenvironment-Driven Dynamic Heterogeneity in Melanoma

“Tumor microenvironment” is a broad term, which includes (1) the tumor stroma composed of fibroblasts, endothelial cells, immune cells, soluble molecules, and the ECM, (2) the epidermal microenvironment where the tumor had originated from, and (3) different subcompartments within the tumor itself. Interactions between tumor cells and the microenvironment contribute to the malignant behavior of tumor cells, e.g., progression, metastasis, angiogenesis, migration, and invasion. In addition, microenvironmental stress signals in response to nutrient starvation and inflammation drive phenotypic plasticity and invasion and determine therapeutic outcome. Similarly, a pre-existing immune-active tumor microenvironment is necessary for a favorable response to ipilimumab, and potentially other ICi.

We have developed a 3D melanoma spheroid model, which recapitulates the in vivo tumor microenvironment and architecture, that combined with the fluorescent ubiquitination-based cell cycle indicator is a useful tool to study the microenvironment in vitro. This model is being complemented constantly, e.g., by including DRAQ7 as a real-time cell death marker or by applying mathematical algorithms to predict spatial and temporal patterns of cell density and cell cycle. Due to an oxygen and nutrient gradient, melanoma spheroids segregate into a continuously proliferating subpopulation in the periphery and a G1-arrested subpopulation in the center. A similar phenomenon is observed in human melanoma xenografts in mice, where clusters of cycling cells are located near blood vessels and quiescent cells in central tumor zones. After isolating these two subpopulations from spheroids and plating them in 2D culture separately, within 24 h G1-arrested central cells recommence their cell cycle and become indistinguishable from the proliferating peripheral subpopulation. This supports the phenotypic plasticity model. The cell cycle phase can also contribute to drug sensitivity and can be targeted for cell cycle-tailored melanoma therapy. For example, bortezomib preferentially kills melanoma cells in the S/G2/M phase of the cell cycle. By contrast, cell cycle arrest can confer tolerance to drugs.

The Role of a Slow-Cycling Subpopulation in Melanoma Therapy Resistance

Although dysregulated proliferation is a hallmark of cancer, a quiescent or slow-cycling cell subpopulation is reported in many solid cancers, including melanoma. This slow-cycling subpopulation is a major determinant of treatment resistance to targeted therapies. Increased level of oxidative phosphorylation in slow cycling compared to normal cells contributes to drug resistance in many cancers including melanoma. MAPKi are predominantly effective in targeting rapidly proliferating cells, while the slow-cycling cells are not readily responsive to MAPKi. Thus, cells in the slow-cycling state or cells that switch to this state due to therapeutic stress, can evade the action of MAPKi.

Various mechanisms are utilized by this slow-cycling subpopulation to contribute to drug resistance. First, clonal expansion of the residual slow-cycling cells, that have survived initial treatment, results in their enrichment within the tumor. A recent study suggested that these slow-cycling cells are highly aggressive with increased metastatic potential. Second, the slow-cycling subpopulation also displays increased cancer stem cell-like behavior. Consistent with the stem cell theory, in melanoma, these slow-cycling cells comprise only 0.5–5% of all tumor cells with self-renewal potential and are defined by the expression of the H3K4 demethylase JARID1B. In addition, JARID1B-positive cells are essential for maintaining tumor growth. During continuous treatment, slow-cycling cells can gain the potential to differentiate into other cell types with an increased proliferation rate and drug resistance, subsequently resulting in relapse. The cells experience a high level of “therapeutic stress,” forcing them to employ several drug resistance mechanisms. Thus, overtime highly resistant drug tolerant cells are enriched within the tumor and contribute to the highly aggressive and drug resistant nature of metastatic melanoma after relapse. JARID1B-positive cells can give rise to JARID1B-negative cells and also vice versa. This supports the phenotype switching theory which indicates the plastic nature of tumor cells that is predominantly influenced by changing microenvironmental conditions (Figure 1). In addition to JARID1B, PGC1α defines another distinct slow-cycling state in melanoma with increased treatment resistance.

Taken together, slow-cycling cells play a pivotal role in developing therapy resistance and cancer progression. Thus, it is crucial to understand the underlying biology of the slow-cycling phenotype to improve the current therapy regimens in melanoma.

The Role of Microphthalmia-Associated Transcription Factor (MITF) in Melanoma Plasticity and Therapy Resistance

Microphthalmia-associated transcription factor is the master regulator of both normal melanocyte and melanoma biology. In melanoma, MITF acts as a molecular switch that determines whether the cell will differentiate, proliferate, or become quiescent with increased migratory behavior. The proliferative and invasive phenotypes of melanoma cells are defined by high and low levels of MITF, respectively, and melanoma cells are capable of switching between these two states, influenced by changing microenvironmental conditions.

Depletion of MITF can reduce proliferation through G1-arrest with increased expression of cancer stem cell markers. In response to hypoxia, MITF expression is downregulated. These properties are attributes of slow-cycling JARID1B-positive melanoma cells, supported by a negative correlation of MITF and JARID1B/SerpinE2. Thus, in response to stress, e.g., hypoxia and/or nutrient starvation, melanoma cells switch from a proliferative MITFhigh to an invasive MITFlow slow-cycling phenotype. However, these subpopulations are not mutually exclusive, as within a tumor there can be MITFhigh and MITFlow cells, reflecting tumor heterogeneity as discussed above. In contrast to the proliferative MITFhigh phenotype, the invasive MITFlow phenotype is mainly governed by receptor tyrosine kinases (e.g., AXL, EGFR, and ERB3), WNT5A or NF-κB signaling, and the BRN2–NFIB–EZH2 axis. Single cell expression analysis revealed that some MITFhigh cells also express the gene signature of the invasive MITFlow phenotype. These and other studies indicate the presence of a third subpopulation in melanoma that expresses MITF, AXL, and WNT5A simultaneously. Consistent with this, we showed by using a 3D melanoma spheroid model that indeed melanoma cells can proliferate and invade simultaneously. In addition, another study has shown that invasive MITFlow and poorly invasive MITFhigh cells cooperate to invade into the surrounding matrix.

The role of MITF in drug resistance is controversial and the underlying mechanisms are yet to be understood. For instance, the presence of MITF is a marker for responsiveness to MAPKi treatment, but when MITF expression is upregulated, it can confer resistance to MAPKi. This might reflect the extreme end of the MITF rheostat model defined by differentiation, slow cycling, high PGC1α expression, and therapy resistance. Augmenting MITF levels in melanoma cells should switch the invasive slow-cycling phenotype to a proliferative phenotype. This would increase drug sensitivity because MAPKi predominantly act on rapidly proliferating cells. In addition, over-expression of MITF will inhibit the switching of proliferative cells to the invasive slow-cycling phenotype in response to stress by maintaining MITF levels constant. However, MITF is also reported as a driver of melanoma progression and long-term MITF depletion induces senescence in melanoma cells and/or promotes apoptosis. Melanoma cells upregulate MITF expression to recover the loss of MAPK signaling upon exposure to MAPKi, enabling the cells to tolerate MAPKi. Downregulation of MITF increases the cytotoxic effects of MAPKi on melanoma cells and also reduces the acquisition of drug resistance. Upregulation of MITF has also been seen in several MAPKi acquired resistant cell lines. However, the same study reports that another population of resistant cell lines has lost MITF expression. MITF is downregulated in the acquired drug resistant phase and makes the cells more invasive. Thus, further investigation of these signaling pathways is required to determine in which combination these signaling pathways can be targeted along with the inhibition of MAPK signaling, to improve the outcomes of melanoma patients with disease relapse.

However, the situation appears to be even more complex, as in heterogeneous tumors MITFhigh and AXLhigh populations can co-exist. Nevertheless, it has been shown that these subpopulations benefit from endothelin-1 in the presence of MAPKi, as inhibiting endothelin-1 signaling can effectively inhibit the growth of such heterogeneous tumors. More comprehensive studies are required to determine how MITF expression levels are altered in relation to the tumor’s response to MAPKi during ongoing treatment. Combination of MITF inhibitors with MAPKi should improve the efficacy of MAPKi in treating phases with high MITF expression. On the contrary, inhibitors of WNT5A/AXL/NF-κB in combination with MAPKi should improve the efficacy of MAPKi in treating phases with low MITF expression (Figure 2). Indeed, targeting AXL and BRAF/MEK simultaneously in a patient-derived xenograft model confers an increased survival advantage to the mice compared to monotherapy with either AXL or combination therapy with BRAF/MEK inhibitors.

Conclusion

Tumor microenvironment-driven dynamic heterogeneity is a major determinant of drug resistance in melanoma. This is mainly exerted by regulating the level of the master regulator MITF which is the major determinant of the dynamic phenotypic states in melanoma. A moderate MITF level determines the proliferative state of melanoma which is readily targetable with MAPKi. Both low and extremely high MITF levels give rise to two distinct slow-cycling states of melanoma (e.g., MITFlow/JARID1B-positive and MITFhigh/PGC1α-positive) with increased oxidative phosphorylation that results in treatment resistance. Thus, targeting this slow-cycling subpopulation by modulating MITF levels can be a potential strategy to overcome drug resistance in melanoma. However, MITF biology is highly complex and the downstream effects of MITF are extremely diverse. In addition, mechanisms that regulate MITF expression and activity are also numerous. Thus, modulation of MITF expression and activity can have diverse effects on melanoma cell biology. Considering the dynamic expression of MITF in response to changing microenvironmental conditions at various phases of melanomagenesis, MITF levels can be considered as a predictive marker for a suitable therapy regimen for treating a particular melanoma phase. We have developed an in vitro 3D melanoma spheroid model that mimics dynamic tumor heterogeneity to study the biology of microenvironment-driven tumor heterogeneity and plasticity and as these dynamic changes are difficult, time-consuming, and expensive to study in vivo.

Author Contributions

NH and FA wrote the manuscript together.

Conflict of Interest Statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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    Minchinton AI Tannock IF. Drug penetration in solid tumours. Nat Rev Cancer (2006 ) 6:583–92.

    Not in our library10.1038/nrc1893

  63. 63.

    Haass NK Schumacher U. Melanoma never says die. Exp Dermatol (2014 ) 23:471–2.

    Not in our library10.1111/exd.12400

  64. 64.

    Haass NK Gabrielli B. Cell cycle-tailored targeting of metastatic melanoma: challenges and opportunities. Exp Dermatol (2017 ) 26:649–55.

    Not in our library10.1111/exd.13303

  65. 65.

    Mitchison TJ. The proliferation rate paradox in antimitotic chemotherapy. Mol Biol Cell (2012 ) 23:1–6.

    Not in our library10.1091/mbc.e10-04-0335

  66. 66.

    Hanahan D Weinberg RA The hallmarks of cancer. Cell (2000 ) 100:57–70.

    Not in our library10.1016/s0092-8674(00)81683-9

  67. 67.

    Hanahan D Weinberg RA Hallmarks of cancer: the next generation. Cell (2011 ) 144:646–74.

    Not in our library10.1016/j.cell.2011.02.013

  68. 68.

    Cheli Y Giuliano S Botton T Rocchi S Hofman V Hofman P MITF is the key molecular switch between mouse or human melanoma initiating cells and their differentiated progeny. Oncogene (2011 ) 30:2307–18.

    Not in our library10.1038/onc.2010.598

  69. 69.

    Roesch A Vultur A Bogeski I Wang H Zimmermann KM Speicher D Overcoming intrinsic multidrug resistance in melanoma by blocking the mitochondrial respiratory chain of slow-cycling JARID1B(high) cells. Cancer Cell (2013 ) 23:811–25.

    Not in our library10.1016/j.ccr.2013.05.003

  70. 70.

    Sun C Wang L Huang S Heynen GJ Prahallad A Robert C Reversible and adaptive resistance to BRAF(V600E) inhibition in melanoma. Nature (2014 ) 508:118–22.

    Not in our library10.1038/nature13121

  71. 71.

    Vazquez F Lim JH Chim H Bhalla K Girnun G Pierce K PGC1alpha expression defines a subset of human melanoma tumors with increased mitochondrial capacity and resistance to oxidative stress. Cancer Cell (2013 ) 23:287–301.

    Not in our library10.1016/j.ccr.2012.11.020

  72. 72.
  73. 73.

    Haq R Shoag J Andreu-Perez P Yokoyama S Edelman H Rowe GC Oncogenic BRAF regulates oxidative metabolism via PGC1alpha and MITF. Cancer Cell (2013 ) 23:302–15.

    Not in our library10.1016/j.ccr.2013.02.003

  74. 74.

    Viale A Corti D Draetta GF. Tumors and mitochondrial respiration: a neglected connection. Cancer Res (2015 ) 75:3685–6.

    Not in our library10.1158/0008-5472.can-15-0491

  75. 75.

    Moore N Houghton J Lyle S. Slow-cycling therapy-resistant cancer cells. Stem Cells Dev (2012 ) 21:1822–30.

    Not in our library10.1089/scd.2011.0477

  76. 76.

    Haferkamp S Borst A Adam C Becker TM Motschenbacher S Windhovel S Vemurafenib induces senescence features in melanoma cells. J Invest Dermatol (2013 ) 133:1601–9.

    Not in our library10.1038/jid.2013.6

  77. 77.

    Perego M Maurer M Wang JX Shaffer S Muller AC Parapatics K A slow-cycling subpopulation of melanoma cells with highly invasive properties. Oncogene (2018 ) 37:302–12.

    Not in our library10.1038/onc.2017.341

  78. 78.
  79. 79.

    Levy C Khaled M Fisher DE. MITF: master regulator of melanocyte development and melanoma oncogene. Trends Mol Med (2006 ) 12:406–14.

    Not in our library10.1016/j.molmed.2006.07.008

  80. 80.
  81. 81.

    Giuliano S Cheli Y Ohanna M Bonet C Beuret L Bille K Microphthalmia-associated transcription factor controls the DNA damage response and a lineage-specific senescence program in melanomas. Cancer Res (2010 ) 70:3813–22.

    Not in our library10.1158/0008-5472.can-09-2913

  82. 82.

    Goding CR Commentary. A picture of MITF in melanoma immortality. Oncogene (2011 ) 30:2304–6.

    Not in our library10.1038/onc.2010.641

  83. 83.

    Yajima I Kumasaka MY Thang ND Goto Y Takeda K Iida M Molecular network associated with MITF in skin melanoma development and progression. J Skin Cancer (2011 ) 2011:730170.

    Not in our library10.1155/2011/730170

  84. 84.

    Widmer DS Cheng PF Eichhoff OM Belloni BC Zipser MC Schlegel NC Systematic classification of melanoma cells by phenotype-specific gene expression mapping. Pigment Cell Melanoma Res (2012 ) 25:343–53.

    Not in our library10.1111/j.1755-148x.2012.00986.x

  85. 85.

    Du J Widlund HR Horstmann MA Ramaswamy S Ross K Huber WE Critical role of CDK2 for melanoma growth linked to its melanocyte-specific transcriptional regulation by MITF. Cancer Cell (2004 ) 6:565–76.

    Not in our library10.1016/j.ccr.2004.10.014

  86. 86.

    He S Li CG Slobbe L Glover A Marshall E Baguley BC PAX3 knockdown in metastatic melanoma cell lines does not reduce MITF expression. Melanoma Res (2011 ) 21:24–34.

    Not in our library10.1097/cmr.0b013e328341c7e0

  87. 87.

    Feige E Yokoyama S Levy C Khaled M Igras V Lin RJ Hypoxia-induced transcriptional repression of the melanoma-associated oncogene MITF. Proc Natl Acad Sci U S A (2011 ) 108:E924–33.

    Not in our library10.1073/pnas.1106351108

  88. 88.

    Konieczkowski DJ Johannessen CM Abudayyeh O Kim JW Cooper ZA Piris A A melanoma cell state distinction influences sensitivity to MAPK pathway inhibitors. Cancer Discov (2014 ) 4:816–27.

    Not in our library10.1158/2159-8290.cd-13-0424

  89. 89.

    Muller J Krijgsman O Tsoi J Robert L Hugo W Song C Low MITF/AXL ratio predicts early resistance to multiple targeted drugs in melanoma. Nat Commun (2014 ) 5:5712.

    Not in our library10.1038/ncomms6712

  90. 90.

    Fane ME Chhabra Y Hollingsworth DE Simmons JL Spoerri L Oh TG NFIB mediates BRN2 driven melanoma cell migration and invasion through regulation of EZH2 and MITF. EBioMedicine (2017 ) 16:63–75.

    Not in our library10.1016/j.ebiom.2017.01.013

  91. 91.

    Ennen M Keime C Kobi D Mengus G Lipsker D Thibault-Carpentier C Single-cell gene expression signatures reveal melanoma cell heterogeneity. Oncogene (2015 ) 34:3251–63.

    Not in our library10.1038/onc.2014.262

  92. 92.

    Ennen M Keime C Gambi G Kieny A Coassolo S Thibault-Carpentier C MITF-High and MITF-low cells and a novel subpopulation expressing genes of both cell states contribute to intra- and intertumoral heterogeneity of primary melanoma. Clin Cancer Res (2017 ) 23:7097–107.

    Not in our library10.1158/1078-0432.ccr-17-0010

  93. 93.

    Dissanayake SK Olkhanud PB O’connell MP Carter A French AD Camilli TC Wnt5A regulates expression of tumor-associated antigens in melanoma via changes in signal transducers and activators of transcription 3 phosphorylation. Cancer Res (2008 ) 68:10205–14.

    Not in our library10.1158/0008-5472.can-08-2149

  94. 94.
  95. 95.
  96. 96.

    Arozarena I Wellbrock C. Overcoming resistance to BRAF inhibitors. Ann Transl Med (2017 ) 5:387.

    Not in our library10.21037/atm.2017.06.09

  97. 97.

    Garraway LA Widlund HR Rubin MA Getz G Berger AJ Ramaswamy S Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma. Nature (2005 ) 436:117–22.

    Not in our library10.1038/nature03664

  98. 98.

    Regad T. Molecular and cellular pathogenesis of melanoma initiation and progression. Cell Mol Life Sci (2013 ) 70:4055–65.

    Not in our library10.1007/s00018-013-1324-2

  99. 99.

    Kumar SM Dai J Li S Yang R Yu H Nathanson KL Human skin neural crest progenitor cells are susceptible to BRAF(V600E)-induced transformation. Oncogene (2014 ) 33:832–41.

    Not in our library10.1038/onc.2012.642

  100. 100.

    McGill GG Haq R Nishimura EK Fisher DE. c-Met expression is regulated by MITF in the melanocyte lineage. J Biol Chem (2006 ) 281:10365–73.

    Not in our library10.1074/jbc.m513094200

  101. 101.
  102. 102.
  103. 103.

    Smith MP Ferguson J Arozarena I Hayward R Marais R Chapman A Effect of SMURF2 targeting on susceptibility to MEK inhibitors in melanoma. J Natl Cancer Inst (2013 ) 105:33–46.

    Not in our library10.1093/jnci/djs471

  104. 104.

    Arozarena I Smith MP Wellbrock C Targeting MITF in the tolerance-phase. Oncotarget (2016 ) 7:54094–5.

    Not in our library10.18632/oncotarget.9423

  105. 105.

    Smith MP Rowling EJ Miskolczi Z Ferguson J Spoerri L Haass NK Targeting endothelin receptor signalling overcomes heterogeneity driven therapy failure. EMBO Mol Med (2017 ) 9:1011–29.

    Not in our library10.15252/emmm.201607156

  106. 106.

    Boshuizen J Koopman LA Krijgsman O Shahrabi A Van Den Heuvel EG Ligtenberg MA Cooperative targeting of melanoma heterogeneity with an AXL antibody-drug conjugate and BRAF/MEK inhibitors. Nat Med (2018 ) 24:203–12.

    Not in our library10.1038/nm.4472

  107. 107.

    Cheli Y Ohanna M Ballotti R Bertolotto C. Fifteen-year quest for microphthalmia-associated transcription factor target genes. Pigment Cell Melanoma Res (2010 ) 23:27–40.

    Not in our library10.1111/j.1755-148x.2009.00653.x

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