Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country
Lishuang Shen, Jennifer Dien Bard, Jennifer Dien Bard and 6 more
Frontiers in Microbiology · 2020
doi:10.3389/fmicb.2020.573430 (opens in a new tab)
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Abstract
Genomic analysis of SARS-CoV-2 sequences is crucial in determining the effectiveness of prudent safer at home measures in the United States (US). By haplotype analysis of 6,356 US isolates, we identified a pattern of strongly localized outbreaks at the city-, state-, and country-levels, and temporal transmissions. This points to the effectiveness of existing travel restriction policies and public health measures in reducing the transmission of SARS-CoV-2.
Abstract licence: CC BY
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