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The biosynthesis of pyoverdines
Michael T. Ringel, Thomas Brüser
Microbial Cell · 2018 · Review
Abstract
. Many distinct pyoverdines have been identified, all of which have a dihydroxyquinoline fluorophore in common, derived from oxidative cyclizations of non-ribosomal peptides. These serve as precursor of pyoverdines and are commonly known as ferribactins. Ferribactins of distinct species or even strains often differ in their sequence, resulting in a large variety of pyoverdines. However, synthesis of all ferribactins begins with an L-Glu/D-Tyr/L-Dab sequence, and the fluorophore is generated from the D-Tyr/L-Dab residues. In addition, the initial L-Glu residue is modified to various acids and amides that are responsible for the range of distinguishable pyoverdines in individual strains. While ferribactin synthesis is a cytoplasmic process, the maturation to the fluorescent pyoverdine as well as the tailoring of the initial glutamate are exclusively periplasmic processes that have been a mystery until recently. Here we review the current knowledge of pyoverdine biosynthesis with a focus on the recent advancements regarding the periplasmic maturation and tailoring reactions.
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From PubMed Central, U.S. National Library of Medicine, as current on Oct 26, 2026. Paragraph numbers are ours, so an answer can point at one.
A BRIEF HISTORY OF PYOVERDINE RESEARCH
In 1892, Gessard discovered yellow-green fluorescent pigments of bacterial origin that he termed fluorescins. These pigments, which later have been renamed pyoverdines by Turfreijer, could be discolored by acidification, and they recovered their color upon neutralization. It was proposed by Turfitt in 1936 that the ability to produce these green pigments may be used for classification purposes. Pyoverdine-producing bacteria are known today to belong to the genus Pseudomonas and form a subgroup therein, referred to as “fluorescent pseudomonads”. Pyoverdines from various strains have also been termed “pseudobactins”, beginning with a publication that introduced this term based on claimed but not further detailed chemical and physical differences to known siderophores. Subsequent structural analyses did not reveal any distinguishing characteristics to pyoverdines. In fact, the “pseudobactin” structure was the first solved structure of a pyoverdine, but the name pseudobactin still occasionally occurs in literature.
First functional insights were based on studies by King and coworkers who described in 1948 the induction of fluorescin (= pyoverdine) production by P. aeruginosa under iron limitation. Totter and Moseley found in 1952 that the production is inversely correlated with the logarithm of the iron concentration over a wide range. It took 26 years, until the next major progresses regarding pyoverdine function were made. In 1978, Meyer and coworkers first determined the extremely high affinity of pyoverdine to iron that is in the range of 1032, before they finally revealed the function of pyoverdine in iron uptake. It was concluded that pyoverdines are siderophores, which are iron-binding chelators involved in iron-transport into the cell. In agreement with this function, it later turned out that the production of pyoverdines is tightly regulated in response to iron by the regulator Fur. This review focuses on the biosynthesis and secretion of pyoverdines as summarized in Figure 1. For a more detailed summary on the discovery and earlier studies of pyoverdines, the reader is referred to an earlier excellent review.
CYTOPLASMIC INITIATION OF PYOVERDINE BIOGENESIS
The elucidation of the first pyoverdine structure led to a new era in pyoverdine research that focused on the biosynthesis. Pyoverdines (Figure 2A) are generally composed of i) a characteristic 2,3-diamino-6,7-dihydroxyquinoline fluorophore, ii) a variable acyl side chain attached to the 3-amino group of the fluorophore, and iii) a strain-specific peptide backbone, usually bound to the C1-carboxyl group of the ring system (reviewed in ), although so called isopyoverdines exist that have the peptide backbone attached to the C3-carboxyl group. The strain-specific peptide backbone varies in its sequence and can either be linear or (partially) intramolecularly cyclized. Furthermore, it can contain a number of unusual amino acids, such as β-hydroxy aspartic acid, β-hydroxy histidine, ornithine, cyclo-N5-hydroxy ornithine, N5-formyl-N5-hydroxy ornithine, N5-acetyl-N5-hydroxy ornithine and N5-hydroxybutyryl-N5-hydroxy ornithine, of which the hydroxamates or β-hydroxy carboxylates contribute to iron-chelation. Additionally, the amino acids in the peptide backbone may also be isomerized to the D-enantiomeric form.
Pyoverdine biogenesis starts in the cytoplasm, where non-ribosomal peptide synthetases (NRPSs) such as PvdL, PvdI and PvdD (depending on the strain) assemble an initially acylated ferribactin, the peptide precursor for pyoverdines. NRPSs are modular enzymes that add specific amino acids, one per module, to a growing peptide. Each module first adenylates its cognate amino acid at an adenylation domain and transfers it to a free thiol of a covalently bound phosphopantetheine cofactor. The peptide bonds are formed at condensation domains of the modules, thereby transferring growing peptides onto the phosphopantetheine-bound amino acid of the next module. Additional tayloring reactions and epimerizations can be catalyzed by specific domains. Finally, a thioesterase must cleave the thioester bond to release the peptide from the phosphopantetheine cofactor of the last module. Module 1 of PvdL incorporates either a myristic- or myristoleic acid side-chain instead of an amino acid as first building block, which is why ferribactin is acylated on the free amino group of the first incorporated amino acid. The first three amino acids of ferribactins, which are also incorporated by PvdL, are always L-glutamic acid (L-Glu), coupled via its γ-carboxy group to D-tyrosine (D-Tyr) and L-2,4-diaminobutyrate (L-Dab). This is important as the characteristic chromophore is derived from the D-Tyr and L-Dab residues, and we will later see that also the L-Glu residue at the N-terminus seems to be important, as several enzymes are produced that modify this residue.
The unusual amino acids in ferribactin are synthesized by pyoverdine-specific biosynthetic enzymes. L-Dab is produced by PvdH from L-aspartate β-semialdehyde (L-ASA), whilst L-N5-formyl-N5-hydroxy ornithine (L-fOHOrn) is produced in two steps from L-ornithin by PvdA-dependent hydroxylation and PvdF-dependent formylation. It has been proposed that all these enzymes, together with the NRPSs, may form a membrane associated complex termed “siderosome”, which could circumvent cytoplasmic toxicity.
Beside these enzymes, a small MbtH like protein has also been found to be associated with NRPSs of cytoplasmic ferribactin synthesis. The structure of this protein from P. aeruginosa has been solved and it was demonstrated to play a role in pyoverdine production or secretion. MbtH proteins have been shown to enhance the activity of NRPS adenylation domains to a variable extent, but the specific function of the MbtH like protein in ferribactin biosynthesis is unclear. Also, a soluble thioesterase PvdG has been implied to be involved in pyoverdine production. The corresponding gene pvdG is organized together with pvdL, and an interposon mutagenesis of pvdG abolished pyoverdine production. As only the last NRPSs of ferribactin synthesis, PvdD, has been shown to possess its own thioesterase active site motif, it may be that PvdG provides that functionality in trans for PvdL and possibly also for PvdI (Figure 1). PvdG might have overlapping function with a potential second soluble thioesterase (PA2411), which could explain why its genetic inactivation did not abolish pyoverdine production. In specific strains, further auxiliary enzymes can be involved in cytoplasmic ferribactin biosynthesis steps. For example, there exist P. aeruginosa strains that produce a pyoverdine with an N-hydroxy-cyclo-ornithine residue, the so-called type-II pyoverdine, and a specific acylationprotein, PvdYII, is responsible for this. It is believed that most likely an acetylation of N-hydroxy-ornithine is required for the cyclization at some stage before the peptide is released from the NRPS.
Transport of the ferribactin precursor - some questions remain
The acylated ferribactin is most likely immediately translocated across the cytoplasmic membrane into the periplasm by the ABC transporter PvdE. The best evidence for this role comes from genetic studies that demonstrated abolished pyoverdine secretion in a PvdE interposon deletion mutant of strain P. aeruginosa PAO1, and the complementation of this phenotype by expression of the pvdE gene. Notably, that study showed that the pvdE mutant also did not display any periplasmic pyoverdine fluorescence anymore, indicating that PvdE must interfere with a step prior to fluorophore formation, which could well be ferribactin transport. A potential role in transport of the pyoverdine precursor has also been suggested in bioinformatic studies, that categorized PvdE to a class of ABC transporters for modified cyclic peptides. Interestingly, two older experimental studies had already inactivated the pvdE gene with somewhat different results. The inactivation of pvdE in P. aeruginosa OT11 resulted in complete absence of pyoverdine in culture supernatants, whereas a transposon mutagenesis study identified four clones of strain PAO1 MT1 with inactivating insertions in pvdE that all showed a specific lower fluorescence in the culture supernatant. However, this fluorescence was not acid-quenchable and thus the compound was not pyoverdine. Instead it was speculated to represent a precursor of pyoverdine or a degradation product. A transport of acylated ferribactin by PvdE has not yet been demonstrated in vitro, and the absence of fluorescence in the periplasm might certainly also have other reasons, albeit the transporter function is definitively the most likely scenario.
Deacylation of the ferribactin precursor - quorum signaling meets pyoverdine production
In the periplasm, the acylation of ferribactin is removed by the Ntn-type hydrolase PvdQ. This now established function was first proposed by Visca et al.. PvdQ was initially discovered as quorum-quenching enzyme, which acts by deacylating the autoinducer N-(3-oxododecanoyl)-L-homoserine lactone (3-Oxo-C12-HSL) by hydrolysis of its amide bond. The enzyme is produced as a proenzyme that autoproteolytically cleaves itself in the periplasm by excising a 23-residue spacer forming an 18 kDa α-chain and a 60 kDa β-chain, which reassociate to form a functional heterodimer. It is an interesting aspect that pathways of quorum sensing and pyoverdine production converge in PvdQ, which is a true bifunctional enzyme. The function of PvdQ in quorum sensing of P. aeruginosa is believed to alter the ratio between the two autoinducers found in this species, namely the PvdQ substrate 3-Oxo-C12-HSL and the short-chain autoinducer N-butanoyl-L-homoserine lactone (C4-HSL), which is believed to specifically adapt gene expression to specific host environments. C4-HSL is not a substrate of PvdQ. A good example for effects of an altered ratio between the two autoinducers may be the effect of markedly reduced pyocyanine production in response to reduced 3-Oxo-C12-HSL levels. Pyocyanine generates oxidative stress and harms host organs. It thus might not be coincidental that pyoverdine production, which depends on the presence of PvdQ, is coupled with a reduction of host-threatening virulence: Both may serve to establish a permanent stable habitat in the host. A phenotypic analysis of a pvdQ deletion mutant of P. aeruginosa strain PAO1 indicated that PvdQ is required for swarming, biofilm formation and virulence. While the swarming and virulence phenotypes could be attributed to the absence of pyoverdine, the biofilm defect could not be suppressed by external addition of pyoverdine and thus may relate to quorum sensing. Interestingly, the production of PvdQ is tightly regulated and induced under iron-limiting conditions, which is another support for the idea that the effects of PvdQ on quorum sensing are specifically required when pyoverdines are produced. It would be good to know why all ferribactins initially need to be acylated and deacylated again after transport. One reason could be a membrane attachment that could help to anchor the precursor compound at the cytoplasmic membrane, which may improve the efficiency of the synthesis at clustered siderosomes or help to avoid its diffusion into the cytoplasm and thereby could guarantee its efficient transport. Another reason could be some mechanistic requirement for the transport system. A third reason may simply be the introduction of a biogenesis step that is controlled by an enzyme, which coordinates pyoverdine production with quorum sensing and virulence. As PvdQ influences the adaptation of fluorescent pseudomonads to host environments, it has been considered as target for inhibitors that hopefully may help to reduce the ability to thrive in hosts by blocking pyoverdine synthesis. After having solved the structure of PvdQ from P. aeruginosa, researchers succeeded in identifying such inhibitors, which were capable to inhibit growth of P. aeruginosa under iron-limiting conditions.
Periplasmic formation of the fluorophore - the central roles of PvdP and PvdO
After ferribactin is deacylated, the fluorescent dihydroxyquinoline ring system is generated, which transforms the ferribactin into a pyoverdine. This ring system is strictly conserved in pyoverdines and provides a planar scaffold for two oxo-ligands of the siderophore. As mentioned before, ferribactin is always synthesized with the three N-terminal residues L-Glu/D-Tyr/L-Dab, and the tyrosine and diaminobutyrate residues of these form the fluorophore. In ferribactin, L-Dab 4-amino group is condensed with the carbonyl group of the neighboring D-Tyr (Figure 2B). An oxidative cyclization cascade as proposed by Dorrestein et al. likely results in the formation of the three-ring fluorophore (Figure 2C). In that oxidative cyclization cascade, the tyrosine side chain is first hydroxylated to form a catechol that is then oxidized to an o-quinone. This facilitates the intramolecular addition, involving the 1-amino nitrogen atom from the neighboring L-Dab cycle and the quinone ring, resulting after tautomerization in the dihydro-dihydroxyquinoline system of dihydropyoverdine. The initial hydroxylation and oxidation steps are catalyzed by the copper-containing tyrosinase PvdP, which thereby also promotes the cyclization and formation of the dihydropyoverdine. This study observed a completion of the fluorescent fluorophore in the in vitro PvdP activity assays and suggested that PvdP is responsible for the complete fluorophore formation, which contrasted earlier studies that proposed the existence of an iron-enzyme-catalyzed oxidation of dihydropyoverdine. Also the detection of secreted dihydropyoverdine in a Pseudomonas strain supported the view that a single enzyme does not catalyze the complete conversion of ferribactin to the final fluorophore. Indeed, a rapid autoxidation can in principle complete the fluorophore under alkaline conditions, but recent studies demonstrated that this does not occur under weakly acidic physiological conditions, as found in the periplasmic space. It could be shown that a mutant strain lacking the putative oxidoreductase PvdO produced the dihydropyoverdines, indicating that PvdP catalyzes only the initial hydroxylation and first oxidation, whereas the final oxidation depends on PvdO. PvdO as purified from a heterologous Escherichia coli system did not contain a detectable cofactor and was inactive. It remains to be clarified whether active PvdO can be obtained that carries out the second oxidation alone, or whether it needs to associate with other components, such as specific electron transport systems or possibly the enzyme PvdP. Importantly, PvdO and PvdP always occur together, and currently both seem to be the only enzymes that are directly involved in the formation of the pyoverdine fluorophore.
As alternative to the above described oxidative cyclization cascade, a mechanism has been postulated based on the observation of a trihydroxylated “pseudoverdin” that was produced by a pyoverdine deficient mutant of P. aeruginosa PAO1, which was complemented by a cosmid gene bank clone to re-established fluorescence. The trihydroxylated “pseudoverdin” in that strain was not functional in iron acquisition and it was essentially an artificial system with unidentified genetic elements, but the resulting structure could permit an intramolecular Bucherer reaction as basis for the ring formation. Based on the identification of dihydropyoverdine-7-sulfonic acids, it was also proposed that a sulfonation can occur to facilitate this intramolecular Bucherer reaction. However, sulfonated dihydropyoverdines appear to be very lowly abundant and they might represent adducts of media constituents to the reactive dihydropyoverdine. As the conversion of dihydropyoverdine to pyoverdine most likely requires only one further enzyme, PvdO, and as the pvdO mutant did not accumulate a sulfonated dihydropyoverdine, we think that the Bucherer pathway is unlikely to be realized in this biosynthesis.
The electron transport pathways that are involved in the oxidation reactions are of fundamental importance and have not yet been clarified. Most relevant in this respect are studies with P. fluorescens ATCC17400, which show that the periplasmic membrane-associated oxidoreductase CcmC is involved. CcmC is well-known for its role as hemochaperone in periplasmic c-type cytochrome biogenesis, but it does not seem to be the cytochrome biogenesis role of CcmC that is relevant for its pyoverdine-related role. A very interesting mutagenesis study could dissect both functions of CcmC, indicating that distinct regions of this protein are involved in the two processes. The inactivation of CcmC has been described to reduce the level of thiol-oxidation in the periplasm, suggesting that oxidized thiols or more generally the oxidation-power in the periplasm may be relevant for pyoverdine formation. In this context, it is interesting that the addition of cysteine to the growing ccmC mutant culture resulted in formation of ferribactin. As it is now clear that PvdP is responsible for the conversion of ferribactin to dihydropyoverdine, it is likely that electrons must be transferred from PvdP to a periplasmic redox active compound that requires CcmC functionality.
The side chain modifications - surprising periplasmicreactions catalyzed by PvdN and PtaA
While the conservation of the residues D-Tyr/L-Dab at positions 2 and 3 in all ferribactins is required for fluorophore biosynthesis, the conservation of the L-Glu at position 1 in ferribactins is not that easy rationalized. This acidic residue forms an amide bond via its γ-carboxylic group to D-Tyr and thus possesses free α-carboxy and α-amino groups. Importantly, mature pyoverdines usually do not contain these residues any more. Instead, depending on the strain analyzed, they usually possess a succinamide, succinate or α-ketoglutarate at this position, and sometimes malamide and malic acid are found, or even traces of intramolecular cyclized succinic acid (Figure 3). P. aeruginosa, for example, converts the glutamate completely to succinamide, succinate or α-ketoglutarate. It is unknown, why these modifications are made, but it has been speculated that they could play a role under specific environmental conditions or niches that could so far not be mimicked in pure cultures under laboratory conditions.
Until recently, no enzyme could be identified as being responsible for these “tailoring” modifications. The reason for this was the fact that the candidate proteins, the functionally uncharacterized periplasmic enzymes encoded in pyoverdine biosynthesis gene clusters, were believed to be essential for pyoverdine formation. Three of these periplasmic enzymes, PvdM, PvdN, and PvdO, are usually encoded in an operon. Interposon mutagenesis of the corresponding genes in P. aeruginosa indicated essential roles of these genes in pyoverdine biosynthesis, although it was already noted in the first of these studies that complementation analyses were required to exclude polar effects in the pvdMNO operon. In recent studies that used in frame deletions and complementations in P. fluorescens strain A506, which produces the same pyoverdine modifications as P. aeruginosa, it turned out that only the first gene in this operon is indeed essential, whereas PvdO is not essential, being responsible only for the final oxidation step of the fluorophore (see above), and the absence of PvdN resulted only in abolished formation of succinamide and succinic acid. This study therefore revealed the first tailoring enzyme for the periplasmic glutamic acid modification. PvdN is an interesting enzyme for two reasons: (i) It is a PLP-containing enzyme that catalyzes a new PLP-dependent reaction mechanism, a decarboxylation under retention of an amino group at the α-carbon atom, and (ii) it is transported by the twin-arginine translocation system as folded protein that requires cytoplasmic PLP binding to be transport competent. When the active site lysine is mutated, PvdN remains stuck in the membrane, most likely due to transport-incompatible, unfolded hydrophobic regions. As PvdN catalyzes the direct formation of succinamide from glutamate and is also required for the occurrence of succinate that is most likely the spontaneous hydrolysis product of succinamide, the formation of α-ketoglutarate from glutamate requires another enzyme, which recently turned out to be a novel PLP-containing transaminase, termed PtaA for “periplasmic transaminase A”. PtaA is usually encoded outside the large pyoverdine gene clusters, but an interesting exception has been recognized (P. putida H8234) where its gene substitutes the gene encoding PvdN. There are pyoverdine-producing pseudomonads that have both enzymes, PvdN and PtaA, some have only PvdN, and others only PtaA. Consequently, some strains produce the products of both biosynthesis branches, whereas others produce only products of one or the other branch.
PtaA is a “normal” PLP-containing transaminase. As PtaA is also present in a number of species incapable of pyoverdine production, it has been suggested to also be involved in other periplasmic biosynthesis pathways, which is why it received the general name “periplasmic transaminase A”. What is surprising and what makes this enzyme unusual is simply the fact that it is active in the periplasm. Like PvdN, PtaA is transported together with its PLP cofactor in a folded conformation via the twin-arginine protein translocation pathway. The cofactor thus enters the periplasm together with its protein in a tightly bound form, and it can therefore be assumed that the PLP is somehow regenerated from pyridoxamine after each reaction cycle inside the periplasm. Together, the recent advancements in the field established that there are two independent branches for the glutamate substitution inP. aeruginosa and P. fluorescens strains, which are (i) the PvdN-dependent branch that results in the succinamide and succinic acid as well as the intramolecular cyclization product, and (ii) the PtaA-dependent branch that results in α-ketoglutarate. There is nothing known about the biosynthesis of the rarely occurring malamide and malate forms of pyoverdines yet, which are not present in the current pyoverdine biosynthesis model organisms P. aeruginosa PAO1 and P. fluorescens A506. While it is likely that the malate is the hydrolysis product of the malamide, the malamide could in principle be formed by an unknown hydroxylating enzyme that acts on succinamide. The introduction of the hydroxyl group might also occur earlier, but a hydroxylated glutamate intermediate has never been found, suggesting some direct transformation of succinamide to malamide.
Reactions of periplasmic pyoverdine biogenesis may not occur in a strict order
When PvdN is removed, PtaA converts all the pyoverdine to its α-ketoglutarate form. Conversely, the lack of PtaA results in the succinamide and succinic acid forms generated by PvdN. Removal of both tailoring enzymes leaves the original glutamate unaltered. It is tempting to assume that the tailoring steps occur after formation of the fully oxidized fluorescent pyoverdine. However, this may not be the case. The dihydropyoverdine formed by pvdO deletion strains is accepted by PvdN as well as by PtaA as the correspondingly modified dihydropyoverdine forms have been found. Apparently, the planarity of the attached ring system is not a prerequisite for substrate binding to these enzymes. Moreover, Budzikiewicz et al. detected a ferribactin with a succinamide side-chain, demonstrating that PvdN may even accept ferribactin as substrate, which shows that the ring system is not really relevant for the tailoring enzymes PvdN and PtaA. It is so far unknown to which extent the intermediates can be channeled from one enzyme to the next, but there is no evidence yet for such a channeling that could impose an order of events.
Export of pyoverdines - More than one way out
After having summarized the knowledge about the enzymology of the biosynthesis steps, aspects of export, uptake, recycling and regulation need to be addressed to understand the physiology of pyoverdine biosynthesis. Pyoverdines can be exported via a transport system consisting of PvdR, PvdT, and OpmQ. This system has originally been shown to be involved in the secretion of pyoverdine that has been taken up from the environment and thus is recycled for multiple use, and later its involvement in transport of de novo synthesized pyoverdine was demonstrated. However, the PvdRT-OpmQ transporter cannot be the only export route, as strains mutated in this system are still able to secrete pyoverdines, albeit an accumulation in the periplasm has been demonstrated in such strains. Also a MexAB-OprM transporter has been implicated in pyoverdine secretion, but later studies indicate that the inactivation of this transporter had no significant effect on pyoverdine secretion. However, that study also indicated that the inactivation of the PvdRT-OpmQ system reduced pyoverdine secretion only to about 50-60%, which shows that also other systems must be involved. In P. taiwanensis, a type VI secretion system has been shown to mediate secretion of newly synthesized pyoverdine, and this study reports that the PvdRT-OmpQ system is not relevant for this process in their organism. Taken together, there is still considerable need to clarify under which conditions PvdRT-OmpQ systems are not only involved in recycling but also in secretion of de novo synthesized pyoverdines, and there is evidence that more not yet assigned transport systems are important.
Import of pyoverdines - iron acquisition and siderophore recycling
Organisms, especially those that live on or in host organisms, compete for the limited iron resources. Therefore, siderophore-uptake systems are usually specific for the siderophore that is used by the organism. Pyoverdines possess a highly variable, often even strain specific peptide moiety that confers distinguishable properties to the siderophore that can be taken up by differing uptake systems. Nonetheless, pyoverdine uptake systems exist that can use distinct pyoverdines of other strains. In the outer membrane, FpvA has been identified to be the ferripyoverdine receptor that recognizes iron-loaded pyoverdines. Its gene was cloned in 1993, and its structure was later elucidated in great detail. A number of mutational studies tried to elucidate the residues involved in pyoverdine binding, signaling and transport. In 2009 it could be demonstrated by Greenwald et al., that the first amino acid residues in the peptide backbone of pyoverdine determine the binding affinity of pyoverdines to their cognate or non-cognate Fpv’s. The uptake is probably energized by the direct interaction of FpvA with the TonB-ExbBD complex at the energized inner membrane, which transduces sufficient energy to the outer membrane for transport. P. aeruginosa has two TonB homologs, and albeit TonB1 seems to be more important for iron uptake, TonB2 can partially fulfill the function of TonB1.
FpvA not only binds ferripyoverdine but also to the iron-free apo-pyoverdine, which is not imported but exchanged by ferripyoverdine that is then imported. The exchange appears to be accelerated by TonB. However, it has been suggested that the observation regarding binding of apo-pyoverdine by FpvA might be an artifact and that the detected binding could be due to trace-contaminations of aluminum chelates. Indeed, FpvA can bind a wide range of other pyoverdine-metal complexes that in case of Cu2+, Ga3+, Mn2+ and Ni2+ may even be imported, albeit with a reduced rate. Furthermore, pyoverdine chelates of Al3+, Cu2+, Ga3+, Mn2+, Ni2+ and Zn2+ can induce pyoverdine production by binding to FpvA. Some strains possess several FpvA homologs with distinct or overlapping specificities for pyoverdines. A very extensive investigation in this matter was performed by Hartney et al. in 2013, who demonstrated the specificity of a multitude of Fpv homologs and their pyoverdine-scavenging potential in P. protegens Pf-5.
After import, pyoverdine is not degraded or modified, nor is it imported into the cytoplasm. Instead, Fe3+ is reduced to Fe2+ periplasmically, liberated from pyoverdine, and taken up by the ABC transporter FpvDE. Involved components are encoded in the fpvGHJK and fpvCDEF operons. The inner membrane proteins FpvG and FpvH are essential for iron release, and there is indirect evidence that FpvG catalyzes the reduction step. The other components, such as FpvJ, FpvK, or even the ABC transporter FpvDE and its two soluble periplasmic binding proteins FpvC and FpvF, affect the release partially. As expected for a binding protein of a ferrous iron ABC transporter, there is indirect experimental evidence for chelation of ferrous iron by FpvC. The thus recycled apo-pyoverdine is reexported as described above into the extracellular compartment by OpmQ-PvdRT. It has also been reported that pyoverdine can be stored in the periplasmic compartment but this process is not yet understood.
Regulation of pyoverdine production - iron limitation and beyond
As mentioned in the introduction, iron starvation is the key signal for pyoverdine production. The regulator Fur senses ferrous iron ions in the cytoplasm and represses genes involved in iron uptake, including those encoding the regulatory proteins FpvR, FpvI, and PvdS. PvdS is a sigma factor required for the expression of pyoverdine biosynthesis genes and other, often virulence-related genes, FpvI is a sigma factor required for the genes encoding the outer membrane pyoverdine receptor/importer FpvA, and FpvR is an anti-sigma factor that binds to and thereby inactivates PvdS and FpvI. FpvR autoproteolytic cleaves itself at a periplasmic domain without any further degradation unless it contacts ferripyoverdine-bound FpvA. When this FpvR/FpvA contact occurs, which involves the activity of TonB (the transport-energizing inner membrane protein; see section on import above), further proteolytic events that engage the protease RseP result in liberation of PvdS and FpvI and activation of their regulated genes. As the cascade begins with the sensing of a receptor-bound ferripyoverdine, it is noteworthy that some ferripyoverdine is required to activate the production of pyoverdine. In the absence of ferripyoverdine, the system therefore adjusts a basal level of PvdS and FpvI dependent gene expression, caused by a low abundance of FpvR, and this basal expression is required for the above described pyoverdine-dependent sensing pathway. In agreement with this view, mutants defective in pyoverdine production cannot upregulate the PvdS regulon under iron-limiting conditions. Finally, it is important to emphasize that the regulatory pathways for the production of pyoverdine play important roles beyond pyoverdine production. As mentioned above, the PvdS regulon also includes genes that are not involved in pyoverdine biosynthesis. In P. aeruginosa, such genes are clearly contributing to virulence, as the suppressed virulence of a pvdA deletion strain that lacks pyoverdines could be partially restored by deletion of the fpvR gene that encodes the anti-sigma factor FpvR. This pvdA/fpvR double mutant strain constitutively expresses the PvdS-dependent genes without producing pyoverdines. Pyoverdines that are initially sensed by the regulatory cascade thus can serve as signaling molecules in host environments. The above principal signaling pathway is summarized in Figure 4.
Interestingly, the regulation of pyoverdine biosynthesis is even more complex, because signals other than iron starvation have modulating effects. Among these are influences by the regulator CysB, which may imply a coordination with sulfur availability or biofilm formation and alginate production. Also phosphate starvation has been reported to trigger pyoverdine production in host environments. Additionally, the LexR type transcriptional regulator AmpR, which affects expression of more than 500 genes related to metabolism and virulence in P. aeruginosa, has recently been implicated in the regulation of pyoverdine production, and also the level of bis-(3’-5’)-cyclic dimeric guanosine monophosphate (c-di-GMP) is reported to modulate pyoverdine production.
Concluding remarks
Pyoverdines play important roles for many pathogenic and non-pathogenic pseudomonads that thrive in host habitats. It is important to understand the biosynthesis of pyoverdines, and this review intends to give a brief survey about our current knowledge and the open questions. There are still some components unknown and some catalytic mechanisms not understood. Beside the basics of biosynthesis, the physiological aspects will become more important in future, as the process has to be understood in terms of cell biology, communication, and host interaction. One of these aspects is regulation, which seems to become more complex and interwoven with multiple other regulatory pathways, ranging from biofilm formation to nutrient supply. Future will reveal what else we can learn from pyoverdines.
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Totter JR, Moseley FT. Influence of the concentration of iron on the production of fluorescin by Pseudomonas aeruginosa. J Bacteriol. 1953;65(1):45-47.
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Meyer JM, Abdallah MA. The fluorescent pigment of Pseudomonas fluorescens. J Gen Microbiol. 1978;107(2):319-328.
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Meyer JM, Hornsperger JM. Role of pyoverdinePf, the iron-binding fluorescent pigment of Pseudomonas fluorescens, in iron transport. J Gen Microbiol. 1978;107(2):329-331.
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Lankford CE, Byers BR. Bacterial assimilation of iron. Crit Rev Microbiol. 1973;2(3):273-331.
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Pasqua M, Visaggio D, Lo Sciuto A, Genah S, Banin E, Visca P, Imperi F. The ferric uptake regulator Fur is conditionally essential in Pseudomonas aeruginosa. J Bacteriol. 2017;199:e00472-e00417.
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Hassett DJ, Sokol PA, Howell ML, Ma JF, Schweizer HT, Ochsner U, Vasil ML. Ferric uptake regulator (Fur) mutants of Pseudomonas aeruginosa demonstrate defective siderophore-mediated iron uptake, altered aerobic growth, and decreased superoxide dismutase and catalase activities. J Bacteriol. 1996;178(14):3996-4003.
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Cézard C, Farvacques N, Sonnet P. Chemistry and biology of pyoverdines, Pseudomonas primary siderophores. Curr Med Chem. 2015;22(2):165-186.
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Meyer JM. Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch Microbiol. 2000;174(3):135-142.
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Jacques P, Ongena M, Gwose I, Seinsche D, Schröder H, Delfosse P, Thonart P, Taraz K, Budzikiewicz H. Structure and characterization of isopyoverdin from Pseudomonas putida BTP1 and its relation to the biogenetic pathway leading to pyoverdins. Z Naturforsch C. 1995;50(9-10):622-629.
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Jacques P, Gwose I, Seinsche D, Taraz K, Budzikiewicz H, Schröder H, Ongena M, Thonart P. Isopyoverdin Pp BTP 1, a biogenetically interesting novel siderophore from Pseudomonas putida. Nat Prod Lett. 1993;3(3):213-218.
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Mossialos D, Ochsner U, Baysse C, Chablain P, Pirnay J‐P, Koedam N, Budzikiewicz H, Fernández DU, Schäfer M, Ravel J, Cornelis P. Identification of new, conserved, non‐ribosomal peptide synthetases from fluorescent pseudomonads involved in the biosynthesis of the siderophore pyoverdine. Mol Microbiol. 2002;45(6):1673-1685.
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Lehoux DE, Sanschagrin F, Levesque RC. Genomics of the 35‐kb pvd locus and analysis of novel pvdIJK genes implicated in pyoverdine biosynthesis in Pseudomonas aeruginosa. FEMS Microbiol Lett. 2000;190(1):141-146.
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Merriman TR, Merriman ME, Lamont IL. Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases. J Bacteriol. 1995;177(1):252-258.
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Ackerley DF, Caradoc-Davies TT, Lamont IL. Substrate specificity of the nonribosomal peptide synthetase PvdD from Pseudomonas aeruginosa. J Bacteriol. 2003;185(9):2848-2855.
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Hohlneicher U, Schäfer M, Fuchs R, Budzikiewicz H. Ferribactins as the biosynthetic precursors of the Pseudomonas siderophores pyoverdins. Z Naturforsch C. 2001;56(3-4):308-310.
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Visca P, Imperi F, Lamont IL. Pyoverdine siderophores: from biogenesis to biosignificance. Trends Microbiol. 2007;15(1):22-30.
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Bloudoff K, Schmeing TM. Structural and functional aspects of the nonribosomal peptide synthetase condensation domain superfamily. Biochim Biophys Acta. 2017;11(Pt B):1587-1604.
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Drake EJ, Gulick AM. 1 Å resolution crystal structure of the periplasmic aminotransferase PvdN from Pseudomonas aeruginosa. Acta Crystallogr F Struct Biol Commun. 2016;72(Pt 5):403-408.
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Hannauer M, Schäfer M, Hoegy F, Gizzi P, Wehrung P, Mislin GLA, Budzikiewicz H, Schalk IJ. Biosynthesis of the pyoverdine siderophore of Pseudomonas aeruginosa involves precursors with a myristic or a myristoleic acid chain. FEBS Lett. 2012;586(1):96-101.
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Vandenende CS, Vlasschaert M, Seah SYK. Functional characterization of an aminotransferase required for pyoverdine siderophore biosynthesis in Pseudomonas aeruginosa PAO1. J Bacteriol. 2004;186(17):5596-5602.
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Visca P, Serino L, Orsi N. Isolation and characterization of Pseudomonas aeruginosa mutants blocked in the synthesis of pyoverdin. J Bacteriol. 1992;174(17):5727-5731.
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Visca P, Ciervo A, Orsi N. Cloning and nucleotide sequence of the pvdA gene encoding the pyoverdin biosynthetic enzyme L-ornithine N5-oxygenase in Pseudomonas aeruginosa. J Bacteriol. 1994;176(4):1128-1140.
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Ge L, Seah SYK. Heterologous expression, purification, and characterization of an L-Ornithine N5-hydroxylase involved in pyoverdine siderophore biosynthesis in Pseudomonas aeruginosa. J Bacteriol. 2006;188(20):7205-7210.
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Meneely KM, Barr EW, Bollinger JM, Lamb AL. Kinetic mechanism of ornithine hydroxylase (PvdA) from Pseudomonas aeruginosa: substrate triggering of O2 addition but not flavin reduction. Biochemistry. 2009;48(20):4371-4376.
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McMorran BJ, Shanta Kumara HM, Sullivan K, Lamont IL. Involvement of a transformylase enzyme in siderophore synthesis in Pseudomonas aeruginosa. Microbiology. 2001;147(Pt 6):1517-1524.
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Imperi F, Visca P. Subcellular localization of the pyoverdine biogenesis machinery of Pseudomonas aeruginosa: a membrane-associated "siderosome". FEBS Lett. 2013;587(21):3387-3391.
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Gasser V, Guillon L, Cunrath O, Schalk IJ. Cellular organization of siderophore biosynthesis in Pseudomonas aeruginosa: Evidence for siderosomes. J Inorg Biochem. 2015;148:27-34.
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Felnagle EA, Barkei JJ, Park H, Podevels AM, McMahon MD, Drott DW, Thomas MG. MbtH-like proteins as integral components of bacterial nonribosomal peptide synthetases. Biochemistry. 2010;49(41):8815-8817.
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Drake EJ, Cao J, Qu J, Shah MB, Straubinger RM, Gulick AM. The 1 Å crystal structure of PA2412, an MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa. J Biol Chem. 2007;282(28):20425-20434.
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Zhang W, Heemstra JR, Walsh CT, Imker HJ. Activation of the pacidamycin PacL adenylation domain by MbtH-like proteins. Biochemistry. 2010;49(46):9946-9947.
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Lamont IL, Martin LW. Identification and characterization of novel pyoverdine synthesis genes in Pseudomonas aeruginosa. Microbiology. 2003;149(Pt 4):833-842.
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Ravel J, Cornelis P. Genomics of pyoverdine-mediated iron uptake in pseudomonads. Trends Microbiol. 2003;11(5):195-200.
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Lamont IL, Martin LW, Sims T, Scott A, Wallace M. Characterization of a gene encoding an acetylase required for pyoverdine synthesis in Pseudomonas aeruginosa. J Bacteriol. 2006;188(8):3149-3152.
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McMorran BJ, Merriman ME, Rombel IT, Lamont IL. Characterisation of the pvdE gene which is required for pyoverdine synthesis in Pseudomonas aeruginosa. Gene. 1996;176(1-2):55-59.
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Yeterian E, Martin LW, Guillon L, Journet L, Lamont IL, Schalk IJ. Synthesis of the siderophore pyoverdine in Pseudomonas aeruginosa involves a periplasmic maturation. Amino Acids. 2010;38(5):1447-1459.
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Saurin W, Hofnung M, Dassa E. Getting in or out. J Mol Evol. 1999;48(1):22-41.
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Tsuda M, Miyazaki H, Nakazawa T. Genetic and physical mapping of genes involved in pyoverdin production in Pseudomonas aeruginosa PAO. J Bacteriol. 1995;177(2):423-431.
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Clevenger KD, Mascarenhas R, Catlin D, Wu R, Kelleher NL, Drake EJ, Gulick AM, Liu D, Fast W. Substrate Trapping in the Siderophore Tailoring Enzyme PvdQ. ACS Chem Biol. 2017;12(3):643-647.
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Bokhove M, Nadal Jimenez P, Quax WJ, Dijkstra BW. The quorum-quenching N-acyl homoserine lactone acylase PvdQ is an Ntn-hydrolase with an unusual substrate-binding pocket. Proc Natl Acad Sci U S A. 2010;107(2):686-691.
Not in our library10.1073/pnas.0911839107
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Huang JJ, Han J-I, Zhang L-H, Leadbetter JR. Utilization of acyl-homoserine lactone quorum signals for growth by a soil pseudomonad and Pseudomonas aeruginosa PAO1. Appl Environ Microbiol. 2003;69(10):5941-5949.
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Sio CF, Otten LG, Cool RH, Diggle SP, Braun PG, Bos R, Daykin M, Cámara M, Williams P, Quax WJ. Quorum quenching by an N-acyl-homoserine lactone acylase from Pseudomonas aeruginosa PAO1. Infect Immun. 2006;74(3):1673-1682.
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Nadal Jimenez P, Koch G, Papaioannou E, Wahjudi M, Krzeslak J, Coenye T, Cool RH, Quax WJ. Role of PvdQ in Pseudomonas aeruginosa virulence under iron-limiting conditions. Microbiology. 2010;156(Pt 1):49-59.
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Drake EJ, Gulick AM. Structural characterization and high-throughput screening of inhibitors of PvdQ, an NTN hydrolase involved in pyoverdine synthesis. ACS Chem Biol. 2011;6(11):1277-1286.
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Wurst JM, Drake EJ, Theriault JR, Jewett IT, VerPlank L, Perez JR, Dandapani S, Palmer M, Moskowitz SM, Schreiber SL, Munoz B, Gulick AM. Identification of inhibitors of PvdQ, an enzyme involved in the synthesis of the siderophore pyoverdine. ACS Chem Biol. 2014;9(7):1536-1544.
Not in our library10.1021/cb5001586
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Clevenger KD, Wu R, Er JAV, Liu D, Fast W. Rational design of a transition state analogue with picomolar affinity for Pseudomonas aeruginosa PvdQ, a siderophore biosynthetic enzyme. ACS Chem Biol. 2013;8(10):2192-2200.
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Hohlneicher U, Hartmann R, Taraz K, Budzikiewicz H. The Structure of Ferribactin from Pseudomonas fluorescens ATCC 13525. Z Naturforsch B. 1992;47(11).
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Dorrestein PC, Poole K, Begley TP. Formation of the chromophore of the pyoverdine siderophores by an oxidative cascade. Org Lett. 2003;5(13):2215-2217.
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Nadal-Jimenez P, Koch G, Reis CR, Muntendam R, Raj H, Jeronimus-Stratingh CM, Cool RH, Quax WJ. PvdP is a tyrosinase that drives maturation of the pyoverdine chromophore in Pseudomonas aeruginosa. J Bacteriol. 2014;196(14):2681-2690.
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Jacques P, Ongena M, Bernard F, Fuchs R, Budzikiewicz H, Thonart P. Fluorescent Pseudomonas mainly produce the dihydroform of pyoverdine at low specific growth rate. Lett Appl Microbiol. 2003;36(5):259-262.
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Bultreys A, Gheysen I, Maraite H, de Hoffmann E. Characterization of fluorescent and nonfluorescent peptide siderophores produced by Pseudomonas syringae strains and their potential use in strain identification. Appl Environ Microbiol. 2001;67(4):1718-1727.
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- 59.
Teintze M, Leong J. Structure of pseudobactin A, a second siderophore from plant growth promoting Pseudomonas B10. Biochemistry. 1981;20(22):6457-6462.
Not in our library10.1021/bi00525a026
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Ringel MT, Dräger G, Brüser T. PvdO is required for the oxidation of dihydropyoverdine as last step of fluorophore formation in Pseudomonas fluorescens. J Biol Chem. 2017;293(7):2330-2341.
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Longerich I, Taraz K, Budzikiewicz H, Tsai L, Meyer JM. Pseudoverdin, a compound related to the pyoverdin chromophore from a Pseudomonas aeruginosa strain incapable to produce pyoverdins. Z Naturforsch C. 1993;48(5-6):425-429.
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Schröder H, Taraz JAK, Budzikiewicz H. Dihydropyoverdinsulfonsäuren - Zwischenstufen bei der Biogenese? Z Naturforsch C 50. 1995;50(9-10):616-621.
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Budzikiewicz H. Bacterial aromatic sulfonates - A bucherer reaction in nature? Mini-Reviews in Organic Chemistry. 2006;3(2):93-97.
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Baysse C, Budzikiewicz H, Uría Fernández D, Cornelis P. Impaired maturation of the siderophore pyoverdine chromophore in Pseudomonas fluorescens ATCC 17400 deficient for the cytochrome c biogenesis protein CcmC. FEBS Lett. 2002;523(1-3):23-28.
Not in our library10.1016/s0014-5793(02)02915-0
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Gaballa A, Koedam N, Cornelis P. A cytochrome c biogenesis gene involved in pyoverdine production in Pseudomonas fluorescens ATCC 17400. Mol Microbiol. 1996;21(4):777-785.
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Gaballa A, Baysse C, Koedam N, Muyldermans S, Cornelis P. Different residues in periplasmic domains of the CcmC inner membrane protein of Pseudomonas fluorescens ATCC 17400 are critical for cytochrome c biogenesis and pyoverdine-mediated iron uptake. Mol Microbiol. 1998;30(3):547-555.
Not in our library10.1046/j.1365-2958.1998.01085.x
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Ahuja U, Thöny-Meyer L. CcmD is involved in complex formation between CcmC and the heme chaperone CcmE during cytochrome c maturation. J Biol Chem. 2005;280(1):236-243.
Not in our library10.1074/jbc.m410912200
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Ahuja U, Thöny-Meyer L. Dynamic features of a heme delivery system for cytochrome C maturation. J Biol Chem. 2003;278(52):52061-52070.
Not in our library10.1074/jbc.m310077200
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Feissner RE, Richard-Fogal CL, Frawley ER, Kranz RG. ABC transporter-mediated release of a haem chaperone allows cytochrome c biogenesis. Mol Microbiol. 2006;61(1):219-231.
Not in our library10.1111/j.1365-2958.2006.05221.x
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Richard-Fogal C, Kranz RG. The CcmC:heme:CcmE complex in heme trafficking and cytochrome c biosynthesis. J Mol Biol. 2010;401(3):350-362.
Not in our library10.1016/j.jmb.2010.06.041
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Ringel MT, Dräger G, Brüser T. PvdN enzyme catalyzes a periplasmic pyoverdine modification. J Biol Chem. 2016;291(46):23929-23938.
Not in our library10.1074/jbc.m116.755611
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Ochsner UA, Wilderman PJ, Vasil AI, Vasil ML. GeneChip® expression analysis of the iron starvation response in Pseudomonas aeruginosa. Mol Microbiol. 2002;45(5):1277-1287.
Not in our library10.1046/j.1365-2958.2002.03084.x
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Voulhoux R, Filloux A, Schalk IJ. Pyoverdine-mediated iron uptake in Pseudomonas aeruginosa: the Tat system is required for PvdN but not for FpvA transport. J Bacteriol. 2006;188(9):3317-3323.
Not in our library10.1128/jb.188.9.3317-3323.2006
- 74.
Ringel MT, Dräger G, Brüser T. The periplasmic transaminase PtaA of Pseudomonas fluorescens converts the glutamic acid residue at the pyoverdine fluorophore to α-ketoglutaric acid. J Biol Chem. 2017;292(45):18660-18671.
Not in our library10.1074/jbc.m117.812545
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Budzikiewicz H, Schäfer M, Fernández DU, Matthijs S, Cornelis P. Characterization of the chromophores of pyoverdins and related siderophores by electrospray tandem mass spectrometry. Biometals. 2007;20(2):135-144.
Not in our library10.1007/s10534-006-9021-3
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Hannauer M, Yeterian E, Martin LW, Lamont IL, Schalk IJ. An efflux pump is involved in secretion of newly synthesized siderophore by Pseudomonas aeruginosa. FEBS Lett. 2010;584(23):4751-4755.
Not in our library10.1016/j.febslet.2010.10.051
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Yeterian E, Martin LW, Lamont IL, Schalk IJ. An efflux pump is required for siderophore recycling by Pseudomonas aeruginosa. Environ Microbiol Rep. 2010;2(3):412-418.
Not in our library10.1111/j.1758-2229.2009.00115.x
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Imperi F, Tiburzi F, Visca P. Molecular basis of pyoverdine siderophore recycling in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 2009;106(48):20440-20445.
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Poole K, Krebes K, McNally C, Neshat S. Multiple antibiotic resistance in Pseudomonas aeruginosa: evidence for involvement of an efflux operon. J Bacteriol. 1993;175(22):7363-7372.
Not in our library10.1128/jb.175.22.7363-7372.1993
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Poole K, Heinrichs DE, Neshat S. Cloning and sequence analysis of an EnvCD homologue in Pseudomonas aeruginosa. Mol Microbiol. 1993;10(3):529-544.
Not in our library10.1111/j.1365-2958.1993.tb00925.x
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Li XZ, Nikaido H, Poole K. Role of mexA-mexB-oprM in antibiotic efflux in Pseudomonas aeruginosa. Antimicrob Agents Chemother. 1995;39(9):1948-1953.
Not in our library10.1128/aac.39.9.1948
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Chen W-J, Kuo T-Y, Hsieh F-C, Chen P-Y, Wang C-S, Shih Y-L, Lai Y-M, Liu J-R, Yang Y-L, Shih M-C. Involvement of type VI secretion system in secretion of iron chelator pyoverdine in Pseudomonas taiwanensis. Sci Rep. 2016;6:32950.
Not in our library10.1038/srep32950
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Hohnadel D, Meyer JM. Specificity of pyoverdine-mediated iron uptake among fluorescent Pseudomonas strains. J Bacteriol. 1988;170(10):4865-4873.
Not in our library10.1128/jb.170.10.4865-4873.1988
- 84.
Cornelis P, Hohnadel D, Meyer JM. Evidence for different pyoverdine-mediated iron uptake systems among Pseudomonas aeruginosa strains. Infect Immun. 1989;57(11):3491-3497.
Not in our library10.1128/iai.57.11.3491-3497.1989
- 85.
Meyer JM, Hohnadel D, Khan A, Cornelis P. Pyoverdin-facilitated iron uptake in Pseudomonas aeruginosa: immunological characterization of the ferripyoverdin receptor. Mol Microbiol. 1990;4(8):1401-1405.
Not in our library10.1111/j.1365-2958.1990.tb00719.x
- 86.
Poole K, Neshat S, Heinrichs D. Pyoverdine‐mediated iron transport in Pseudomonas aeruginosa. FEMS Microbiol Lett. 1991;78(1):1-6.
Not in our library10.1111/j.1574-6968.1991.tb04406.x
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Poole K, Neshat S, Krebes K, Heinrichs DE. Cloning and nucleotide sequence analysis of the ferripyoverdine receptor gene fpvA of Pseudomonas aeruginosa. J Bacteriol. 1993;175(15):4597-4604.
Not in our library10.1128/jb.175.15.4597-4604.1993
- 88.
Cobessi D, Celia H, Folschweiller N, Schalk IJ, Abdallah MA, Pattus F. The crystal structure of the pyoverdine outer membrane receptor FpvA from Pseudomonas aeruginosa at 3 angstroms resolution. J Mol Biol. 2005;347(1):121-134.
Not in our library10.1016/j.jmb.2005.01.021
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Wirth C, Meyer-Klaucke W, Pattus F, Cobessi D. From the periplasmic signaling domain to the extracellular face of an outer membrane signal transducer of Pseudomonas aeruginosa: crystal structure of the ferric pyoverdine outer membrane receptor. J Mol Biol. 2007;368(2):398-406.
Not in our library10.1016/j.jmb.2007.02.023
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Brillet K, Journet L, Célia H, Paulus L, Stahl A, Pattus F, Cobessi D. A β strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif. Structure. 2007;15(11):1383-1391.
Not in our library10.1016/j.str.2007.08.013
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James HE, Beare PA, Martin LW, Lamont IL. Mutational analysis of a bifunctional ferrisiderophore receptor and signal-transducing protein from Pseudomonas aeruginosa. J Bacteriol. 2005;187(13):4514-4520.
Not in our library10.1128/jb.187.13.4514-4520.2005
- 92.
Shen J-S, Geoffroy V, Neshat S, Jia Z, Meldrum A, Meyer J-M, Poole K. FpvA-mediated ferric pyoverdine uptake in Pseudomonas aeruginosa. J Bacteriol. 2005;187(24):8511-8515.
Not in our library10.1128/jb.187.24.8511-8515.2005
- 93.
Nader M, Dobbelaere W, Vincent M, Journet L, Adams H, Cobessi D, Gallay J, Schalk IJ. Identification of residues of FpvA involved in the different steps of Pvd-Fe uptake in Pseudomonas aeruginosa. Biochemistry. 2007;46(42):11707-11717.
Not in our library10.1021/bi700997w
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Greenwald J, Nader M, Celia H, Gruffaz C, Geoffroy V, Meyer J‐M, Schalk IJ, Pattus F. FpvA bound to non-cognate pyoverdines: molecular basis of siderophore recognition by an iron transporter. Mol Microbiol. 2009;72(5):1246-1259.
Not in our library10.1111/j.1365-2958.2009.06721.x
- 95.
Adams H, Zeder-Lutz G, Schalk I, Pattus F, Celia H. Interaction of TonB with the outer membrane receptor FpvA of Pseudomonas aeruginosa. J Bacteriol. 2006;188(16):5752-5761.
Not in our library10.1128/jb.00435-06
- 96.
Nader M, Journet L, Meksem A, Guillon L, Schalk IJ. Mechanism of ferripyoverdine uptake by Pseudomonas aeruginosa outer membrane transporter FpvA. Biochemistry. 2011;50(13):2530-2540.
Not in our library10.1021/bi101821n
- 97.
Zhao Q, Poole K. A second tonB gene in Pseudomonas aeruginosa is linked to the exbB and exbD genes. FEMS Microbiol Lett. 2000;184(1):127-132.
Not in our library10.1111/j.1574-6968.2000.tb09002.x
- 98.
Schalk IJ, Abdallah MA, Pattus F. A new mechanism for membrane iron transport in Pseudomonas aeruginosa. Biochem Soc Trans. 2002;30(4):702-705.
Not in our library10.1042/bst0300702
- 99.
Schalk IJ, Hennard C, Dugave C, Poole K, Abdallah MA, Pattus F. Iron-free pyoverdin binds to its outer membrane receptor FpvA in Pseudomonas aeruginosa. Mol Microbiol. 2001;39(2):351-361.
Not in our library10.1046/j.1365-2958.2001.02207.x
- 100.
Clément E, Mesini PJ, Pattus F, Schalk IJ. The binding mechanism of pyoverdin with the outer membrane receptor FpvA in Pseudomonas aeruginosa is dependent on its iron-loaded status. Biochemistry. 2004;43(24):7954-7965.
Not in our library10.1021/bi049768c
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Greenwald J, Zeder-Lutz G, Hagege A, Celia H, Pattus F. The metal dependence of pyoverdine interactions with its outer membrane receptor FpvA. J Bacteriol. 2008;190(20):6548-6558.
Not in our library10.1128/jb.00784-08
- 102.
Cornelis P. Unexpected interaction of a siderophore with aluminum and its receptor. J Bacteriol. 2008;190(20):6541-6543.
Not in our library10.1128/jb.00954-08
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Braud A, Hoegy F, Jezequel K, Lebeau T, Schalk IJ. New insights into the metal specificity of the Pseudomonas aeruginosa pyoverdine-iron uptake pathway. Environ Microbiol. 2009;11(5):1079-1091.
Not in our library10.1111/j.1462-2920.2008.01838.x
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Hartney SL, Mazurier S, Girard MK, Mehnaz S, Davis EW, Gross H, Lemanceau P, Loper JE. Ferric-pyoverdine recognition by Fpv outer membrane proteins of Pseudomonas protegens Pf-5. J Bacteriol. 2013;195(4):765-776.
Not in our library10.1128/jb.01639-12
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Brillet K, Ruffenach F, Adams H, Journet L, Gasser V, Hoegy F, Guillon L, Hannauer M, Page A, Schalk IJ. An ABC transporter with two periplasmic binding proteins involved in iron acquisition in Pseudomonas aeruginosa. ACS Chem Biol. 2012;7(12):2036-2045.
Not in our library10.1021/cb300330v
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Ganne G, Brillet K, Basta B, Roche B, Hoegy F, Gasser V, Schalk IJ. Iron release from the siderophore pyoverdine in Pseudomonas aeruginosa involves three new actors: FpvC, FpvG, and FpvH. ACS Chem Biol. 2017;12(4):1056-1065.
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Schalk IJ, Guillon L. Pyoverdine biosynthesis and secretion in Pseudomonas aeruginosa: implications for metal homeostasis. Environ Microbiol. 2013;15(6):1661-1673.
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Ochsner UA, Vasil ML. Gene repression by the ferric uptake regulator in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 1996;93(9):4409-4414.
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Palma M, Worgall S, Quadri LEN. Transcriptome analysis of the Pseudomonas aeruginosa response to iron. Arch Microbiol. 2003;180(5):374-379.
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Cornelis P, Matthijs S, van Oeffelen L. Iron uptake regulation in Pseudomonas aeruginosa. Biometals. 2009;22(1):15-22.
Not in our library10.1007/s10534-008-9193-0
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Vasil ML, Ochsner UA, Johnson Z, Colmer JA, Hamood AN. The Fur-regulated gene encoding the alternative sigma factor PvdS is required for iron-dependent expression of the LysR-type regulator PtxR in Pseudomonas aeruginosa. J Bacteriol. 1998;180(24):6784-6788.
Not in our library10.1128/jb.180.24.6784-6788.1998
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Gaines JM, Carty NL, Tiburzi F, Davinic M, Visca P, Colmer-Hamood JA, Hamood AN. Regulation of the Pseudomonas aeruginosa toxA, regA and ptxR genes by the iron-starvation sigma factor PvdS under reduced levels of oxygen. Microbiology. 2007;153(Pt 12):4219-4233.
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Ochsner UA, Johnson Z, Lamont IL, Cunliffe HE, Vasil ML. Exotoxin A production in Pseudomonas aeruginosa requires the iron-regulated pvdS gene encoding an alternative sigma factor. Mol Microbiol. 1996;21(5):1019-1028.
Not in our library10.1046/j.1365-2958.1996.481425.x
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Visca P. Iron regulation and siderophore signalling in virulence by Pseudomonas aeruginosa. In: Pseudomonas. (Ramos, J.-L., Eds). 2004;69-123.
Not in our library10.1007/978-1-4419-9084-6_3
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Wilderman PJ, Vasil AI, Johnson Z, Wilson MJ, Cunliffe HE, Lamont IL, Vasil ML. Characterization of an endoprotease (PrpL) encoded by a PvdS-regulated gene in Pseudomonas aeruginosa. Infect Immun. 2001;69(9):5385-5394.
Not in our library10.1128/iai.69.9.5385-5394.2001
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Prince RW, Cox CD, Vasil ML. Coordinate regulation of siderophore and exotoxin A production. J Bacteriol. 1993;175(9):2589-2598.
Not in our library10.1128/jb.175.9.2589-2598.1993
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Wilson MJ, Lamont IL. Characterization of an ECF sigma factor protein from Pseudomonas aeruginosa. Biochem Biophys Res Commun. 2000;273(2):578-583.
Not in our library10.1006/bbrc.2000.2996
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Cunliffe HE, Merriman TR, Lamont IL. Cloning and characterization of pvdS, a gene required for pyoverdine synthesis in Pseudomonas aeruginosa. J Bacteriol. 1995;177(10):2744-2750.
Not in our library10.1128/jb.177.10.2744-2750.1995
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Rédly GA, Poole K. FpvIR control of fpvA ferric pyoverdine receptor gene expression in Pseudomonas aeruginosa: demonstration of an interaction between FpvI and FpvR and identification of mutations in each compromising this interaction. J Bacteriol. 2005;187(16):5648-5657.
Not in our library10.1128/jb.187.16.5648-5657.2005
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Rédly GA, Poole K. Pyoverdine-mediated regulation of FpvA synthesis in Pseudomonas aeruginosa. J Bacteriol. 2003;185(4):1261-1265.
Not in our library10.1128/jb.185.4.1261-1265.2003
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Minandri F, Imperi F, Frangipani E, Bonchi C, Visaggio D, Facchini M, Pasquali P, Bragonzi A, Visca P. Role of iron uptake systems in Pseudomonas aeruginosa virulence and airway infection. Infect Immun. 2016;84(8):2324-2335.
Not in our library10.1128/iai.00098-16
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Draper RC, Martin LW, Beare PA, Lamont IL. Differential proteolysis of sigma regulators controls cell-surface signalling in Pseudomonas aeruginosa. Mol Microbiol. 2011;82(6):1444-1453.
Not in our library10.1111/j.1365-2958.2011.07901.x
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Bastiaansen KC, Otero-Asman JR, Luirink J, Bitter W, Llamas MA. Processing of cell-surface signalling anti-sigma factors prior to signal recognition is a conserved autoproteolytic mechanism that produces two functional domains. Environ Microbiol. 2015;17(9):3263-3277.
Not in our library10.1111/1462-2920.12776
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Llamas MA, Imperi F, Visca P, Lamont IL. Cell-surface signaling in Pseudomonas: stress responses, iron transport, and pathogenicity. FEMS Microbiol Rev. 2014;38(4):569-597.
Not in our library10.1111/1574-6976.12078
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Spencer MR, Beare PA, Lamont IL. Role of cell surface signaling in proteolysis of an alternative sigma factor in Pseudomonas aeruginosa. J Bacteriol. 2008;190(14):4865-4869.
Not in our library10.1128/jb.01998-07
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Wilson MJ, McMorran BJ, Lamont IL. Analysis of promoters recognized by PvdS, an extracytoplasmic-function sigma factor protein from Pseudomonas aeruginosa. J Bacteriol. 2001;183(6):2151-2155.
Not in our library10.1128/jb.183.6.2151-2155.2001
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Edgar RJ, Hampton GE, Garcia GPC, Maher MJ, Perugini MA, Ackerley DF, Lamont IL. Integrated activities of two alternative sigma factors coordinate iron acquisition and uptake by Pseudomonas aeruginosa. Mol Microbiol. 2017;106(6):891-904.
Not in our library10.1111/mmi.13855
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Lamont IL, Beare PA, Ochsner U, Vasil AI, Vasil ML. Siderophore-mediated signaling regulates virulence factor production in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 2002;99(10):7072-7077.
Not in our library10.1073/pnas.092016999
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Beare PA, For RJ, Martin LW, Lamont IL. Siderophore‐mediated cell signalling in Pseudomonas aeruginosa: divergent pathways regulate virulence factor production and siderophore receptor synthesis. Mol Microbiol. 2003;47(1):195-207.
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Imperi F, Tiburzi F, Fimia GM, Visca P. Transcriptional control of the pvdS iron starvation sigma factor gene by the master regulator of sulfur metabolism CysB in Pseudomonas aeruginosa. Environ Microbiol. 2010;12(6):1630-1642.
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Delic-Attree I, Toussaint B, Garin J, Vignais PM. Cloning, sequence and mutagenesis of the structural gene of Pseudomonas aeruginosa CysB, which can activate algD transcription. Mol Microbiol. 1997;24(6):1275-1284.
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Zaborin A, Romanowski K, Gerdes S, Holbrook C, Lepine F, Long J, Poroyko V, Diggle SP, Wilke A, Righetti K, Morozova I, Babrowski T, Liu DC, Zaborina O, Alverdy JC. Red death in Caenorhabditis elegans caused by Pseudomonas aeruginosa PAO1. Proc Natl Acad Sci U S A. 2009;106(15):6327-6332.
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Balasubramanian D, Kumari H, Jaric M, Fernandez M, Turner KH, Dove SL, Narasimhan G, Lory S, Mathee K. Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response. Nucleic Acids Res. 2014;42(2):979-998.
Not in our library10.1093/nar/gkt942
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Chen Y, Yuan M, Mohanty A, Yam JKH, Liu Y, Chua SL, Nielsen TE, Tolker-Nielsen T, Givskov M, Cao B, Yang L. Multiple diguanylate cyclase-coordinated regulation of pyoverdine synthesis in Pseudomonas aeruginosa. Environ Microbiol Rep. 2015;7(3):498-507.
Not in our library10.1111/1758-2229.12278
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