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Genome-wide screening of upstream transcription factors using an expression library [version 2; peer review: 2 approved]

Naoya Yahagi, Yoshinori Takeuchi

F1000Research · 2021

doi:10.12688/f1000research.27532.2 (opens in a new tab)

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Abstract

The identification of upstream transcription factors regulating the expression of a gene is generally not an easy process. To facilitate this task, we constructed an expression cDNA library named Transcription Factor Expression Library (TFEL), which is composed of nearly all the transcription factors in the mouse genome. Genome-wide screening using this library (TFEL scan method) enables us to easily identify transcription factors controlling any given promoter or enhancer of interest in a chromosomal context-dependent manner. Thus, TFEL scan method is a powerful approach to explore transcriptional regulatory networks.

Abstract licence: CC BY

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