Bacterial Phylogenetic Reconstruction from Whole Genomes Is Robust to Recombination but Demographic Inference Is Not

Cited by papers we hold 7

• Phylogenetic background and habitat drive the genetic diversification of Escherichia coli · 2020
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• Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales · 2018
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• Bayesian inference of ancestral dates on bacterial phylogenetic trees · 2018
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• Genome-scale rates of evolutionary change in bacteria · 2016
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• Inferences from tip‐calibrated phylogenies: a review and a practical guide · 2016
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• ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes · 2015
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• Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections · 2015
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