No retraction, correction or concern found when last checked on Oct 31, 2026.
Identification and characterization of two families of F 420 H 2 ‐dependent reductases from Mycobacteria that catalyse aflatoxin degradation
Matthew C. Taylor, Colin J. Jackson, David B. Tattersall and 9 more
Molecular Microbiology · 2010
doi:10.1111/j.1365-2958.2010.07356.x
Abstract
Summary Aflatoxins are polyaromatic mycotoxins that contaminate a range of food crops as a result of fungal growth and contribute to serious health problems in the developing world because of their toxicity and mutagenicity. Although relatively resistant to biotic degradation, aflatoxins can be metabolized by certain species of Actinomycetales . However, the enzymatic basis for their breakdown has not been reported until now. We have identified nine Mycobacterium smegmatis enzymes that utilize the deazaflavin cofactor F 420 H 2 to catalyse the reduction of the α,β‐unsaturated ester moiety of aflatoxins, activating the molecules for spontaneous hydrolysis and detoxification. These enzymes belong to two previously uncharacterized F 420 H 2 dependent reductase (FDR‐A and ‐B) families that are distantly related to the flavin mononucleotide (FMN) dependent pyridoxamine 5′‐phosphate oxidases (PNPOxs). We have solved crystal structures of an enzyme from each FDR family and show that they, like the PNPOxs, adopt a split barrel protein fold, although the FDRs also possess an extended and highly charged F 420 H 2 binding groove. A general role for these enzymes in xenobiotic metabolism is discussed, including the observation that the nitro‐reductase Rv3547 from Mycobacterium tuberculosis that is responsible for the activation of bicyclic nitroimidazole prodrugs belongs to the FDR‐A family.
Shown for reading. Its publisher allows quoting it, not republishing it.
References 70
- 1.
Alberts JF, Engelbrecht Y, Steyn PS, Holzapfel WH, van Zyl WH. Biological degradation of aflatoxin B1 by Rhodococcus erythropolis cultures. Int J Food Microbiol. 2006;109:121-126.
Not in our library10.1016/j.ijfoodmicro.2006.01.019
- 2.
Bashiri G, Squire CJ, Moreland NJ, Baker EN. Crystal structures of F420-dependent glucose-6-phosphate dehydrogenase FGD1 involved in the activation of the anti-tuberculosis drug candidate PA-824 reveal the basis of coenzyme and substrate binding. J Biol Chem. 2008;283:17531-17541.
Not in our library10.1074/jbc.m801854200
- 3.
Biswal BK, Cherney MM, Wang M, Garen C, James MN. Structures of Mycobacterium tuberculosis pyridoxine 5′-phosphate oxidase and its complexes with flavin mononucleotide and pyridoxal 5′-phosphate. Acta Crystallogr D Biol Crystallogr. 2005;61:1492-1499.
Not in our library10.1107/s0907444905026673
- 4.
Biswal BK, Au K, Cherney MM, Garen C, James MN. The molecular structure of Rv2074, a probable pyridoxine 5′-phosphate oxidase from Mycobacterium tuberculosis, at 1.6 angstroms resolution. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006;62:735-742.
Not in our library10.1107/s1744309106025012
- 5.
Campbell PM, Cao AT, Hines ER, East PD, Gordon KH. Proteomic analysis of the peritrophic matrix from the gut of the caterpillar, Helicoverpa armigera. Insect Biochem Mol Biol. 2008;38:950-958.
Not in our library10.1016/j.ibmb.2008.07.009
- 6.
Canaan S, Sulzenbacher G, Roig-Zamboni V, Scappuccini-Calvo L, Frassinetti F, Maurin D, et al. Crystal structure of the conserved hypothetical protein Rv1155 from Mycobacterium tuberculosis. FEBS Lett. 2005;579:215-221.
Not in our library10.1016/j.febslet.2004.11.069
- 7.
Choi KP, Kendrick N, Daniels L. Demonstration that fbiC is required by Mycobacterium bovis BCG for coenzyme F(420) and FO biosynthesis. J Bacteriol. 2002;184:2420-2428.
Not in our library10.1128/jb.184.9.2420-2428.2002
- 8.
Chung JY, Fujii I, Harada S, Sankawa U, Ebizuka Y. Expression, purification, and characterization of AknX anthrone oxygenase, which is involved in aklavinone biosynthesis in Streptomyces galilaeus. J Bacteriol. 2002;184:6115-6122.
Not in our library10.1128/jb.184.22.6115-6122.2002
- 9.
Ciegler A, Lillehoj EB, Peterson RE, Hall HH. Microbial detoxification of aflatoxin. Appl Microbiol. 1966;14:934-939.
Not in our library10.1128/am.14.6.934-939.1966
- 10.
Deppenmeier U. The unique biochemistry of methanogenesis. Prog Nucleic Acid Res Mol Biol. 2002;71:223-283.
Not in our library10.1016/s0079-6603(02)71045-3
- 11.
Draper RD, Ingraham LL. A potentiometric study of the flavin semiquinone equilibrium. Arch Biochem Biophys. 1968;125:802-808.
Not in our library10.1016/0003-9861(68)90517-1
- 12.
Ebert S, Fischer P, Knackmuss HJ. Converging catabolism of 2,4,6-trinitrophenol (picric acid) and 2,4-dinitrophenol by Nocardioides simplex FJ2-1A. Biodegradation. 2001;12:367-376.
Not in our library10.1023/a:1014447700775
- 13.
van Egmond HP, Schothorst RC, Jonker MA. Regulations relating to mycotoxins in food: perspectives in a global and European context. Anal Bioanal Chem. 2007;389:147-157.
Not in our library10.1007/s00216-007-1317-9
- 14.
El-Tarabily KA, Sivasithamparam K. Non-streptomycete actinomycetes as biocontrol agents of soil-borne fungal plant pathogens and as plant growth promoters. Soil Biol Biochem. 2006;38:1505-1520.
Not in our library
- 15.
Emsley P, Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr D. 2004;60:2126-2132.
Not in our library10.1107/s0907444904019158
- 16.
Evans P. Scaling and assessment of data quality. Acta Crystallogr D Biol Crystallogr. 2006;62:72-82.
Not in our library10.1107/s0907444905036693
- 17.
Goldberg M, Pecht I, Kramer HE, Traber R, Hemmerich P. Structure and properties of 5-deazaflavin radicals as compared to natural flavosemiquinones. Biochim Biophys Acta. 1981;673:570-593.
Not in our library10.1016/0304-4165(81)90487-6
- 18.
Graham DE, White RH. Elucidation of methanogenic coenzyme biosyntheses: from spectroscopy to genomics. Nat Prod Rep. 2002;19:133-147.
Not in our library10.1039/b103714p
- 19.
Graham DE, Xu H, White RH. Identification of the 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase required for coenzyme F(420) biosynthesis. Arch Microbiol. 2003;180:455-464.
Not in our library10.1007/s00203-003-0614-8
- 20.
Grant PG, Phillips TD. Isothermal adsorption of aflatoxin B-1 on HSCAS clay. J Agric Food Chem. 1998;46:599-605.
Not in our library10.1021/jf970604v
- 21.
Graupner M, White RH. Biosynthesis of the phosphodiester bond in coenzyme F(420) in the methanoarchaea. Biochemistry. 2001;40:10859-10872.
Not in our library10.1021/bi0107703
- 22.
Guerra-Lopez D, Daniels L, Rawat M. Mycobacterium smegmatis mc(2) 155 fbiC and MSMEG_2392 are involved in triphenylmethane dye decolorization and coenzyme F-420 biosynthesis. Microbiology-Sgm. 2007;153:2724-2732.
Not in our library10.1099/mic.0.2006/009241-0
- 23.
Hasan MR, Rahman M, Jaques S, Purwantini E, Daniels L. Glucose-6-phosphate accumulation in mycobacteria: implications for a novel F420-dependent anti-oxidant defense system. J Biol Chem. 2010;285:19135-19144.
Not in our library10.1074/jbc.m109.074310
- 24.
Holm L, Kaariainen S, Rosenstrom P, Schenkel A. Searching protein structure databases with DaliLite v.3. Bioinformatics. 2008;24:2780-2781.
Not in our library10.1093/bioinformatics/btn507
- 25.
Hormisch D, Brost I, Kohring GW, Giffhorn F, Kroppenstedt RM, Stackebrandt E, et al. Mycobacterium fluoranthenivorans sp. nov., a fluoranthene and aflatoxin B1 degrading bacterium from contaminated soil of a former coal gas plant. Syst Appl Microbiol. 2004;27:653-660.
Not in our library10.1078/0723202042369866
- 26.
Horne I, Sutherland TD, Harcourt RL, Russell RJ, Oakeshott JG. Identification of an opd (organophosphate degradation) gene in an Agrobacterium isolate. Appl Environ Microbiol. 2002a;68:3371-3376.
Not in our library10.1128/aem.68.7.3371-3376.2002
- 27.
Horne I, Sutherland TD, Oakeshott JG, Russell RJ. Cloning and expression of the phosphotriesterase gene hocA from Pseudomonas monteilii C11. Microbiology. 2002b;148:2687-2695.
Not in our library10.1099/00221287-148-9-2687
- 28.
Igawa T, Takahashi-Ando N, Ochiai N, Ohsato S, Shimizu T, Kudo T, et al. Reduced contamination by the Fusarium mycotoxin zearalenone in maize kernels through genetic modification with a detoxification gene. Appl Environ Microbiol. 2007;73:1622-1629.
Not in our library10.1128/aem.01077-06
- 29.
Isabelle D, Simpson DR, Daniels L. Large-scale production of coenzyme F420-5,6 by using Mycobacterium smegmatis. Appl Environ Microbiol. 2002;68:5750-5755.
Not in our library10.1128/aem.68.11.5750-5755.2002
- 30.
Jackson CJ, Taylor MC, Tattersall DB, French NG, Carr PD, Ollis DL, et al. Cloning, expression, purification, crystallization and preliminary X-ray studies of a pyridoxine 5′-phosphate oxidase from Mycobacterium smegmatis. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008;64:435-437.
Not in our library10.1107/s1744309108011512
- 31.
Jacobson F, Walsh C. Properties of 7,8-didemethyl-8-hydroxy-5-deazaflavins relevant to redox coenzyme function in methanogen metabolism. Biochemistry. 1984;23:979-988.
Not in our library
- 32.
Johnson EF, Mukhopadhyay B. A new type of sulfite reductase, a novel coenzyme F420-dependent enzyme, from the methanarchaeon Methanocaldococcus jannaschii. J Biol Chem. 2005;280:38776-38786.
Not in our library10.1074/jbc.m503492200
- 33.
Kelley LA, Sternberg MJ. Protein structure prediction on the Web: a case study using the Phyre server. Nat Protoc. 2009;4:363-371.
Not in our library10.1038/nprot.2009.2
- 34.
Lee LS, Dunn JJ, DeLucca AJ, Ciegler A. Role of lactone ring of aflatoxin B1 in toxicity and mutagenicity. Experientia. 1981;37:16-17.
Not in our library10.1007/bf01965543
- 35.
Leslie AG. The integration of macromolecular diffraction data. Acta Crystallogr D Biol Crystallogr. 2006;62:48-57.
Not in our library10.1107/s0907444905039107
- 36.
Manjunatha UH, Boshoff H, Dowd CS, Zhang L, Albert TJ, Norton JE, et al. Identification of a nitroimidazo-oxazine-specific protein involved in PA-824 resistance in Mycobacterium tuberculosis. Proc Natl Acad Sci USA. 2006;103:431-436.
Not in our library10.1073/pnas.0508392103
- 37.
Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, et al. CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 2007;35:D237-D240.
Not in our library10.1093/nar/gkl951
- 38.
Miller CD, Hall K, Liang YN, Nieman K, Sorensen D, Issa B, et al. Isolation and characterization of polycyclic aromatic hydrocarbon-degrading Mycobacterium isolates from soil. Microb Ecol. 2004;48:230-238.
Not in our library10.1007/s00248-003-1044-5
- 39.
Mishra HN, Das C. A review on biological control and metabolism of aflatoxin. Crit Rev Food Sci Nutr. 2003;43:245-264.
Not in our library10.1080/10408690390826518
- 40.
Murshudov GN, Vagin AA, Dodson EJ. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D. 1997;53:240-255.
Not in our library10.1107/s0907444996012255
Cited by papers we hold 4
- Improved production of the non-native cofactor F420 in Escherichia coli · 2021Not checked
- Mycotoxin Biotransformation by Native and Commercial Enzymes: Present and Future Perspectives · 2017No notice
- Impact of food processing and detoxification treatments on mycotoxin contamination · 2016No notice
- Aflatoxin B1 Degradation by a Pseudomonas Strain · 2014Not checked
Reads
Read by people on this page
None yet.
Checked or read by AI through naulon
None yet.
A person counts once a day per paper. We keep no cookie and no address: a reader is a hash that changes every day. Any month under five reads shows no number.
Are you an author?
Is this your paper?
Claim it to add your note and be paid when agents cite it. Free.