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Analysis of genotype effects for the immunosuppression via two-step method

Sheng Xiaona, Xie Wanqiu, Zhou Ying

BIO Web of Conferences · 2017

doi:10.1051/bioconf/20170802010 (opens in a new tab)

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Abstract

This paper studies the main effects and interactive effects between genes on immunosuppression susceptibility caused by ultraviolet radiation in population of mice. We present a two-step strategy, i.e., we first establish one full linear model based on all main effects and interactive effects, and use the Dantzig selector method to screen the genotype effects preliminary; then via the idea of stepwise regression, under the other model we further detect the significant main effects and interactive effects for the UV-induced immunosuppression susceptibility. The most significant main effect site that we identified is D10Mit170, and the most significant interactive sites are D6Mit389 and D16Mit131.

Abstract licence: CC BY

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