No retraction, correction or concern found when last checked on Oct 23, 2026.

Role of Flagella in the Pathogenesis of Helicobacter pylori

Haiying Gu

Current Microbiology · 2017 · Review

Abstract

This review aimed to investigate the role of Helicobacter pylori flagella on the pathogenicity of this bacterium in humans. Helicobacter pylori is a flagellated pathogen that colonizes the human gastroduodenal mucosa and produces inflammation, and is responsible for gastrointestinal disease. Its pathogenesis is attributed to colonization and virulence factors. The primary function of H. pylori flagella is to provide motility. We believe that H. pylori flagella play an important role in the colonization of the gastrointestinal mucosa. Therefore, we reviewed previous studies on flagellar morphology and motility in order to explore the relationship between H. pylori flagella and pathogenicity. Further investigation is required to confirm the association between flagella and pathogenicity in H. pylori.

Full text

From PubMed Central, U.S. National Library of Medicine, as current on Oct 23, 2026. Paragraph numbers are ours, so an answer can point at one.

Introduction

1Helicobacter pylori is a flagellated microaerophilic gram-negative bacillus that is known to colonize the gastrointestinal mucosa of almost half the global human population with varying prevalence rates across different geographical regions. Helicobacter pylori is perhaps the most infectious of all known bacteria. Although some believe that H. pylori is a type of “commensal bacterium”, it cannot be classified as normal flora because all patients with gastroduodenal H. pylori colonization show histological gastroenteritis, which can develop into a number of gastric diseases such as chronic gastritis, duodenitis, peptic ulcers (gastric and duodenal), mucosa-associated lymphoid tissue (MALT), atrophic gastritis, and gastric adenocarcinoma. This bacterium exhibits allelic diversity and genetic variability. Thus, infection might appear as a high rate of mixed infections, indicating that one person might be infected with multiple strains of H. pylori. The mixed infection rate is high in epidemic areas with a high incidence. The pathogenesis of H. pylori infection is partly dependent on colonization and virulence factors, and flagella play an important role in the colonization of the gastrointestinal mucosa. The difference (heterogeneity) in the motilities of colonizing strains was first reported by, but failed to attract much attention. The role of heterogeneity in the motility of H. pylori has not been sufficiently explored.

Morphology and Structure of H. pylori Flagella

2The bacterial flagellum is a complex motility organ composed of multiple types of protein subunits. Each flagellum consists of three components: the basal body, hook, and filament. Electron microscopic observation of the H. pylori flagellum reveals the presence of a sheath and a terminal bulb. The function of the membrane-like flagellar sheath of H. pylori is hitherto unknown, and little is known of its composition. Helicobacter pylori has 4–8 unipolar flagella; however, it remains controversial whether the flagella are uni- or bipolar. Table 1 presents the structural composition and functions of H. pylori flagellar structures.

Functions and Pathogenicity of H. pylori Flagella

3Helicobacter pylori flagella produce different types of motility, including “swimming motility,” “spreading motility,” and “swarming motility,” which are defined as movement in liquid media, movement in soft agar (0.3% agar concentration), and movement on the surface of semi-solid or solid media, respectively. Helicobacter pylori flagella may influence their colonization in bacteria, inflammation, and immune evasion.

Colonization

4The viability of H. pylori on the surface of the gastrointestinal mucosa depends on its colonization factors such as urease, motility, chemotaxis, outer membrane proteins, and the special helix morphology of the bacterium. The optimal pH of H. pylori is neutral, while the optimal pH of H. pylori in liquid media is 8.5 (slightly alkaline). Thus, the acidic environment of the stomach is not suitable for its growth. It is generally believed that urease plays a protective role in H. pylori, facilitating colonization of the mucosa of the stomach by hydrolyzing urea into NH3 and CO2. The NH3 produced by the action of urease neutralizes stomach acid and increases the pH of the surrounding cells. In addition, urease participates in the inflammatory reaction and facilitates adhesion by interacting with the CD74 receptor on gastric epithelial cells isolated urease-negative H. pylori mutants from patients with peptic ulcers, and found that this strain successfully colonized the stomach of Mongolian gerbils and caused ulcers; therefore, the role of urease as a colonization factor is uncertain. The importance of motility as a colonization factor in H. pylori was first demonstrated in the study by, who demonstrated that germ-free piglets exhibited a higher infection rate when infected with motile H. pylori than when infected with the non-motile strain; moreover, the motile strain also colonized the stomachs for a longer duration in the stomach of germ-free piglets. Similarly, many animal studies using motility-deficient mutants, including the H. pylori motB mutant, fliD mutant, putA mutant, and a chemotaxis mutant strain, have shown similar findings. The spreading motility of these mutant strains is weak and their colonization in the stomach of the animals was reduced. The most convincing evidence for the role of motility in H. pylori colonization came from the study by found that changes in flagellin glycosylation affected strain motility. When the glycosylation level of the FlaA protein was increased, the strain motility and colonization load both increased. These studies have convincingly indicated that flagellar motility is an important factor influencing colonization. The colonization of H. pylori is expressed as colonization density or load. The number of colonies per gram of gastric mucosa (CFU/g) is determined by quantitative culture. Helicobacter pylori DNA can be quantitatively measured by polymerase chain reaction (PCR).

5Motility is measured by three different methods. First, swimming motility can be directly determined by the average swimming velocity of bacteria in the gastric mucosal layer using phase-contrast microscopy. Second, spreading motility can be determined by assessing the growth ring diameter in semi-solid agar using puncture inoculation. Third, swarming motility can be determined by examining the growth ring diameter on the surface of semi-solid medium using quantitative inoculation. These studies showed that the H. pylori colonization load in gastric mucosa was positively correlated with motility in animal infection models.

Colonization Site

6Colonization by H. pylori is not evenly distributed. Colonization in the stomach is usually observed at the gastric antrum. However, H. pylori colonies can also be found in other sites. For example, H. pylori has been known to colonize the duodenum and is recognized as the primary cause of idiopathic duodenal ulcers. Although the incidence is low (6.9%), it can be assumed that the strains colonizing different gastrointestinal sites might have different origins, because H. pylori infection in the stomach has been demonstrated to be heterogeneous. Helicobacter pylori may also colonize the colon, but its origin remains unclear.

Immune Inflammation and Evasion

7The motility and colonization load of H. pylori are positively correlated with neutrophilin filtration. Colonization is the basis of the inflammatory reaction induced by H. pylori, and motility is a critical colonization determinant that affects the infection outcome. Furthermore, the flagellum also influences inflammation and immune evasion.

Immune Inflammation

8The main structural proteins of the H. pylori flagellum include HpaA, FlaA, FlaB, FliD, and FlgK. Of these, HpaA, FlaA, and FlaB have been found to be expressed in H. pylori strains isolated from biopsy specimens of patients with stomach disease. These flagellins are the primary targets of the humoral immunity after infection, and induce antibody responses. In contrast, an important study showed that FlaA was antigenic but not immunogenic. The role of H. pylori flagellins in immune inflammation is yet unknown.

Immune Evasion

9Helicobacter pylori infections usually occur during childhood and last for a lifetime if left untreated with antibiotics. The human immune system cannot eliminate these bacteria primarily because of the bacterial ability of immune evasion. Although H. pylori flagellin can induce anti-flagellin antibodies in infected patients, it is not recognized by toll-like receptor 5 (TLR5), a member of the toll-like receptor family, which is activated by most bacterial flagellins. One possible reason may be that the flagellins, especially FlaA, are not exposed, and thus cannot be detected in the infected gastric epithelial cells. Other bacterial flagella induce interleukin 8 (IL-8) secretion, leading to an inflammatory reaction. However, H. pylori flagellin does not typically induce IL-8 secretion in gastric epithelial cells. Although highly motile strains of H. pylori have been shown to elicit a higher level of IL-8 production, the flagellar sheath HpaA probably shields the flagellin from recognition by TLR5.

Relationship Between H. pylori Flagellar Structure, Motility, Chemotaxis, and Colonization

10In the flagellar structure, the C ring complex is composed of FliM, FliN, FliY, and FliG. Typically, fliM, fliY, and fliG mutant H. pylori strains cannot produce flagella. Although the fliN mutant strain can produce flagella, they are “paralyzed” and unable to move, resulting in a non-motile bacterium. In the flagellar structure, the “motor” is important for bacterial motility. motB-deficient H. pylori have been reported to exhibit normal flagellar structure but no motility, and the colonization load of this strain is significantly lower than controls containing motB in infected mice. fliF, fliS, flhB, fliQ, fliG, or fliI mutant strains did not produce any flagella and were non-motile, while the flhA mutant strain produced short flagella. FlgE is the main protein of the flagellar hook, and strains lacking the flgE gene expectedly showed no motility. FlaA and FlaB are the components of the flagellar filament and are important for motility. Strains lacking the flaA and flaB genes exhibit reduced irregular flagella and lower motility. The flaA and flaB double-mutant strain is completely non-motile. The flaA and flaB mutant strains have reduced colonizing ability, and cannot colonize even with a longer period of incubation in animal models. Mutation of the flagellar filament fliD gene results in non-motile bacteria with short flagella, and this strain is unable to colonize the gastric mucosa of mice. The FaaA protein is required for flagellar and proper flagellar localization as well as for optimal flagellar function. This protein is exported to the outer membrane and subsequently becomes a component of the flagellar sheath. Helicobacter pylori mutant strains deficient in faaA exhibited decreased motility and less efficient colonization of the stomach in mice compared to the wild-type H. pylori strain at the early stages of infection.

11Flagellar hook substructure reaches its optimal length sensed by the ‘checkpoint control’ protein FliK, export of the anti-sigma factor FlgM is triggered releasing σ28 from a σ28-FlgM complex which in turn allows the subsequent expression of σ28 dependent genes. In fliK, mutants hook to filament transition do not occur and long hooks of unregulated length termed polyhooks are formed. It is demonstrated that FliK is necessary for upregulation of cagA. Expression and flagellar regulatory system of H. pylori is directly required for upregulation of the major virulence gene cagA in gastric cell associated H. pylori.

12The direction of flagellar rotation is cooperatively controlled by the chemotaxis-signaling protein CheY and the flagellar rotor protein FliN. Strains with mutant chemotaxis genes cheW, cheV, cheY, cheA, and tlpB have less motility and reduced colonization load. In contrast, a study by Williams et al. demonstrated that chemotaxis gene mutants (ΔcheY, ΔcheW) displayed an adequate colonization load but a reduced inflammatory response. Reference investigated a new protein, ChePep, located in the flagellar pole, which regulates flagellar rotation and controls H. pylori chemotaxis. Strains with the ChePep gene mutation exhibited reduced flagellar motility.

13The only known phosphatase in H. pylori is CheZ, called CheZHP in this system. It is reported that CheZHP localization depends on the ChePep chemotaxis protein and conversely ChePep localization depends on CheZHP, which raises the intriguing possibility that some phosphatases, including CheZHP and ChePep, exist in a complex that is distinct from the core chemotaxis signaling and flagellar complexes.

14Reference demonstrated that the colonization of a TlpD-controlled chemotaxis gene mutant strain in the gastric antrum was significantly reduced. Similarly, it was found that the colonization of strains with chemotaxis gene mutants (ΔcheY) and especially the motility gene mutants (ΔmotB) was reduced. Future studies should clarify the relationship between chemotaxis and colonization.

15All members of the Epsilonproteobacteria have their flagella located at either one or both cellular poles. Campylobacter jejuni and Helicobacter pylori are the most studied epsilonproteobacteria because they are important human pathogens. In addition to their unique structural features revealed by cryoelectron tomography, Campylobacter and Helicobacter flagella exhibit unique aspects in the regulation of the expression of their flagellar genes and in the assembly of their flagellar structure. Regulation of flagellar gene expression in Campylobacter and Helicobacter is also unique, involving a two-component system (FlgRS), the FlhF GTPase, and the transcription factors σ54 and σ28.

Discussion

16Although many components of the H. pylori lagella have been characterized and data regarding flagellar function and regulation are rapidly increasing, certain aspects of the H. pylori system, in particular those that differ from the well-studied model systems, are still poorly understood and require further investigation. These regulatory mechanisms appear to act at the bottom of the putative transcriptional hierarchy that governs flagellar biosynthesis in H. pylori. In contrast, the mechanisms at the top of the hierarchy that actually trigger the initiation of flagellar gene transcription are completely unknown.

17Previous studies have explored the spreading and swarming motilities; however, whether these two types of motility are equivalent remains unclear.

18Adhesion is an important factor that mediates the pathogenic role of bacterial flagellum. However, unlike other bacteria, H. pylori adhesion on gastric epithelial cells is not dependent on flagellin and is not influenced by reduction in bacterial flagella. Moreover, it is related to mutations of flagellar genes. For example, the adhesion ability of a flaA::cat/flab::km mutant strain without flagella is adequate while that of the flbA mutant strain is significantly reduced.

19Exploring the relationship between H. pylori flagellar motility and gastrointestinal mucosa colonization can facilitate the understanding of H. pylori pathogenesis, especially the heterogeneity of motility in mixed infections, and needs to be further investigated.

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O’Neill J, Xie M, Hijnen M, Roujeinikova A. Role of the MotB linker in the assembly and activation of the bacterial flagellar motor. Acta Crystallogr D Biol Crystallogr. 2011;67(Pt 12):1009-1016.
Not in our library10.1107/s0907444911041102
60.
Osaki T, Hanawa T, Manzoku T, Fukuda M, Kawakami H, Suzuki H, Yamaguchi H, Yan X, Taguchi H, Kurata S, Kamiya S. Mutation of luxS affects motility and infectivity of Helicobacter pylori in gastric mucosa of a Mongolian gerbil model. J Med Microbiol. 2006;55(Pt 11):1477-1485.
Not in our library10.1099/jmm.0.46660-0
61.
O’Toole PW, Kostrzynska M, Trust TJ. Non-motile mutants of Helicobacter pylori and Helicobacter mustelae defective in flagellar hook production. Mol Microbiol. 1994;14(4):691-703.
Not in our library10.1111/j.1365-2958.1994.tb01307.x
62.
Ottemann KM, Lowenthal AC. Helicobacter pylori uses motility for initial colonization and to attain robust infection. Infect Immun. 2002;70(4):1984-1990.
Not in our library10.1128/iai.70.4.1984-1990.2002
63.
Pereira L, Hoover TR. Stable accumulation of sigma54 in Helicobacter pylori requires the novel protein HP0958. J Bacteriol. 2005;187:4463-4469.
Not in our library10.1128/jb.187.13.4463-4469.2005
64.
Pérez-Rodríguez I, Ricci J, Voordeckers JW, Starovoytov V, Vetriani C. Nautilia nitratireducens sp. nov., a thermophilic, anaerobic, chemosynthetic, nitrate-ammonifying bacterium isolated from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol. 2010;60:1182-1186.
Not in our library10.1099/ijs.0.013904-0
65.
Pietroiusti A, Forlini A, Magrini A, Galante A, Bergamaschi A. Isolated Helicobacter pylori duodenal colonization and idiopathic duodenal ulcers. Am J Gastroenterol. 2008;103(1):55-61.
Not in our library10.1111/j.1572-0241.2007.01506.x
66.
Pietroiusti A, Luzzi I, Gomez MJ, Magrini A, Bergamaschi A, Forlini A, Galante A. Helicobacter pylori duodenal colonization is a strong risk factor for the development of duodenal ulcer. Aliment Pharmacol Ther. 2005;21(7):909-915.
Not in our library10.1111/j.1365-2036.2005.02423.x
67.
Pittman MS, Goodwin M, Kelly DJ. Chemotaxis in the human gastric pathogen Helicobacter pylori: different roles for CheW and the three CheV paralogues, and evidence for CheV2 phosphorylation. Microbiology. 2001;147(Pt 9):2493-2504.
Not in our library10.1099/00221287-147-9-2493
68.
Flagellar Localization of a <named-content content-type="genus-species">Helicobacter pylori</named-content> Autotransporter Protein · 2013
Not checked
69.
Virulence Factors of A Review · 2014
Not checked
70.
Rolig AS, Shanks J, Carter JE, Ottemann KM. Helicobacter pylori requires TlpD-driven chemotaxis to proliferate in the antrum. Infect Immun. 2012;80(10):3713-3720.
Not in our library10.1128/iai.00407-12
71.
Ryan KA, Karim N, Worku M, Penn CW, O’Toole PW. Helicobacter pylori flagellar hook-filament transition is controlled by a FliK functional homolog encoded by the gene HP0906. J Bacteriol. 2005;187(16):5742-5750.
Not in our library10.1128/jb.187.16.5742-5750.2005
72.
Sanders CJ, Yu Y, Moore DA, Williams IR, Gewirtz AT. Humoral immune response to flagellin requires T cells and activation of innate immunity. J Immunol. 2006;177(5):2810-2818.
Not in our library10.4049/jimmunol.177.5.2810
73.
Schuster SC, Baeuerlein E. Location of the basal disk and a ringlike cytoplasmic structure, two additional structures of the flagellar apparatus of Wolinella succinogenes. J Bacteriol. 1992;174:263-268.
Not in our library10.1128/jb.174.1.263-268.1992
74.
Scott DR, Weeks D, Hong C, Postius S, Melchers K, Sachs G. The role of internal urease in acid resistance of Helicobacter pylori. Gastroenterology. 1998;114(1):58-70.
Not in our library10.1016/s0016-5085(98)70633-x
75.
Sikorski J, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Bruce D, Goodwin L, Pitluck S, Ovchinnikova G, Pati A, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Chain P, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Detter JC, Han C, Rohde M, Lang E, Spring S, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Complete genome sequence of Sulfurospirillum deleyianum type strain (5175). Stand Genom Sci. 2010;2:149-157.
Not in our library10.4056/sigs.671209
76.
Slonczewski JL, McGee DJ, Phillips J, Kirkpatrick C, Mobley HL. pH-dependent protein profiles of Helicobacter pylori analyzed by two-dimensional gels. Helicobacter. 2000;5(4):240-247.
Not in our library10.1046/j.1523-5378.2000.00037.x
77.
Smith TG, Pereira L, Hoover TR. Helicobacter pylori FlhB processing-deficient variants affect flagellar assembly but not flagellar gene expression. Microbiology. 2009;155(Pt 4):1170-1180.
Not in our library10.1099/mic.0.022806-0
78.
Multiple Peptidoglycan Modification Networks Modulate Helicobacter pylori's Cell Shape, Motility, and Colonization Potential · 2012
No notice
79.
Tang RX, Luo DJ, Sun AH, Yan J. Diversity of Helicobacter pylori isolates in expression of antigens and induction of antibodies. World J Gastroenterol. 2008;14(30):4816-4822.
Not in our library10.3748/wjg.14.4816
80.
Terry K, Williams SM, Connolly L, Ottemann KM. Chemotaxis plays multiple roles during Helicobacter pylori animal infection. Infect Immun. 2005;73(2):803-811.
Not in our library10.1128/iai.73.2.803-811.2005
81.
Thomson JM, Hansen R, Berry SH, Hope ME, Murray GI, Mukhopadhya I, McLean MH, Shen Z, Fox JG, El-Omar E, Hold GL. Enterohepatic helicobacter in ulcerative colitis: potential pathogenic entities? PLoS ONE. 2011;6(2):e17184.
Not in our library10.1371/journal.pone.0017184
82.
Tsang J, Smith TG, Pereira LE, Hoover TR. Insertion mutations in Helicobacter pylori flhA reveal strain differences in RpoN-dependent gene expression. Microbiology. 2013;159(Pt 1):58-67.
Not in our library10.1099/mic.0.059063-0
83.
Williams SM, Chen YT, Andermann TM, Carter JE, McGee DJ, Ottemann KM. Helicobacter pylori chemotaxis modulates inflammation and bacterium-gastric epithelium interactions in infected mice. Infect Immun. 2007;75(8):3747-3757.
Not in our library10.1128/iai.00082-07
84.
Wirsen CO, Sievert SM, Cavanaugh CM, Molyneaux SJ, Ahmad A, Taylor LT, DeLong EF, Taylor CD. Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur. Appl Environ Microbiol. 2002;68:316-325.
Not in our library10.1128/aem.68.1.316-325.2002
85.
Zhang J, Qian J, Zhang X, Zou Q. Outer membrane inflammatory protein A, a new virulence factor involved in the pathogenesis of Helicobacter pylori. Mol Biol Rep. 2014;41(12):7807-7814.
Not in our library10.1007/s11033-014-3673-9

Cited by papers we hold 1

Helicobacter pylori Virulence Factors—Mechanisms of Bacterial Pathogenicity in the Gastric Microenvironment · 2020
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