No retraction, correction or concern found when last checked on Nov 4, 2026.
Concise Review: Isoforms of OCT4 Contribute to the Confusing Diversity in Stem Cell Biology
Xia Wang, Jianwu Dai
Stem Cells · 2010 · Review
Abstract
The human OCT4 gene can generate at least three transcripts (OCT4A, OCT4B, and OCT4B1) and four protein isoforms (OCT4A, OCT4B-190, OCT4B-265, and OCT4B-164) by alternative splicing and alternative translation initiation. OCT4A is a transcription factor responsible for the pluripotency properties of embryonic stem (ES) cells. While OCT4B cannot sustain ES cell self-renewal, it may respond to cell stresses. Yet, the function of OCT4B1 is still unclear. Lack of distinction of OCT4 isoforms could lead to confusions and controversies on OCT4 in various tissues and cells. One important issue we emphasize in this review article is that alternatively spliced transcripts and alternative translation products of OCT4 exhibit diverse expression patterns and functions. Furthermore, simple approaches and methods to detect and distinguish OCT4 isoforms are discussed. This article underscores the importance of identifying and discriminating the expression and functions of OCT4 isoforms in stem cell research.
Shown for reading. Its publisher allows quoting it, not republishing it.
References 85
- 1.
Murry CE, Keller G. Differentiation of embryonic stem cells to clinically relevant populations: Lessons from embryonic development. Cell. 2008;132:661-680.
Not in our library10.1016/j.cell.2008.02.008
- 2.
Weissman IL. Translating stem and progenitor cell biology to the clinic: Barriers and opportunities. Science (New York, NY). 2000;287:1442-1446.
Not in our library10.1126/science.287.5457.1442
- 3.
Yamanaka S. A fresh look at iPS cells. Cell. 2009;137:13-17.
Not in our library10.1016/j.cell.2009.03.034
- 4.
Nichols J, Zevnik B, Anastassiadis K, et al. Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4. Cell. 1998;95:379-391.
Not in our library10.1016/s0092-8674(00)81769-9
- 5.
Niwa H, Miyazaki J, Smith AG. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat Genet. 2000;24:372-376.
Not in our library10.1038/74199
- 6.
Boyer LA, Lee TI, Cole MF, et al. Core transcriptional regulatory circuitry in human embryonic stem cells. Cell. 2005;122:947-956.
Not in our library10.1016/j.cell.2005.08.020
- 7.
Yu J, Vodyanik MA, Smuga-Otto K, et al. Induced pluripotent stem cell lines derived from human somatic cells. Science (New York, NY). 2007;318:1917-1920.
Not in our library10.1126/science.1151526
- 8.
Takahashi K, Tanabe K, Ohnuki M, et al. Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell. 2007;131:861-872.
Not in our library10.1016/j.cell.2007.11.019
- 9.
Park IH, Zhao R, West JA, et al. Reprogramming of human somatic cells to pluripotency with defined factors. Nature. 2008;451:141-146.
Not in our library10.1038/nature06534
- 10.
Takeda J, Seino S, Bell GI. Human Oct3 gene family: cDNA sequences, alternative splicing, gene organization, chromosomal location, and expression at low levels in adult tissues. Nucleic Acids Res. 1992;20:4613-4620.
Not in our library10.1093/nar/20.17.4613
- 11.
Atlasi Y, Mowla SJ, Ziaee SA, et al. OCT4 spliced variants are differentially expressed in human pluripotent and nonpluripotent cells. Stem Cells. 2008;26:3068-3074.
Not in our library10.1634/stemcells.2008-0530
- 12.
Lee J, Kim HK, Rho JY, et al. The human OCT-4 isoforms differ in their ability to confer self-renewal. J Biol Chem. 2006;281:33554-33565.
Not in our library10.1074/jbc.m603937200
- 13.
Abdel-Rahman B, Fiddler M, Rappolee D, et al. Expression of transcription regulating genes in human preimplantation embryos. Hum Reprod (Oxford, England). 1995;10:2787-2792.
Not in our library10.1093/oxfordjournals.humrep.a135792
- 14.
Hansis C, Grifo JA, Krey LC. Oct-4 expression in inner cell mass and trophectoderm of human blastocysts. Mol Hum Reprod. 2000;6:999-1004.
Not in our library10.1093/molehr/6.11.999
- 15.
Richards M, Tan SP, Tan JH, et al. The transcriptome profile of human embryonic stem cells as defined by SAGE. Stem Cells. 2004;22:51-64.
Not in our library10.1634/stemcells.22-1-51
- 16.
Hay DC, Sutherland L, Clark J, et al. Oct-4 knockdown induces similar patterns of endoderm and trophoblast differentiation markers in human and mouse embryonic stem cells. Stem Cells. 2004;22:225-235.
Not in our library10.1634/stemcells.22-2-225
- 17.
Matin MM, Walsh JR, Gokhale PJ, et al. Specific knockdown of Oct4 and beta2-microglobulin expression by RNA interference in human embryonic stem cells and embryonic carcinoma cells. Stem Cells (Dayton, OH). 2004;22:659-668.
Not in our library10.1634/stemcells.22-5-659
- 18.
Cauffman G, Van de Velde H, Liebaers I, et al. Oct-4 mRNA and protein expression during human preimplantation development. Mol Hum Reprod. 2005;11:173-181.
Not in our library10.1093/molehr/gah155
- 19.
Cauffman G, Liebaers I, Van Steirteghem A, et al. POU5F1 isoforms show different expression patterns in human embryonic stem cells and preimplantation embryos. Stem Cells (Dayton, OH). 2006;24:2685-2691.
Not in our library10.1634/stemcells.2005-0611
- 20.
Wang X, Zhao Y, Xiao Z, et al. Alternative translation of OCT4 by an internal ribosome entry site and its novel function in stress response. Stem Cells. 2009;27:1265-1275.
Not in our library10.1002/stem.58
- 21.
Papamichos SI, Kotoula V, Tarlatzis BC, et al. OCT4B1 isoform: the novel OCT4 alternative spliced variant as a putative marker of stemness. Mol Hum Reprod. 2009;15:269-270.
Not in our library10.1093/molehr/gap018
- 22.
Zaehres H, Lensch MW, Daheron L, et al. High-efficiency RNA interference in human embryonic stem cells. Stem Cells (Dayton, OH). 2005;23:299-305.
Not in our library10.1634/stemcells.2004-0252
- 23.
Lengner CJ, Camargo FD, Hochedlinger K, et al. Oct4 expression is not required for mouse somatic stem cell self-renewal. Cell Stem Cell. 2007;1:403-415.
Not in our library10.1016/j.stem.2007.07.020
- 24.
Zangrossi S, Marabese M, Broggini M, et al. Oct-4 expression in adult human differentiated cells challenges its role as a pure stem cell marker. Stem Cells. 2007;25:1675-1680.
Not in our library10.1634/stemcells.2006-0611
- 25.
Tai MH, Chang CC, Kiupel M, et al. Oct4 expression in adult human stem cells: Evidence in support of the stem cell theory of carcinogenesis. Carcinogenesis. 2005;26:495-502.
Not in our library10.1093/carcin/bgh321
- 26.
Liedtke S, Enczmann J, Waclawczyk S, et al. Oct4 and its pseudogenes confuse stem cell research. Cell Stem Cell. 2007;1:364-366.
Not in our library10.1016/j.stem.2007.09.003
- 27.
Liedtke S, Stephan M, Kogler G. Oct4 expression revisited: Potential pitfalls for data misinterpretation in stem cell research. Biol Chem. 2008;389:845-850.
Not in our library10.1515/bc.2008.098
- 28.
de Jong J, Looijenga LH. Stem cell marker OCT3/4 in tumor biology and germ cell tumor diagnostics: History and future. Crit Rev Oncog. 2006;12:171-203.
Not in our library10.1615/critrevoncog.v12.i3-4.10
- 29.
Lengner CJ, Welstead GG, Jaenisch R. The pluripotency regulator Oct4: A role in somatic stem cells? Cell Cycle (Georgetown, TX). 2008;7:725-728.
Not in our library10.4161/cc.7.6.5573
- 30.
Kotoula V, Papamichos SI, Lambropoulos AF. Revisiting OCT4 expression in peripheral blood mononuclear cells. Stem Cells. 2008;26:290-291.
Not in our library10.1634/stemcells.2007-0726
- 31.
Cesselli D, Beltrami AP, Rigo S, et al. Multipotent progenitor cells are present in human peripheral blood. Circ Res. 2009;104:1225-1234.
Not in our library10.1161/circresaha.109.195859
- 32.
Chang CC, Shieh GS, Wu P, et al. Oct-3/4 expression reflects tumor progression and regulates motility of bladder cancer cells. Cancer Res. 2008;68:6281-6291.
Not in our library10.1158/0008-5472.can-08-0094
- 33.
Hu T, Liu S, Breiter DR, et al. Octamer 4 small interfering RNA results in cancer stem cell-like cell apoptosis. Cancer Res. 2008;68:6533-6540.
Not in our library10.1158/0008-5472.can-07-6642
- 34.
Krishnan BR, Jamry I, Chaplin DD. Feature mapping of the HLA class I region: Localization of the POU5F1 and TCF19 genes. Genomics. 1995;30:53-58.
Not in our library10.1006/geno.1995.0008
- 35.
Guillaudeux T, Mattei MG, Depetris D, et al. In situ hybridization localizes the human OTF3 to chromosome 6p21.3→p22 and OTF3L to 12p13. Cytogenet Cell Genet. 1993;63:212-214.
Not in our library10.1159/000133537
- 36.
Herr W, Cleary MA. The POU domaVersatility in transcriptional regulation by a flexible two-in-one DNA-binding domain. Genes Dev. 1995;9:1679-1693.
Not in our library10.1101/gad.9.14.1679
- 37.
Sturm RA, Herr W. The POU domain is a bipartite DNA-binding structure. Nature. 1988;336:601-604.
Not in our library10.1038/336601a0
- 38.
Brehm A, Ohbo K, Scholer H. The carboxy-terminal transactivation domain of Oct-4 acquires cell specificity through the POU domain. Mol Cell Biol. 1997;17:154-162.
Not in our library10.1128/mcb.17.1.154
- 39.
Pain D, Chirn GW, Strassel C, et al. Multiple retropseudogenes from pluripotent cell-specific gene expression indicates a potential signature for novel gene identification. J Biol Chem. 2005;280:6265-6268.
Not in our library10.1074/jbc.c400587200
- 40.
Harrison PM, Zheng D, Zhang Z, et al. Transcribed processed pseudogenes in the human genome: An intermediate form of expressed retrosequence lacking protein-coding ability. Nucleic Acids Res. 2005;33:2374-2383.
Not in our library10.1093/nar/gki531
Cited by papers we hold 3
Reads
Read by people on this page
None yet.
Checked or read by AI through naulon
None yet.
A person counts once a day per paper. We keep no cookie and no address: a reader is a hash that changes every day. Any month under five reads shows no number.
Are you an author?
Is this your paper?
Claim it to add your note and be paid when agents cite it. Free.